RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 COL4A1P02462 1669 aa26.23■■□□□ 1.79
PPP4R1-221ENST00000582240 SOGA3Q5TF21 947 aa26.23■■□□□ 1.79
PPP4R1-221ENST00000582240 ZNF784Q8NCA9 323 aaPredicted RBP26.23■■□□□ 1.79
PPP4R1-221ENST00000582240 ZNF526Q8TF50 670 aaPredicted RBP26.23■■□□□ 1.79
PPP4R1-221ENST00000582240 TAOK3Q9H2K8 898 aa26.23■■□□□ 1.79
PPP4R1-221ENST00000582240 ALDH1L1O75891 902 aa26.22■■□□□ 1.79
PPP4R1-221ENST00000582240 TNNQ9UQP3 1299 aa26.22■■□□□ 1.79
PPP4R1-221ENST00000582240 BBOX1O75936 387 aa26.21■■□□□ 1.79
PPP4R1-221ENST00000582240 HSP90B1P14625 803 aaKnown RBP26.21■■□□□ 1.79
PPP4R1-221ENST00000582240 LMNB1P20700 586 aa26.21■■□□□ 1.79
PPP4R1-221ENST00000582240 CTSWP56202 376 aa26.21■■□□□ 1.79
PPP4R1-221ENST00000582240 CCDC152Q4G0S7 254 aa26.21■■□□□ 1.79
PPP4R1-221ENST00000582240 TTLL11Q8NHH1 800 aa26.21■■□□□ 1.79
PPP4R1-221ENST00000582240 YTHDC1Q96MU7 727 aaKnown RBP26.21■■□□□ 1.79
PPP4R1-221ENST00000582240 ZNF277Q9NRM2 450 aaPredicted RBP26.21■■□□□ 1.79
PPP4R1-221ENST00000582240 C9orf78Q9NZ63 289 aaPredicted RBP26.21■■□□□ 1.79
PPP4R1-221ENST00000582240 ATP6V0A2Q9Y487 856 aa26.21■■□□□ 1.79
PPP4R1-221ENST00000582240 TAF1P21675 1872 aa26.21■■□□□ 1.79
PPP4R1-221ENST00000582240 BRPF1P55201 1214 aaPredicted RBP26.2■■□□□ 1.78
PPP4R1-221ENST00000582240 GRM8O00222 908 aa26.19■■□□□ 1.78
PPP4R1-221ENST00000582240 FKBP4Q02790 459 aaKnown RBP eCLIP26.19■■□□□ 1.78
PPP4R1-221ENST00000582240 RTKN2Q8IZC4 609 aa26.19■■□□□ 1.78
PPP4R1-221ENST00000582240 FRAT1Q92837 279 aaPredicted RBP26.19■■□□□ 1.78
PPP4R1-221ENST00000582240 GREM2Q9H772 168 aa26.19■■□□□ 1.78
PPP4R1-221ENST00000582240 RPS8P62241 208 aaKnown RBP26.18■■□□□ 1.78
PPP4R1-221ENST00000582240 EPHA10Q5JZY3 1008 aa26.18■■□□□ 1.78
PPP4R1-221ENST00000582240 SP8Q8IXZ3 490 aa26.18■■□□□ 1.78
PPP4R1-221ENST00000582240 CC2D2BQ6DHV5 1058 aa26.17■■□□□ 1.78
PPP4R1-221ENST00000582240 PLA2G12BQ9BX93 195 aa26.17■■□□□ 1.78
PPP4R1-221ENST00000582240 LTBP3Q9NS15 1303 aa26.16■■□□□ 1.78
PPP4R1-221ENST00000582240 SNED1Q8TER0 1413 aa26.16■■□□□ 1.78
PPP4R1-221ENST00000582240 NBPF7P0C2Y1 421 aaPredicted RBP26.16■■□□□ 1.78
PPP4R1-221ENST00000582240 FOXO4P98177 505 aa26.16■■□□□ 1.78
PPP4R1-221ENST00000582240 API5Q9BZZ5 524 aaKnown RBP26.16■■□□□ 1.78
PPP4R1-221ENST00000582240 FER1L6Q2WGJ9 1857 aa26.16■■□□□ 1.78
PPP4R1-221ENST00000582240 SUCLG2Q96I99 432 aa26.15■■□□□ 1.78
PPP4R1-221ENST00000582240 TMX4Q9H1E5 349 aaPredicted RBP26.15■■□□□ 1.78
PPP4R1-221ENST00000582240 FAM161AQ3B820 660 aa26.14■■□□□ 1.78
PPP4R1-221ENST00000582240 CHMP3Q9Y3E7 222 aa26.14■■□□□ 1.78
PPP4R1-221ENST00000582240 SBF1O95248 1867 aa26.14■■□□□ 1.78
PPP4R1-221ENST00000582240 CSF1RP07333 972 aa26.13■■□□□ 1.77
PPP4R1-221ENST00000582240 MPNDQ8N594 471 aa26.13■■□□□ 1.77
PPP4R1-221ENST00000582240 KIF16BQ96L93 1317 aa26.13■■□□□ 1.77
PPP4R1-221ENST00000582240 IARSP41252 1262 aaKnown RBP26.12■■□□□ 1.77
PPP4R1-221ENST00000582240 GPSM2P81274 684 aa26.12■■□□□ 1.77
PPP4R1-221ENST00000582240 LMBR1LQ6UX01 489 aa26.12■■□□□ 1.77
PPP4R1-221ENST00000582240 DPP8Q6V1X1 898 aaPredicted RBP26.12■■□□□ 1.77
PPP4R1-221ENST00000582240 ANKRD18AQ8IVF6 992 aa26.12■■□□□ 1.77
PPP4R1-221ENST00000582240 CLUAP1Q96AJ1 413 aa26.12■■□□□ 1.77
PPP4R1-221ENST00000582240 KAZALD1Q96I82 304 aa26.12■■□□□ 1.77
PPP4R1-221ENST00000582240 PSMD1Q99460 953 aa26.12■■□□□ 1.77
PPP4R1-221ENST00000582240 USP44Q9H0E7 712 aa26.12■■□□□ 1.77
PPP4R1-221ENST00000582240 ITGA6P23229 1130 aa26.11■■□□□ 1.77
PPP4R1-221ENST00000582240 NSFL1CQ9UNZ2 370 aaKnown RBP26.11■■□□□ 1.77
PPP4R1-221ENST00000582240 TRIM27P14373 513 aa26.1■■□□□ 1.77
PPP4R1-221ENST00000582240 CCT4P50991 539 aaKnown RBP26.1■■□□□ 1.77
PPP4R1-221ENST00000582240 ARHGAP45Q92619 1136 aa26.1■■□□□ 1.77
PPP4R1-221ENST00000582240 CCDC88AQ3V6T2 1871 aa26.1■■□□□ 1.77
PPP4R1-221ENST00000582240 UTYO14607 1347 aa26.1■■□□□ 1.77
PPP4R1-221ENST00000582240 IPO8O15397 1037 aaKnown RBP26.09■■□□□ 1.77
PPP4R1-221ENST00000582240 TMC4Q7Z404 712 aa26.09■■□□□ 1.77
PPP4R1-221ENST00000582240 GPR101Q96P66 508 aaPredicted RBP26.09■■□□□ 1.77
PPP4R1-221ENST00000582240 CDC5LQ99459 802 aaKnown RBP26.09■■□□□ 1.77
PPP4R1-221ENST00000582240 ATF7IPQ6VMQ6 1270 aa26.08■■□□□ 1.77
PPP4R1-221ENST00000582240 GPBP1L1Q9HC44 474 aaPredicted RBP26.08■■□□□ 1.77
PPP4R1-221ENST00000582240 AOC3Q16853 763 aa26.07■■□□□ 1.76
PPP4R1-221ENST00000582240 GRIPAP1Q4V328 841 aa26.07■■□□□ 1.76
PPP4R1-221ENST00000582240 ZKSCAN2Q63HK3 967 aa26.07■■□□□ 1.76
PPP4R1-221ENST00000582240 ZNF594Q96JF6 807 aaPredicted RBP26.07■■□□□ 1.76
PPP4R1-221ENST00000582240 BICC1Q9H694 974 aaKnown RBP26.07■■□□□ 1.76
PPP4R1-221ENST00000582240 RTL9Q8NET4 1388 aa26.07■■□□□ 1.76
PPP4R1-221ENST00000582240 ANKRD18BA2A2Z9 1011 aa26.06■■□□□ 1.76
PPP4R1-221ENST00000582240 PPIP5K2O43314 1243 aa26.06■■□□□ 1.76
PPP4R1-221ENST00000582240 LARGE2Q8N3Y3 721 aa26.06■■□□□ 1.76
PPP4R1-221ENST00000582240 RTFDC1Q9BY42 306 aaPredicted RBP26.06■■□□□ 1.76
PPP4R1-221ENST00000582240 POLLQ9UGP5 575 aa26.06■■□□□ 1.76
PPP4R1-221ENST00000582240 WTIPA6NIX2 430 aaPredicted RBP26.05■■□□□ 1.76
PPP4R1-221ENST00000582240 C6orf229H3BNL8 230 aa26.05■■□□□ 1.76
PPP4R1-221ENST00000582240 RIMBP2O15034 1052 aa26.05■■□□□ 1.76
PPP4R1-221ENST00000582240 ANKRD44Q8N8A2 993 aa26.05■■□□□ 1.76
PPP4R1-221ENST00000582240 NMRK2Q9NPI5 230 aa26.05■■□□□ 1.76
PPP4R1-221ENST00000582240 COL4A5P29400 1685 aa26.05■■□□□ 1.76
PPP4R1-221ENST00000582240 IGHMBP2P38935 993 aaKnown RBP26.04■■□□□ 1.76
PPP4R1-221ENST00000582240 IFIT5Q13325 482 aaKnown RBP26.04■■□□□ 1.76
PPP4R1-221ENST00000582240 INTS3Q68E01 1043 aaKnown RBP26.04■■□□□ 1.76
PPP4R1-221ENST00000582240 SUPT20HQ8NEM7 779 aa26.04■■□□□ 1.76
PPP4R1-221ENST00000582240 MEIS3Q99687 375 aa26.04■■□□□ 1.76
PPP4R1-221ENST00000582240 ANKIB1Q9P2G1 1089 aa26.04■■□□□ 1.76
PPP4R1-221ENST00000582240 MINPP1Q9UNW1 487 aa26.04■■□□□ 1.76
PPP4R1-221ENST00000582240 RRAGCQ9HB90 399 aa26.03■■□□□ 1.76
PPP4R1-221ENST00000582240 BSDC1Q9NW68 430 aaPredicted RBP26.03■■□□□ 1.76
PPP4R1-221ENST00000582240 ZNF541Q9H0D2 1346 aa26.03■■□□□ 1.76
PPP4R1-221ENST00000582240 MYH3P11055 1940 aa26.02■■□□□ 1.76
PPP4R1-221ENST00000582240 DDNO94850 711 aaPredicted RBP26.02■■□□□ 1.76
PPP4R1-221ENST00000582240 TMEM57Q8N5G2 664 aa26.02■■□□□ 1.76
PPP4R1-221ENST00000582240 TBC1D16Q8TBP0 767 aa26.02■■□□□ 1.76
PPP4R1-221ENST00000582240 JDP2Q8WYK2 163 aa26.02■■□□□ 1.76
PPP4R1-221ENST00000582240 GLTPD2A6NH11 291 aa26.01■■□□□ 1.75
PPP4R1-221ENST00000582240 CCDC57Q2TAC2 916 aa26.01■■□□□ 1.75
PPP4R1-221ENST00000582240 TIAM2Q8IVF5 1701 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms