RNA–Protein interactions for RNA: ENST00000581671.1

CTC1-208, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-208ENST00000581671 TIMELESSQ9UNS1 1208 aa12.97□□□□□ -0.33
CTC1-208ENST00000581671 NIP7Q9Y221 180 aaKnown RBP eCLIP12.97□□□□□ -0.33
CTC1-208ENST00000581671 ZBTB12Q9Y330 459 aaPredicted RBP12.97□□□□□ -0.33
CTC1-208ENST00000581671 ERBB4Q15303 1308 aa12.96□□□□□ -0.33
CTC1-208ENST00000581671 A0A1W2PPC1 479 aa12.96□□□□□ -0.33
CTC1-208ENST00000581671 PPEF1O14829 653 aaPredicted RBP12.96□□□□□ -0.33
CTC1-208ENST00000581671 HOXA10P31260 410 aaPredicted RBP12.96□□□□□ -0.33
CTC1-208ENST00000581671 FKBP1BP68106 108 aa12.96□□□□□ -0.33
CTC1-208ENST00000581671 RBM26Q5T8P6 1007 aaKnown RBP12.96□□□□□ -0.33
CTC1-208ENST00000581671 ANKRD13DQ6ZTN6 518 aa12.96□□□□□ -0.33
CTC1-208ENST00000581671 MOB2Q70IA6 237 aa12.96□□□□□ -0.33
CTC1-208ENST00000581671 DEFB123Q8N688 67 aa12.96□□□□□ -0.33
CTC1-208ENST00000581671 ZNF496Q96IT1 587 aaPredicted RBP12.96□□□□□ -0.33
CTC1-208ENST00000581671 TEX13AQ9BXU3 409 aaPredicted RBP12.96□□□□□ -0.33
CTC1-208ENST00000581671 ZNF652Q9Y2D9 606 aa12.96□□□□□ -0.33
CTC1-208ENST00000581671 PRAMEF22A3QJZ6 481 aa12.95□□□□□ -0.34
CTC1-208ENST00000581671 GTF2E1P29083 439 aaPredicted RBP12.95□□□□□ -0.34
CTC1-208ENST00000581671 SREBF2Q12772 1141 aa12.95□□□□□ -0.34
CTC1-208ENST00000581671 MKRN3Q13064 507 aaKnown RBP12.95□□□□□ -0.34
CTC1-208ENST00000581671 TTC5Q8N0Z6 440 aa12.95□□□□□ -0.34
CTC1-208ENST00000581671 DPF2Q92785 391 aa12.95□□□□□ -0.34
CTC1-208ENST00000581671 RPGRQ92834 1020 aaKnown RBP12.95□□□□□ -0.34
CTC1-208ENST00000581671 ABCC12Q96J65 1359 aa12.94□□□□□ -0.34
CTC1-208ENST00000581671 HEG1Q9ULI3 1381 aa12.94□□□□□ -0.34
CTC1-208ENST00000581671 LAMB4A4D0S4 1761 aa12.94□□□□□ -0.34
CTC1-208ENST00000581671 KIF7Q2M1P5 1343 aa12.94□□□□□ -0.34
CTC1-208ENST00000581671 MUC3AQ02505 3323 aa12.94□□□□□ -0.34
CTC1-208ENST00000581671 WTIPA6NIX2 430 aaPredicted RBP12.94□□□□□ -0.34
CTC1-208ENST00000581671 YDJCA8MPS7 323 aa12.94□□□□□ -0.34
CTC1-208ENST00000581671 SLC4A8Q2Y0W8 1093 aa12.94□□□□□ -0.34
CTC1-208ENST00000581671 Q7L0L9 218 aa12.94□□□□□ -0.34
CTC1-208ENST00000581671 RTFDC1Q9BY42 306 aaPredicted RBP12.94□□□□□ -0.34
CTC1-208ENST00000581671 GGA3Q9NZ52 723 aa12.94□□□□□ -0.34
CTC1-208ENST00000581671 ASTN2O75129 1339 aaPredicted RBP12.93□□□□□ -0.34
CTC1-208ENST00000581671 CLSPNQ9HAW4 1339 aa12.93□□□□□ -0.34
CTC1-208ENST00000581671 UBE2Q2LH0YL09 131 aa12.93□□□□□ -0.34
CTC1-208ENST00000581671 PIP4K2AP48426 406 aaPredicted RBP12.93□□□□□ -0.34
CTC1-208ENST00000581671 KIAA2012Q0VF49 1180 aa12.93□□□□□ -0.34
CTC1-208ENST00000581671 GPR153Q6NV75 609 aa12.93□□□□□ -0.34
CTC1-208ENST00000581671 SUPT20HQ8NEM7 779 aa12.93□□□□□ -0.34
CTC1-208ENST00000581671 RAPGEFL1Q9UHV5 662 aa12.93□□□□□ -0.34
CTC1-208ENST00000581671 RIC1Q4ADV7 1423 aa12.93□□□□□ -0.34
CTC1-208ENST00000581671 ZNF609O15014 1411 aa12.92□□□□□ -0.34
CTC1-208ENST00000581671 PLA2G5P39877 138 aa12.92□□□□□ -0.34
CTC1-208ENST00000581671 SULT6B1Q6IMI4 303 aa12.92□□□□□ -0.34
CTC1-208ENST00000581671 NUTM1Q86Y26 1132 aa12.92□□□□□ -0.34
CTC1-208ENST00000581671 CD99L2Q8TCZ2 262 aa12.92□□□□□ -0.34
CTC1-208ENST00000581671 ERO1AQ96HE7 468 aa12.92□□□□□ -0.34
CTC1-208ENST00000581671 CRAMP1Q96RY5 1269 aa12.92□□□□□ -0.34
CTC1-208ENST00000581671 EFCC1Q9HA90 598 aa12.92□□□□□ -0.34
CTC1-208ENST00000581671 ALDH1A1P00352 501 aa12.91□□□□□ -0.34
CTC1-208ENST00000581671 RBM17Q96I25 401 aaKnown RBP12.91□□□□□ -0.34
CTC1-208ENST00000581671 TMX4Q9H1E5 349 aaPredicted RBP12.91□□□□□ -0.34
CTC1-208ENST00000581671 MTMR10Q9NXD2 777 aa12.91□□□□□ -0.34
CTC1-208ENST00000581671 ATP6V0A2Q9Y487 856 aa12.91□□□□□ -0.34
CTC1-208ENST00000581671 PSMD14O00487 310 aa12.9□□□□□ -0.34
CTC1-208ENST00000581671 MYCP01106 439 aaPredicted RBP12.9□□□□□ -0.34
CTC1-208ENST00000581671 CAP1Q01518 475 aa12.9□□□□□ -0.34
CTC1-208ENST00000581671 KIF4BQ2VIQ3 1234 aa12.9□□□□□ -0.34
CTC1-208ENST00000581671 CDCA8Q53HL2 280 aa12.9□□□□□ -0.34
CTC1-208ENST00000581671 NBPF11Q86T75 865 aa12.9□□□□□ -0.34
CTC1-208ENST00000581671 KDM3BQ7LBC6 1761 aa12.89□□□□□ -0.35
CTC1-208ENST00000581671 SLC9C1Q4G0N8 1177 aa12.89□□□□□ -0.35
CTC1-208ENST00000581671 ZNF790Q6PG37 636 aa12.89□□□□□ -0.35
CTC1-208ENST00000581671 ZBTB7BO15156 539 aaPredicted RBP12.88□□□□□ -0.35
CTC1-208ENST00000581671 RGL2O15211 777 aa12.88□□□□□ -0.35
CTC1-208ENST00000581671 DPP8Q6V1X1 898 aaPredicted RBP12.88□□□□□ -0.35
CTC1-208ENST00000581671 NR2E3Q9Y5X4 410 aa12.88□□□□□ -0.35
CTC1-208ENST00000581671 EYSQ5T1H1 3165 aa12.88□□□□□ -0.35
CTC1-208ENST00000581671 RPS12P25398 132 aaKnown RBP12.87□□□□□ -0.35
CTC1-208ENST00000581671 HOXD11P31277 338 aaPredicted RBP12.87□□□□□ -0.35
CTC1-208ENST00000581671 HLFQ16534 295 aa12.87□□□□□ -0.35
CTC1-208ENST00000581671 ANGEL2Q5VTE6 544 aaKnown RBP12.87□□□□□ -0.35
CTC1-208ENST00000581671 FAM122AQ96E09 287 aa12.87□□□□□ -0.35
CTC1-208ENST00000581671 NYXQ9GZU5 481 aa12.87□□□□□ -0.35
CTC1-208ENST00000581671 PRUNE2Q8WUY3 3088 aa12.86□□□□□ -0.35
CTC1-208ENST00000581671 TTLL12Q14166 644 aaPredicted RBP12.86□□□□□ -0.35
CTC1-208ENST00000581671 C3orf67Q6ZVT6 689 aa12.86□□□□□ -0.35
CTC1-208ENST00000581671 IFNL1Q8IU54 200 aa12.86□□□□□ -0.35
CTC1-208ENST00000581671 SHISA4Q96DD7 197 aa12.86□□□□□ -0.35
CTC1-208ENST00000581671 FMNL2Q96PY5 1086 aa12.86□□□□□ -0.35
CTC1-208ENST00000581671 HTATIP2Q9BUP3 242 aa12.86□□□□□ -0.35
CTC1-208ENST00000581671 STAP2Q9UGK3 403 aa12.86□□□□□ -0.35
CTC1-208ENST00000581671 PTCH2Q9Y6C5 1203 aa12.86□□□□□ -0.35
CTC1-208ENST00000581671 USP16Q9Y5T5 823 aa12.85□□□□□ -0.35
CTC1-208ENST00000581671 SP3Q02447 781 aa12.84□□□□□ -0.35
CTC1-208ENST00000581671 TCIRG1Q13488 830 aa12.84□□□□□ -0.35
CTC1-208ENST00000581671 SCARF1Q14162 830 aa12.84□□□□□ -0.35
CTC1-208ENST00000581671 PRAMEF18Q5VWM3 479 aa12.84□□□□□ -0.35
CTC1-208ENST00000581671 SPRYD7Q5W111 196 aa12.84□□□□□ -0.35
CTC1-208ENST00000581671 PCGF6Q9BYE7 350 aa12.84□□□□□ -0.35
CTC1-208ENST00000581671 SCAF8Q9UPN6 1271 aaKnown RBP12.84□□□□□ -0.35
CTC1-208ENST00000581671 IGF2BP3O00425 579 aaKnown RBP eCLIP12.83□□□□□ -0.36
CTC1-208ENST00000581671 PTPN12Q05209 780 aaKnown RBP12.83□□□□□ -0.36
CTC1-208ENST00000581671 UBE2Q1Q7Z7E8 422 aa12.83□□□□□ -0.36
CTC1-208ENST00000581671 SP8Q8IXZ3 490 aa12.83□□□□□ -0.36
CTC1-208ENST00000581671 DBNDD1Q9H9R9 158 aa12.83□□□□□ -0.36
CTC1-208ENST00000581671 KCNQ5Q9NR82 932 aa12.83□□□□□ -0.36
CTC1-208ENST00000581671 RTL9Q8NET4 1388 aa12.82□□□□□ -0.36
CTC1-208ENST00000581671 MANSC4A6NHS7 340 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms