RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 NBPF10Q6P3W6 841 aaKnown RBP10.21□□□□□ -0.77
CCDC47-205ENST00000582331 NBPF15Q8N660 670 aa10.21□□□□□ -0.77
CCDC47-205ENST00000582331 SPOCK2Q92563 424 aa10.21□□□□□ -0.77
CCDC47-205ENST00000582331 GPRC5DQ9NZD1 345 aa10.21□□□□□ -0.77
CCDC47-205ENST00000582331 COL4A5P29400 1685 aa10.21□□□□□ -0.78
CCDC47-205ENST00000582331 TTLL13PA6NNM8 815 aa10.2□□□□□ -0.78
CCDC47-205ENST00000582331 TCERG1O14776 1098 aaKnown RBP10.2□□□□□ -0.78
CCDC47-205ENST00000582331 PYGBP11216 843 aa10.2□□□□□ -0.78
CCDC47-205ENST00000582331 CC2D1BQ5T0F9 858 aaKnown RBP10.2□□□□□ -0.78
CCDC47-205ENST00000582331 NUTM1Q86Y26 1132 aa10.2□□□□□ -0.78
CCDC47-205ENST00000582331 CRAMP1Q96RY5 1269 aa10.2□□□□□ -0.78
CCDC47-205ENST00000582331 GLIS2Q9BZE0 524 aaPredicted RBP10.2□□□□□ -0.78
CCDC47-205ENST00000582331 TMX4Q9H1E5 349 aaPredicted RBP10.2□□□□□ -0.78
CCDC47-205ENST00000582331 CASP8AP2Q9UKL3 1982 aa10.2□□□□□ -0.78
CCDC47-205ENST00000582331 PPEF1O14829 653 aaPredicted RBP10.19□□□□□ -0.78
CCDC47-205ENST00000582331 PPIP5K2O43314 1243 aa10.19□□□□□ -0.78
CCDC47-205ENST00000582331 CXCL9Q07325 125 aa10.19□□□□□ -0.78
CCDC47-205ENST00000582331 NOGQ13253 232 aa10.19□□□□□ -0.78
CCDC47-205ENST00000582331 RBM17Q96I25 401 aaKnown RBP10.19□□□□□ -0.78
CCDC47-205ENST00000582331 PHACTR3Q96KR7 559 aa10.19□□□□□ -0.78
CCDC47-205ENST00000582331 VPS33BQ9H267 617 aa10.19□□□□□ -0.78
CCDC47-205ENST00000582331 ZNF408Q9H9D4 720 aa10.19□□□□□ -0.78
CCDC47-205ENST00000582331 PGAP2Q9UHJ9 254 aa10.19□□□□□ -0.78
CCDC47-205ENST00000582331 ABCC12Q96J65 1359 aa10.18□□□□□ -0.78
CCDC47-205ENST00000582331 NPC1L1Q9UHC9 1359 aa10.18□□□□□ -0.78
CCDC47-205ENST00000582331 KIF7Q2M1P5 1343 aa10.18□□□□□ -0.78
CCDC47-205ENST00000582331 ERVV-1B6SEH8 477 aa10.18□□□□□ -0.78
CCDC47-205ENST00000582331 GMPSP49915 693 aaPredicted RBP10.18□□□□□ -0.78
CCDC47-205ENST00000582331 AOC3Q16853 763 aa10.18□□□□□ -0.78
CCDC47-205ENST00000582331 CDC37L1Q7L3B6 337 aa10.18□□□□□ -0.78
CCDC47-205ENST00000582331 NGEFQ8N5V2 710 aa10.18□□□□□ -0.78
CCDC47-205ENST00000582331 ZC3H15Q8WU90 426 aaKnown RBP10.18□□□□□ -0.78
CCDC47-205ENST00000582331 RTF1Q92541 710 aaKnown RBP10.18□□□□□ -0.78
CCDC47-205ENST00000582331 ZNRF3Q9ULT6 936 aa10.18□□□□□ -0.78
CCDC47-205ENST00000582331 PER1O15534 1290 aaPredicted RBP10.17□□□□□ -0.78
CCDC47-205ENST00000582331 CHRM1P11229 460 aaPredicted RBP10.17□□□□□ -0.78
CCDC47-205ENST00000582331 PRKAR2BP31323 418 aa10.17□□□□□ -0.78
CCDC47-205ENST00000582331 SOX10P56693 466 aa10.17□□□□□ -0.78
CCDC47-205ENST00000582331 SUPT20HQ8NEM7 779 aa10.17□□□□□ -0.78
CCDC47-205ENST00000582331 ZIC5Q96T25 663 aa10.17□□□□□ -0.78
CCDC47-205ENST00000582331 COL3A1P02461 1466 aaPredicted RBP10.17□□□□□ -0.78
CCDC47-205ENST00000582331 MAP3K15Q6ZN16 1313 aa10.16□□□□□ -0.78
CCDC47-205ENST00000582331 POTEB2H3BUK9 544 aa10.16□□□□□ -0.78
CCDC47-205ENST00000582331 GPTP24298 496 aa10.16□□□□□ -0.78
CCDC47-205ENST00000582331 HIRAP54198 1017 aaPredicted RBP10.16□□□□□ -0.78
CCDC47-205ENST00000582331 HUNKP57058 714 aa10.16□□□□□ -0.78
CCDC47-205ENST00000582331 TNIP1Q15025 636 aa10.16□□□□□ -0.78
CCDC47-205ENST00000582331 SUSD4Q5VX71 490 aa10.16□□□□□ -0.78
CCDC47-205ENST00000582331 KIF6Q6ZMV9 814 aa10.16□□□□□ -0.78
CCDC47-205ENST00000582331 MCM10Q7L590 875 aa10.16□□□□□ -0.78
CCDC47-205ENST00000582331 SLC51AQ86UW1 340 aa10.16□□□□□ -0.78
CCDC47-205ENST00000582331 BCL2L13Q9BXK5 485 aa10.16□□□□□ -0.78
CCDC47-205ENST00000582331 RSPH6AQ9H0K4 717 aa10.16□□□□□ -0.78
CCDC47-205ENST00000582331 ATP6V0A2Q9Y487 856 aa10.16□□□□□ -0.78
CCDC47-205ENST00000582331 RIC1Q4ADV7 1423 aa10.16□□□□□ -0.78
CCDC47-205ENST00000582331 CDHR2Q9BYE9 1310 aa10.15□□□□□ -0.78
CCDC47-205ENST00000582331 CLSPNQ9HAW4 1339 aa10.15□□□□□ -0.78
CCDC47-205ENST00000582331 CNGB1Q14028 1251 aaPredicted RBP10.15□□□□□ -0.78
CCDC47-205ENST00000582331 TAF7Q15545 349 aaPredicted RBP10.15□□□□□ -0.78
CCDC47-205ENST00000582331 IER5LQ5T953 404 aa10.15□□□□□ -0.78
CCDC47-205ENST00000582331 PRPF38BQ5VTL8 546 aaKnown RBP10.15□□□□□ -0.78
CCDC47-205ENST00000582331 USP48Q86UV5 1035 aa10.15□□□□□ -0.78
CCDC47-205ENST00000582331 NLRP3Q96P20 1036 aa10.15□□□□□ -0.78
CCDC47-205ENST00000582331 RTFDC1Q9BY42 306 aaPredicted RBP10.15□□□□□ -0.78
CCDC47-205ENST00000582331 SAGE1Q9NXZ1 904 aa10.15□□□□□ -0.78
CCDC47-205ENST00000582331 IBTKQ9P2D0 1353 aaPredicted RBP10.14□□□□□ -0.79
CCDC47-205ENST00000582331 H7C1D1 291 aa10.14□□□□□ -0.79
CCDC47-205ENST00000582331 HTATSF1O43719 755 aaKnown RBP10.14□□□□□ -0.79
CCDC47-205ENST00000582331 RAD17O75943 681 aa10.14□□□□□ -0.79
CCDC47-205ENST00000582331 KIF23Q02241 960 aaPredicted RBP10.14□□□□□ -0.79
CCDC47-205ENST00000582331 DCTN1Q14203 1278 aa10.14□□□□□ -0.79
CCDC47-205ENST00000582331 RGMBQ6NW40 437 aa10.14□□□□□ -0.79
CCDC47-205ENST00000582331 DPP8Q6V1X1 898 aaPredicted RBP10.14□□□□□ -0.79
CCDC47-205ENST00000582331 TTLL7Q6ZT98 887 aa10.14□□□□□ -0.79
CCDC47-205ENST00000582331 TRPM4Q8TD43 1214 aa10.14□□□□□ -0.79
CCDC47-205ENST00000582331 CCDC102AQ96A19 550 aa10.14□□□□□ -0.79
CCDC47-205ENST00000582331 CNOT7Q9UIV1 285 aaKnown RBP10.14□□□□□ -0.79
CCDC47-205ENST00000582331 TRIM35Q9UPQ4 493 aa10.14□□□□□ -0.79
CCDC47-205ENST00000582331 RRP7AQ9Y3A4 280 aaKnown RBP10.14□□□□□ -0.79
CCDC47-205ENST00000582331 UBN2Q6ZU65 1347 aa10.13□□□□□ -0.79
CCDC47-205ENST00000582331 FAM155AB1AL88 458 aaPredicted RBP10.13□□□□□ -0.79
CCDC47-205ENST00000582331 TRPA1O75762 1119 aa10.13□□□□□ -0.79
CCDC47-205ENST00000582331 BBOX1O75936 387 aa10.13□□□□□ -0.79
CCDC47-205ENST00000582331 NTSR2O95665 410 aa10.13□□□□□ -0.79
CCDC47-205ENST00000582331 C3orf67Q6ZVT6 689 aa10.13□□□□□ -0.79
CCDC47-205ENST00000582331 PPP1R42Q7Z4L9 355 aa10.13□□□□□ -0.79
CCDC47-205ENST00000582331 ZNF467Q7Z7K2 595 aaPredicted RBP10.13□□□□□ -0.79
CCDC47-205ENST00000582331 ZNF34Q8IZ26 560 aa10.13□□□□□ -0.79
CCDC47-205ENST00000582331 MPNDQ8N594 471 aa10.13□□□□□ -0.79
CCDC47-205ENST00000582331 C2orf69Q8N8R5 385 aa10.13□□□□□ -0.79
CCDC47-205ENST00000582331 CFAP53Q96M91 514 aa10.13□□□□□ -0.79
CCDC47-205ENST00000582331 TMEM106CQ9BVX2 250 aa10.13□□□□□ -0.79
CCDC47-205ENST00000582331 ZBTB3Q9H5J0 574 aa10.13□□□□□ -0.79
CCDC47-205ENST00000582331 RNF186Q9NXI6 227 aa10.13□□□□□ -0.79
CCDC47-205ENST00000582331 MIS18AQ9NYP9 233 aa10.13□□□□□ -0.79
CCDC47-205ENST00000582331 NUDCQ9Y266 331 aa10.13□□□□□ -0.79
CCDC47-205ENST00000582331 NUP98P52948 1817 aa10.12□□□□□ -0.79
CCDC47-205ENST00000582331 MYL6BP14649 208 aa10.12□□□□□ -0.79
CCDC47-205ENST00000582331 ZNF157P51786 506 aaPredicted RBP10.12□□□□□ -0.79
CCDC47-205ENST00000582331 KIAA2012Q0VF49 1180 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms