RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 FOXO4P98177 505 aa27.46■■□□□ 1.99
CCDC47-204ENST00000582252 KLHDC4Q8TBB5 520 aa27.46■■□□□ 1.99
CCDC47-204ENST00000582252 IL17RAQ96F46 866 aa27.46■■□□□ 1.99
CCDC47-204ENST00000582252 HSP90AB3PQ58FF7 597 aa27.45■■□□□ 1.99
CCDC47-204ENST00000582252 KIAA1211Q6ZU35 1233 aa27.45■■□□□ 1.99
CCDC47-204ENST00000582252 CCDC8Q9H0W5 538 aaPredicted RBP27.45■■□□□ 1.99
CCDC47-204ENST00000582252 DEKP35659 375 aaKnown RBP27.44■■□□□ 1.98
CCDC47-204ENST00000582252 DZIP3Q86Y13 1208 aaKnown RBP27.44■■□□□ 1.98
CCDC47-204ENST00000582252 ARXQ96QS3 562 aa27.44■■□□□ 1.98
CCDC47-204ENST00000582252 CHMP3Q9Y3E7 222 aa27.44■■□□□ 1.98
CCDC47-204ENST00000582252 PLSCR1O15162 318 aa27.43■■□□□ 1.98
CCDC47-204ENST00000582252 BCORQ6W2J9 1755 aa27.43■■□□□ 1.98
CCDC47-204ENST00000582252 RAD50Q92878 1312 aa27.43■■□□□ 1.98
CCDC47-204ENST00000582252 ERVV-1B6SEH8 477 aa27.42■■□□□ 1.98
CCDC47-204ENST00000582252 TNNI3KQ59H18 835 aa27.42■■□□□ 1.98
CCDC47-204ENST00000582252 FPGT-TNNI3KV9GXZ4 949 aa27.42■■□□□ 1.98
CCDC47-204ENST00000582252 GIGYF2Q6Y7W6 1299 aaKnown RBP27.41■■□□□ 1.98
CCDC47-204ENST00000582252 APBA3O96018 575 aa27.4■■□□□ 1.98
CCDC47-204ENST00000582252 HSPA4P34932 840 aa27.4■■□□□ 1.98
CCDC47-204ENST00000582252 TFCP2Q12800 502 aa27.4■■□□□ 1.98
CCDC47-204ENST00000582252 LRRC4BQ9NT99 713 aa27.4■■□□□ 1.98
CCDC47-204ENST00000582252 RPS6KA4O75676 772 aa27.39■■□□□ 1.98
CCDC47-204ENST00000582252 PCCAP05165 728 aaPredicted RBP27.39■■□□□ 1.98
CCDC47-204ENST00000582252 CWC27Q6UX04 472 aaKnown RBP27.39■■□□□ 1.98
CCDC47-204ENST00000582252 UBR3Q6ZT12 1888 aa27.39■■□□□ 1.98
CCDC47-204ENST00000582252 IL15P40933 162 aaPredicted RBP27.38■■□□□ 1.97
CCDC47-204ENST00000582252 GPR108Q9NPR9 543 aa27.38■■□□□ 1.97
CCDC47-204ENST00000582252 TBC1D2BQ9UPU7 963 aa27.38■■□□□ 1.97
CCDC47-204ENST00000582252 GNPATO15228 680 aa27.38■■□□□ 1.97
CCDC47-204ENST00000582252 TXNRD1Q16881 649 aa27.38■■□□□ 1.97
CCDC47-204ENST00000582252 TLR7Q9NYK1 1049 aaKnown RBP27.38■■□□□ 1.97
CCDC47-204ENST00000582252 SCN7AQ01118 1682 aa27.38■■□□□ 1.97
CCDC47-204ENST00000582252 ATP5JP18859 108 aa27.37■■□□□ 1.97
CCDC47-204ENST00000582252 NEK4P51957 841 aa27.37■■□□□ 1.97
CCDC47-204ENST00000582252 PLA2G12BQ9BX93 195 aa27.37■■□□□ 1.97
CCDC47-204ENST00000582252 LSG1Q9H089 658 aaKnown RBP27.37■■□□□ 1.97
CCDC47-204ENST00000582252 CWC22Q9HCG8 908 aaKnown RBP27.37■■□□□ 1.97
CCDC47-204ENST00000582252 FBXO3Q9UK99 471 aa27.37■■□□□ 1.97
CCDC47-204ENST00000582252 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.37■■□□□ 1.97
CCDC47-204ENST00000582252 CIAO1O76071 339 aa27.36■■□□□ 1.97
CCDC47-204ENST00000582252 AK7Q96M32 723 aa27.36■■□□□ 1.97
CCDC47-204ENST00000582252 RTCBQ9Y3I0 505 aaKnown RBP27.36■■□□□ 1.97
CCDC47-204ENST00000582252 HLFQ16534 295 aa27.36■■□□□ 1.97
CCDC47-204ENST00000582252 ZBTB38Q8NAP3 1195 aaPredicted RBP27.36■■□□□ 1.97
CCDC47-204ENST00000582252 BOLA2Q9H3K6 86 aa27.36■■□□□ 1.97
CCDC47-204ENST00000582252 RFX7Q2KHR2 1363 aa27.35■■□□□ 1.97
CCDC47-204ENST00000582252 C4AP0C0L4 1744 aa27.35■■□□□ 1.97
CCDC47-204ENST00000582252 MCM4P33991 863 aa27.35■■□□□ 1.97
CCDC47-204ENST00000582252 RAB3GAP1Q15042 981 aa27.35■■□□□ 1.97
CCDC47-204ENST00000582252 IL25Q9H293 177 aa27.35■■□□□ 1.97
CCDC47-204ENST00000582252 PALD1Q9ULE6 856 aa27.35■■□□□ 1.97
CCDC47-204ENST00000582252 CDHR2Q9BYE9 1310 aa27.35■■□□□ 1.97
CCDC47-204ENST00000582252 CAMTA2O94983 1202 aa27.34■■□□□ 1.97
CCDC47-204ENST00000582252 GBP4Q96PP9 640 aa27.34■■□□□ 1.97
CCDC47-204ENST00000582252 FSD1Q9BTV5 496 aa27.34■■□□□ 1.97
CCDC47-204ENST00000582252 DBNLQ9UJU6 430 aaKnown RBP27.34■■□□□ 1.97
CCDC47-204ENST00000582252 DDX11L8A8MPP1 907 aa27.33■■□□□ 1.97
CCDC47-204ENST00000582252 EYA2O00167 538 aa27.33■■□□□ 1.97
CCDC47-204ENST00000582252 RGL2O15211 777 aa27.33■■□□□ 1.97
CCDC47-204ENST00000582252 CCDC57Q2TAC2 916 aa27.33■■□□□ 1.97
CCDC47-204ENST00000582252 PROM2Q8N271 834 aa27.33■■□□□ 1.96
CCDC47-204ENST00000582252 FOXD4L1Q9NU39 408 aa27.33■■□□□ 1.96
CCDC47-204ENST00000582252 ZNF652Q9Y2D9 606 aa27.33■■□□□ 1.96
CCDC47-204ENST00000582252 PTMSP20962 102 aa27.32■■□□□ 1.96
CCDC47-204ENST00000582252 GSE1Q14687 1217 aa27.32■■□□□ 1.96
CCDC47-204ENST00000582252 NUCB2P80303 420 aa27.31■■□□□ 1.96
CCDC47-204ENST00000582252 ATG9AQ7Z3C6 839 aa27.31■■□□□ 1.96
CCDC47-204ENST00000582252 ADRA2BP18089 450 aa27.3■■□□□ 1.96
CCDC47-204ENST00000582252 SNRKQ9NRH2 765 aa27.3■■□□□ 1.96
CCDC47-204ENST00000582252 MYH3P11055 1940 aa27.3■■□□□ 1.96
CCDC47-204ENST00000582252 CLEC4GQ6UXB4 293 aa27.3■■□□□ 1.96
CCDC47-204ENST00000582252 TICAM2Q86XR7 235 aa27.3■■□□□ 1.96
CCDC47-204ENST00000582252 NLRP10Q86W26 655 aa27.29■■□□□ 1.96
CCDC47-204ENST00000582252 NARFQ9UHQ1 456 aa27.29■■□□□ 1.96
CCDC47-204ENST00000582252 TNPO1Q92973 898 aaKnown RBP27.28■■□□□ 1.96
CCDC47-204ENST00000582252 DBNDD2Q9BQY9 259 aa27.28■■□□□ 1.96
CCDC47-204ENST00000582252 ZNF609O15014 1411 aa27.28■■□□□ 1.96
CCDC47-204ENST00000582252 CCDC171Q6TFL3 1326 aa27.28■■□□□ 1.96
CCDC47-204ENST00000582252 CSF1RP07333 972 aa27.27■■□□□ 1.96
CCDC47-204ENST00000582252 GPTP24298 496 aa27.27■■□□□ 1.96
CCDC47-204ENST00000582252 NMIQ13287 307 aaPredicted RBP27.27■■□□□ 1.96
CCDC47-204ENST00000582252 TAF7LQ5H9L4 462 aa27.27■■□□□ 1.96
CCDC47-204ENST00000582252 ZNF34Q8IZ26 560 aa27.27■■□□□ 1.96
CCDC47-204ENST00000582252 HAUS7Q99871 368 aa27.27■■□□□ 1.96
CCDC47-204ENST00000582252 SNX14Q9Y5W7 946 aa27.27■■□□□ 1.96
CCDC47-204ENST00000582252 TRAPPC3LQ5T215 181 aa27.27■■□□□ 1.96
CCDC47-204ENST00000582252 FAM89AQ96GI7 184 aa27.27■■□□□ 1.96
CCDC47-204ENST00000582252 AKAP2Q9Y2D5 859 aa27.27■■□□□ 1.96
CCDC47-204ENST00000582252 SPEF2Q9C093 1822 aa27.26■■□□□ 1.95
CCDC47-204ENST00000582252 ZPR1O75312 459 aa27.26■■□□□ 1.95
CCDC47-204ENST00000582252 IFIT5Q13325 482 aaKnown RBP27.26■■□□□ 1.95
CCDC47-204ENST00000582252 CEP126Q9P2H0 1117 aa27.26■■□□□ 1.95
CCDC47-204ENST00000582252 SSFA2P28290 1259 aa27.25■■□□□ 1.95
CCDC47-204ENST00000582252 SF3B2Q13435 895 aaKnown RBP27.25■■□□□ 1.95
CCDC47-204ENST00000582252 ARHGEF1Q92888 912 aaKnown RBP27.25■■□□□ 1.95
CCDC47-204ENST00000582252 TMX3Q96JJ7 454 aa27.25■■□□□ 1.95
CCDC47-204ENST00000582252 NEUROD6Q96NK8 337 aa27.25■■□□□ 1.95
CCDC47-204ENST00000582252 PARP10Q53GL7 1025 aa27.24■■□□□ 1.95
CCDC47-204ENST00000582252 AMIGO3Q86WK7 504 aa27.24■■□□□ 1.95
CCDC47-204ENST00000582252 ZKSCAN1P17029 563 aaPredicted RBP27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms