RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 TTLL11Q8NHH1 800 aa25.21■■□□□ 1.63
TOP3A-213ENST00000582230 PANK1Q8TE04 598 aa25.21■■□□□ 1.63
TOP3A-213ENST00000582230 BCS1LQ9Y276 419 aa25.21■■□□□ 1.63
TOP3A-213ENST00000582230 CSF1RP07333 972 aa25.2■■□□□ 1.62
TOP3A-213ENST00000582230 FOXO4P98177 505 aa25.2■■□□□ 1.62
TOP3A-213ENST00000582230 GPR162Q16538 588 aa25.2■■□□□ 1.62
TOP3A-213ENST00000582230 ITPRIPQ8IWB1 547 aa25.2■■□□□ 1.62
TOP3A-213ENST00000582230 SUCLG2Q96I99 432 aa25.2■■□□□ 1.62
TOP3A-213ENST00000582230 LAMB2P55268 1798 aa25.2■■□□□ 1.62
TOP3A-213ENST00000582230 RRP1P56182 461 aaKnown RBP25.19■■□□□ 1.62
TOP3A-213ENST00000582230 PRPF40BQ6NWY9 871 aaKnown RBP25.19■■□□□ 1.62
TOP3A-213ENST00000582230 PELP1Q8IZL8 1130 aaKnown RBP25.19■■□□□ 1.62
TOP3A-213ENST00000582230 MEIS3Q99687 375 aa25.19■■□□□ 1.62
TOP3A-213ENST00000582230 WWC3Q9ULE0 1092 aa25.19■■□□□ 1.62
TOP3A-213ENST00000582230 COL11A2P13942 1736 aaPredicted RBP25.19■■□□□ 1.62
TOP3A-213ENST00000582230 RTL9Q8NET4 1388 aa25.18■■□□□ 1.62
TOP3A-213ENST00000582230 DLEC1Q9Y238 1755 aa25.18■■□□□ 1.62
TOP3A-213ENST00000582230 BBOX1O75936 387 aa25.18■■□□□ 1.62
TOP3A-213ENST00000582230 GRAPQ13588 217 aa25.17■■□□□ 1.62
TOP3A-213ENST00000582230 GRAPLQ8TC17 118 aaPredicted RBP25.17■■□□□ 1.62
TOP3A-213ENST00000582230 KAZALD1Q96I82 304 aa25.17■■□□□ 1.62
TOP3A-213ENST00000582230 YBX3P16989 372 aaKnown RBP eCLIP25.16■■□□□ 1.62
TOP3A-213ENST00000582230 MVPQ14764 893 aaKnown RBP25.16■■□□□ 1.62
TOP3A-213ENST00000582230 EPHA10Q5JZY3 1008 aa25.16■■□□□ 1.62
TOP3A-213ENST00000582230 LMBR1LQ6UX01 489 aa25.16■■□□□ 1.62
TOP3A-213ENST00000582230 CCDC85AQ96PX6 553 aaPredicted RBP25.16■■□□□ 1.62
TOP3A-213ENST00000582230 GREM2Q9H772 168 aa25.16■■□□□ 1.62
TOP3A-213ENST00000582230 GRIN3BO60391 1043 aa25.15■■□□□ 1.62
TOP3A-213ENST00000582230 RABL6Q3YEC7 729 aaPredicted RBP25.15■■□□□ 1.62
TOP3A-213ENST00000582230 TMC4Q7Z404 712 aa25.15■■□□□ 1.62
TOP3A-213ENST00000582230 CDC5LQ99459 802 aaKnown RBP25.15■■□□□ 1.62
TOP3A-213ENST00000582230 CHMP4BQ9H444 224 aaKnown RBP25.15■■□□□ 1.62
TOP3A-213ENST00000582230 BICC1Q9H694 974 aaKnown RBP25.15■■□□□ 1.62
TOP3A-213ENST00000582230 ZBTB7BO15156 539 aaPredicted RBP25.14■■□□□ 1.62
TOP3A-213ENST00000582230 SOGA3Q5TF21 947 aa25.14■■□□□ 1.62
TOP3A-213ENST00000582230 SEC31BQ9NQW1 1179 aa25.14■■□□□ 1.62
TOP3A-213ENST00000582230 DDX19BQ9UMR2 479 aa25.14■■□□□ 1.62
TOP3A-213ENST00000582230 BRCA1P38398 1863 aaKnown RBP25.13■■□□□ 1.61
TOP3A-213ENST00000582230 PPEF1O14829 653 aaPredicted RBP25.13■■□□□ 1.61
TOP3A-213ENST00000582230 RPS8P62241 208 aaKnown RBP25.13■■□□□ 1.61
TOP3A-213ENST00000582230 IFIT5Q13325 482 aaKnown RBP25.13■■□□□ 1.61
TOP3A-213ENST00000582230 C20orf194Q5TEA3 1177 aa25.13■■□□□ 1.61
TOP3A-213ENST00000582230 C7orf43Q8WVR3 580 aa25.13■■□□□ 1.61
TOP3A-213ENST00000582230 COG6Q9Y2V7 657 aa25.13■■□□□ 1.61
TOP3A-213ENST00000582230 CHMP3Q9Y3E7 222 aa25.13■■□□□ 1.61
TOP3A-213ENST00000582230 LRRFIP2Q9Y608 721 aaKnown RBP25.13■■□□□ 1.61
TOP3A-213ENST00000582230 ANKRD18BA2A2Z9 1011 aa25.12■■□□□ 1.61
TOP3A-213ENST00000582230 C21orf2O43822 256 aa25.12■■□□□ 1.61
TOP3A-213ENST00000582230 GNAI2P04899 355 aa25.12■■□□□ 1.61
TOP3A-213ENST00000582230 ITGA6P23229 1130 aa25.12■■□□□ 1.61
TOP3A-213ENST00000582230 FAM161AQ3B820 660 aa25.12■■□□□ 1.61
TOP3A-213ENST00000582230 CC2D2BQ6DHV5 1058 aa25.12■■□□□ 1.61
TOP3A-213ENST00000582230 ANKRD18AQ8IVF6 992 aa25.12■■□□□ 1.61
TOP3A-213ENST00000582230 ANKRD44Q8N8A2 993 aa25.12■■□□□ 1.61
TOP3A-213ENST00000582230 CELF1Q92879 486 aaKnown RBP25.12■■□□□ 1.61
TOP3A-213ENST00000582230 TMX4Q9H1E5 349 aaPredicted RBP25.12■■□□□ 1.61
TOP3A-213ENST00000582230 CCDC57Q2TAC2 916 aa25.11■■□□□ 1.61
TOP3A-213ENST00000582230 GRIPAP1Q4V328 841 aa25.11■■□□□ 1.61
TOP3A-213ENST00000582230 ATP6V0A2Q9Y487 856 aa25.11■■□□□ 1.61
TOP3A-213ENST00000582230 SP8Q8IXZ3 490 aa25.1■■□□□ 1.61
TOP3A-213ENST00000582230 ZNF219Q9P2Y4 722 aaPredicted RBP25.1■■□□□ 1.61
TOP3A-213ENST00000582230 SUPT16HQ9Y5B9 1047 aaKnown RBP25.09■■□□□ 1.61
TOP3A-213ENST00000582230 IGHMBP2P38935 993 aaKnown RBP25.08■■□□□ 1.61
TOP3A-213ENST00000582230 CCDC93Q567U6 631 aa25.08■■□□□ 1.61
TOP3A-213ENST00000582230 RTKN2Q8IZC4 609 aa25.08■■□□□ 1.61
TOP3A-213ENST00000582230 ARHGAP27Q6ZUM4 889 aa25.07■■□□□ 1.6
TOP3A-213ENST00000582230 BSDC1Q9NW68 430 aaPredicted RBP25.07■■□□□ 1.6
TOP3A-213ENST00000582230 MYH3P11055 1940 aa25.07■■□□□ 1.6
TOP3A-213ENST00000582230 SLX4Q8IY92 1834 aa25.07■■□□□ 1.6
TOP3A-213ENST00000582230 MPHOSPH8Q99549 860 aa25.06■■□□□ 1.6
TOP3A-213ENST00000582230 MTX1Q13505 466 aa25.05■■□□□ 1.6
TOP3A-213ENST00000582230 TAF7LQ5H9L4 462 aa25.05■■□□□ 1.6
TOP3A-213ENST00000582230 ZBTB40Q9NUA8 1239 aa25.05■■□□□ 1.6
TOP3A-213ENST00000582230 ARFGEF1Q9Y6D6 1849 aa25.05■■□□□ 1.6
TOP3A-213ENST00000582230 OLFM4Q6UX06 510 aa25.03■■□□□ 1.6
TOP3A-213ENST00000582230 CENPBP07199 599 aaPredicted RBP25.01■■□□□ 1.59
TOP3A-213ENST00000582230 LDHAL6AQ6ZMR3 332 aa25.01■■□□□ 1.59
TOP3A-213ENST00000582230 ZNF594Q96JF6 807 aaPredicted RBP25.01■■□□□ 1.59
TOP3A-213ENST00000582230 LTBP3Q9NS15 1303 aa25.01■■□□□ 1.59
TOP3A-213ENST00000582230 COL4A1P02462 1669 aa25.01■■□□□ 1.59
TOP3A-213ENST00000582230 NFKBIEO00221 500 aa25■■□□□ 1.59
TOP3A-213ENST00000582230 SRGAP3O43295 1099 aa25■■□□□ 1.59
TOP3A-213ENST00000582230 RFX5P48382 616 aaPredicted RBP25■■□□□ 1.59
TOP3A-213ENST00000582230 MPNDQ8N594 471 aa25■■□□□ 1.59
TOP3A-213ENST00000582230 PSMD1Q99460 953 aa25■■□□□ 1.59
TOP3A-213ENST00000582230 TAOK3Q9H2K8 898 aa25■■□□□ 1.59
TOP3A-213ENST00000582230 C1orf115Q9H7X2 142 aa25■■□□□ 1.59
TOP3A-213ENST00000582230 MINPP1Q9UNW1 487 aa25■■□□□ 1.59
TOP3A-213ENST00000582230 ATP8B2P98198 1209 aa24.99■■□□□ 1.59
TOP3A-213ENST00000582230 FKBP4Q02790 459 aaKnown RBP eCLIP24.99■■□□□ 1.59
TOP3A-213ENST00000582230 DPP8Q6V1X1 898 aaPredicted RBP24.99■■□□□ 1.59
TOP3A-213ENST00000582230 SNED1Q8TER0 1413 aa24.99■■□□□ 1.59
TOP3A-213ENST00000582230 CNNM1Q9NRU3 951 aa24.99■■□□□ 1.59
TOP3A-213ENST00000582230 NSFL1CQ9UNZ2 370 aaKnown RBP24.99■■□□□ 1.59
TOP3A-213ENST00000582230 CACNA1SQ13698 1873 aa24.98■■□□□ 1.59
TOP3A-213ENST00000582230 PTPN12Q05209 780 aaKnown RBP24.98■■□□□ 1.59
TOP3A-213ENST00000582230 SUPT20HQ8NEM7 779 aa24.98■■□□□ 1.59
TOP3A-213ENST00000582230 RTFDC1Q9BY42 306 aaPredicted RBP24.98■■□□□ 1.59
TOP3A-213ENST00000582230 ANKRD2Q9GZV1 360 aa24.98■■□□□ 1.59
TOP3A-213ENST00000582230 PODXL2Q9NZ53 605 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms