RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 FLIIQ13045 1269 aa24.97■■□□□ 1.59
SREBF1-220ENST00000581707 WDR90Q96KV7 1748 aa24.96■■□□□ 1.59
SREBF1-220ENST00000581707 IGKV5-2P06315 115 aa24.96■■□□□ 1.59
SREBF1-220ENST00000581707 HSPA6P17066 643 aa24.96■■□□□ 1.59
SREBF1-220ENST00000581707 JARID2Q92833 1246 aaPredicted RBP24.96■■□□□ 1.59
SREBF1-220ENST00000581707 POTECB2RU33 542 aa24.95■■□□□ 1.58
SREBF1-220ENST00000581707 FKBP5Q13451 457 aaPredicted RBP24.95■■□□□ 1.58
SREBF1-220ENST00000581707 TMC4Q7Z404 712 aa24.95■■□□□ 1.58
SREBF1-220ENST00000581707 JDP2Q8WYK2 163 aa24.95■■□□□ 1.58
SREBF1-220ENST00000581707 FZD9O00144 591 aa24.93■■□□□ 1.58
SREBF1-220ENST00000581707 LARGE2Q8N3Y3 721 aa24.93■■□□□ 1.58
SREBF1-220ENST00000581707 MPNDQ8N594 471 aa24.93■■□□□ 1.58
SREBF1-220ENST00000581707 ZNF541Q9H0D2 1346 aa24.92■■□□□ 1.58
SREBF1-220ENST00000581707 PDE8AO60658 829 aa24.92■■□□□ 1.58
SREBF1-220ENST00000581707 FSTL1Q12841 308 aa24.92■■□□□ 1.58
SREBF1-220ENST00000581707 CWF19L2Q2TBE0 894 aaKnown RBP24.92■■□□□ 1.58
SREBF1-220ENST00000581707 DPP8Q6V1X1 898 aaPredicted RBP24.92■■□□□ 1.58
SREBF1-220ENST00000581707 CELF1Q92879 486 aaKnown RBP24.92■■□□□ 1.58
SREBF1-220ENST00000581707 NEURL1BA8MQ27 555 aa24.91■■□□□ 1.58
SREBF1-220ENST00000581707 SUPT20HQ8NEM7 779 aa24.91■■□□□ 1.58
SREBF1-220ENST00000581707 DNAAF4Q8WXU2 420 aa24.91■■□□□ 1.58
SREBF1-220ENST00000581707 RTFDC1Q9BY42 306 aaPredicted RBP24.91■■□□□ 1.58
SREBF1-220ENST00000581707 VPS33BQ9H267 617 aa24.91■■□□□ 1.58
SREBF1-220ENST00000581707 CDHR2Q9BYE9 1310 aa24.9■■□□□ 1.58
SREBF1-220ENST00000581707 CCDC152Q4G0S7 254 aa24.9■■□□□ 1.58
SREBF1-220ENST00000581707 CEP350Q5VT06 3117 aa24.9■■□□□ 1.58
SREBF1-220ENST00000581707 COL4A5P29400 1685 aa24.89■■□□□ 1.58
SREBF1-220ENST00000581707 E9PSI1 815 aa24.89■■□□□ 1.58
SREBF1-220ENST00000581707 PPIP5K2O43314 1243 aa24.89■■□□□ 1.58
SREBF1-220ENST00000581707 RPS8P62241 208 aaKnown RBP24.89■■□□□ 1.58
SREBF1-220ENST00000581707 SMC1BQ8NDV3 1235 aa24.89■■□□□ 1.58
SREBF1-220ENST00000581707 L3MBTL3Q96JM7 780 aaPredicted RBP24.89■■□□□ 1.58
SREBF1-220ENST00000581707 EIF6P56537 245 aaKnown RBP24.88■■□□□ 1.57
SREBF1-220ENST00000581707 AOC3Q16853 763 aa24.88■■□□□ 1.57
SREBF1-220ENST00000581707 NIM1KQ8IY84 436 aa24.88■■□□□ 1.57
SREBF1-220ENST00000581707 SEC31BQ9NQW1 1179 aa24.88■■□□□ 1.57
SREBF1-220ENST00000581707 LRRC37AA6NMS7 1700 aa24.87■■□□□ 1.57
SREBF1-220ENST00000581707 IQCA1LA6NCM1 817 aa24.87■■□□□ 1.57
SREBF1-220ENST00000581707 LINS1Q8NG48 757 aa24.87■■□□□ 1.57
SREBF1-220ENST00000581707 COL4A1P02462 1669 aa24.86■■□□□ 1.57
SREBF1-220ENST00000581707 H7C1W4 665 aa24.86■■□□□ 1.57
SREBF1-220ENST00000581707 SLFN5Q08AF3 891 aa24.86■■□□□ 1.57
SREBF1-220ENST00000581707 GCKRQ14397 625 aa24.86■■□□□ 1.57
SREBF1-220ENST00000581707 GPC2Q8N158 579 aa24.86■■□□□ 1.57
SREBF1-220ENST00000581707 CCDC85AQ96PX6 553 aaPredicted RBP24.86■■□□□ 1.57
SREBF1-220ENST00000581707 SCN4AP35499 1836 aa24.86■■□□□ 1.57
SREBF1-220ENST00000581707 CTSWP56202 376 aa24.85■■□□□ 1.57
SREBF1-220ENST00000581707 UBE3BQ7Z3V4 1068 aa24.85■■□□□ 1.57
SREBF1-220ENST00000581707 NSFL1CQ9UNZ2 370 aaKnown RBP24.85■■□□□ 1.57
SREBF1-220ENST00000581707 F6X3S4 739 aa24.84■■□□□ 1.57
SREBF1-220ENST00000581707 APLP1P51693 650 aa24.84■■□□□ 1.57
SREBF1-220ENST00000581707 KIAA2012Q0VF49 1180 aa24.84■■□□□ 1.57
SREBF1-220ENST00000581707 DIEXFQ68CQ4 756 aaKnown RBP24.84■■□□□ 1.57
SREBF1-220ENST00000581707 GJA3Q9Y6H8 435 aa24.84■■□□□ 1.57
SREBF1-220ENST00000581707 MYH3P11055 1940 aa24.83■■□□□ 1.57
SREBF1-220ENST00000581707 TAF1DQ9H5J8 278 aaPredicted RBP24.83■■□□□ 1.57
SREBF1-220ENST00000581707 GPSM2P81274 684 aa24.82■■□□□ 1.56
SREBF1-220ENST00000581707 TTLL11Q8NHH1 800 aa24.82■■□□□ 1.56
SREBF1-220ENST00000581707 CDCA7LQ96GN5 454 aa24.82■■□□□ 1.56
SREBF1-220ENST00000581707 HACL1Q9UJ83 578 aa24.82■■□□□ 1.56
SREBF1-220ENST00000581707 ZNRF3Q9ULT6 936 aa24.82■■□□□ 1.56
SREBF1-220ENST00000581707 DUOX1Q9NRD9 1551 aa24.81■■□□□ 1.56
SREBF1-220ENST00000581707 ANKRD18AQ8IVF6 992 aa24.81■■□□□ 1.56
SREBF1-220ENST00000581707 C6orf229H3BNL8 230 aa24.8■■□□□ 1.56
SREBF1-220ENST00000581707 WASHC4Q2M389 1173 aa24.8■■□□□ 1.56
SREBF1-220ENST00000581707 BEND3Q5T5X7 828 aa24.8■■□□□ 1.56
SREBF1-220ENST00000581707 POLLQ9UGP5 575 aa24.8■■□□□ 1.56
SREBF1-220ENST00000581707 POTEIP0CG38 1075 aa24.79■■□□□ 1.56
SREBF1-220ENST00000581707 POTEJP0CG39 1038 aa24.79■■□□□ 1.56
SREBF1-220ENST00000581707 EPHX2P34913 555 aa24.79■■□□□ 1.56
SREBF1-220ENST00000581707 CASP7P55210 303 aa24.79■■□□□ 1.56
SREBF1-220ENST00000581707 MIER1Q8N108 512 aa24.79■■□□□ 1.56
SREBF1-220ENST00000581707 CDC5LQ99459 802 aaKnown RBP24.79■■□□□ 1.56
SREBF1-220ENST00000581707 PLA2G12BQ9BX93 195 aa24.79■■□□□ 1.56
SREBF1-220ENST00000581707 GREM2Q9H772 168 aa24.79■■□□□ 1.56
SREBF1-220ENST00000581707 CXCL9Q07325 125 aa24.78■■□□□ 1.56
SREBF1-220ENST00000581707 CHADLQ6NUI6 762 aa24.78■■□□□ 1.56
SREBF1-220ENST00000581707 RTL9Q8NET4 1388 aa24.78■■□□□ 1.56
SREBF1-220ENST00000581707 EAPPQ56P03 285 aaPredicted RBP24.77■■□□□ 1.56
SREBF1-220ENST00000581707 LDHDQ86WU2 507 aa24.77■■□□□ 1.56
SREBF1-220ENST00000581707 TRMT2AQ8IZ69 625 aaKnown RBP24.77■■□□□ 1.56
SREBF1-220ENST00000581707 MRPL50Q8N5N7 158 aaKnown RBP24.77■■□□□ 1.56
SREBF1-220ENST00000581707 TBC1D16Q8TBP0 767 aa24.77■■□□□ 1.56
SREBF1-220ENST00000581707 EYA3Q99504 573 aa24.77■■□□□ 1.56
SREBF1-220ENST00000581707 PODXL2Q9NZ53 605 aa24.77■■□□□ 1.56
SREBF1-220ENST00000581707 ANKIB1Q9P2G1 1089 aa24.77■■□□□ 1.56
SREBF1-220ENST00000581707 LTBP1Q14766 1721 aa24.76■■□□□ 1.55
SREBF1-220ENST00000581707 RIMBP2O15034 1052 aa24.76■■□□□ 1.55
SREBF1-220ENST00000581707 LMOD1P29536 600 aaPredicted RBP24.76■■□□□ 1.55
SREBF1-220ENST00000581707 SLC4A10Q6U841 1118 aa24.76■■□□□ 1.55
SREBF1-220ENST00000581707 CIAPIN1Q6FI81 312 aa24.75■■□□□ 1.55
SREBF1-220ENST00000581707 PNMA8AQ86V59 439 aaPredicted RBP24.75■■□□□ 1.55
SREBF1-220ENST00000581707 SSH1Q8WYL5 1049 aa24.75■■□□□ 1.55
SREBF1-220ENST00000581707 RAD17O75943 681 aa24.74■■□□□ 1.55
SREBF1-220ENST00000581707 CSF1RP07333 972 aa24.74■■□□□ 1.55
SREBF1-220ENST00000581707 SCNN1DP51172 638 aa24.74■■□□□ 1.55
SREBF1-220ENST00000581707 TNIP1Q15025 636 aa24.74■■□□□ 1.55
SREBF1-220ENST00000581707 BSDC1Q9NW68 430 aaPredicted RBP24.74■■□□□ 1.55
SREBF1-220ENST00000581707 GGA1Q9UJY5 639 aa24.74■■□□□ 1.55
SREBF1-220ENST00000581707 YDJCA8MPS7 323 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 1269.9 ms