RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 FAM89AQ96GI7 184 aa27.02■■□□□ 1.92
CCDC42-203ENST00000581598 PPIP5K2O43314 1243 aa27.01■■□□□ 1.91
CCDC42-203ENST00000581598 WWC1Q8IX03 1113 aa27.01■■□□□ 1.91
CCDC42-203ENST00000581598 NIM1KQ8IY84 436 aa27.01■■□□□ 1.91
CCDC42-203ENST00000581598 PASKQ96RG2 1323 aa27■■□□□ 1.91
CCDC42-203ENST00000581598 DPP8Q6V1X1 898 aaPredicted RBP27■■□□□ 1.91
CCDC42-203ENST00000581598 MPNDQ8N594 471 aa27■■□□□ 1.91
CCDC42-203ENST00000581598 IL16Q14005 1332 aa26.99■■□□□ 1.91
CCDC42-203ENST00000581598 ANP32CO43423 234 aa26.99■■□□□ 1.91
CCDC42-203ENST00000581598 AOC3Q16853 763 aa26.99■■□□□ 1.91
CCDC42-203ENST00000581598 CREBZFQ9NS37 354 aa26.99■■□□□ 1.91
CCDC42-203ENST00000581598 LTBP1Q14766 1721 aa26.99■■□□□ 1.91
CCDC42-203ENST00000581598 EAPPQ56P03 285 aaPredicted RBP26.98■■□□□ 1.91
CCDC42-203ENST00000581598 COL13A1Q5TAT6 717 aaPredicted RBP26.98■■□□□ 1.91
CCDC42-203ENST00000581598 TSPYL6Q8N831 410 aa26.98■■□□□ 1.91
CCDC42-203ENST00000581598 ZBTB38Q8NAP3 1195 aaPredicted RBP26.98■■□□□ 1.91
CCDC42-203ENST00000581598 MRS2Q9HD23 443 aa26.98■■□□□ 1.91
CCDC42-203ENST00000581598 IRS4O14654 1257 aaPredicted RBP26.97■■□□□ 1.91
CCDC42-203ENST00000581598 DDX58O95786 925 aaKnown RBP26.97■■□□□ 1.91
CCDC42-203ENST00000581598 HSP90B1P14625 803 aaKnown RBP26.97■■□□□ 1.91
CCDC42-203ENST00000581598 KIAA2012Q0VF49 1180 aa26.97■■□□□ 1.91
CCDC42-203ENST00000581598 CCDC191Q8NCU4 936 aa26.97■■□□□ 1.91
CCDC42-203ENST00000581598 GJA3Q9Y6H8 435 aa26.97■■□□□ 1.91
CCDC42-203ENST00000581598 DUOX1Q9NRD9 1551 aa26.97■■□□□ 1.91
CCDC42-203ENST00000581598 ITGBL1O95965 494 aaPredicted RBP26.96■■□□□ 1.91
CCDC42-203ENST00000581598 LMOD1P29536 600 aaPredicted RBP26.96■■□□□ 1.91
CCDC42-203ENST00000581598 ZNRF3Q9ULT6 936 aa26.96■■□□□ 1.91
CCDC42-203ENST00000581598 SCNN1DP51172 638 aa26.95■■□□□ 1.9
CCDC42-203ENST00000581598 TSR2Q969E8 191 aaKnown RBP26.95■■□□□ 1.9
CCDC42-203ENST00000581598 ZNF428Q96B54 188 aa26.95■■□□□ 1.9
CCDC42-203ENST00000581598 MYD88Q99836 296 aa26.95■■□□□ 1.9
CCDC42-203ENST00000581598 METTL22Q9BUU2 404 aaPredicted RBP26.95■■□□□ 1.9
CCDC42-203ENST00000581598 PCCAP05165 728 aaPredicted RBP26.93■■□□□ 1.9
CCDC42-203ENST00000581598 CELF1Q92879 486 aaKnown RBP26.93■■□□□ 1.9
CCDC42-203ENST00000581598 CLEC11AQ9Y240 323 aa26.93■■□□□ 1.9
CCDC42-203ENST00000581598 RTL5Q5HYW3 569 aaPredicted RBP26.92■■□□□ 1.9
CCDC42-203ENST00000581598 CWC25Q9NXE8 425 aaPredicted RBP26.92■■□□□ 1.9
CCDC42-203ENST00000581598 CACNA1FO60840 1977 aa26.91■■□□□ 1.9
CCDC42-203ENST00000581598 CXCL9Q07325 125 aa26.91■■□□□ 1.9
CCDC42-203ENST00000581598 TWISTNBQ3B726 338 aaPredicted RBP26.91■■□□□ 1.9
CCDC42-203ENST00000581598 STK31Q9BXU1 1019 aa26.91■■□□□ 1.9
CCDC42-203ENST00000581598 COL4A1P02462 1669 aa26.91■■□□□ 1.9
CCDC42-203ENST00000581598 EPS15P42566 896 aa26.9■■□□□ 1.9
CCDC42-203ENST00000581598 KSR2Q6VAB6 950 aa26.9■■□□□ 1.9
CCDC42-203ENST00000581598 USP50Q70EL3 339 aaPredicted RBP26.9■■□□□ 1.9
CCDC42-203ENST00000581598 CNTROBQ8N137 903 aa26.9■■□□□ 1.9
CCDC42-203ENST00000581598 CDHR2Q9BYE9 1310 aa26.9■■□□□ 1.9
CCDC42-203ENST00000581598 RPS8P62241 208 aaKnown RBP26.89■■□□□ 1.9
CCDC42-203ENST00000581598 GPRC5DQ9NZD1 345 aa26.89■■□□□ 1.9
CCDC42-203ENST00000581598 MAP3K2Q9Y2U5 619 aa26.89■■□□□ 1.9
CCDC42-203ENST00000581598 TMEM88BA6NKF7 163 aa26.88■■□□□ 1.89
CCDC42-203ENST00000581598 PDE8AO60658 829 aa26.88■■□□□ 1.89
CCDC42-203ENST00000581598 CIAPIN1Q6FI81 312 aa26.88■■□□□ 1.89
CCDC42-203ENST00000581598 WDR63Q8IWG1 891 aa26.88■■□□□ 1.89
CCDC42-203ENST00000581598 PI4KAP2A4QPH2 592 aa26.87■■□□□ 1.89
CCDC42-203ENST00000581598 TNIP1Q15025 636 aa26.87■■□□□ 1.89
CCDC42-203ENST00000581598 MAP1SQ66K74 1059 aaPredicted RBP26.87■■□□□ 1.89
CCDC42-203ENST00000581598 PI4KAP1Q8N8J0 262 aa26.87■■□□□ 1.89
CCDC42-203ENST00000581598 NSFL1CQ9UNZ2 370 aaKnown RBP26.87■■□□□ 1.89
CCDC42-203ENST00000581598 CNTNAP1P78357 1384 aa26.86■■□□□ 1.89
CCDC42-203ENST00000581598 CCDC152Q4G0S7 254 aa26.86■■□□□ 1.89
CCDC42-203ENST00000581598 ADARB2Q9NS39 739 aaKnown RBP26.86■■□□□ 1.89
CCDC42-203ENST00000581598 IGKV5-2P06315 115 aa26.85■■□□□ 1.89
CCDC42-203ENST00000581598 GPSM2P81274 684 aa26.85■■□□□ 1.89
CCDC42-203ENST00000581598 WASHC4Q2M389 1173 aa26.85■■□□□ 1.89
CCDC42-203ENST00000581598 FANCIQ9NVI1 1328 aa26.85■■□□□ 1.89
CCDC42-203ENST00000581598 YDJCA8MPS7 323 aa26.84■■□□□ 1.89
CCDC42-203ENST00000581598 NEXNQ0ZGT2 675 aa26.84■■□□□ 1.89
CCDC42-203ENST00000581598 PODXL2Q9NZ53 605 aa26.84■■□□□ 1.89
CCDC42-203ENST00000581598 POLLQ9UGP5 575 aa26.84■■□□□ 1.89
CCDC42-203ENST00000581598 MKRN1Q9UHC7 482 aaKnown RBP26.84■■□□□ 1.89
CCDC42-203ENST00000581598 MYH3P11055 1940 aa26.84■■□□□ 1.89
CCDC42-203ENST00000581598 SLC4A2P04920 1241 aa26.83■■□□□ 1.89
CCDC42-203ENST00000581598 GMPSP49915 693 aaPredicted RBP26.83■■□□□ 1.89
CCDC42-203ENST00000581598 MIER1Q8N108 512 aa26.83■■□□□ 1.89
CCDC42-203ENST00000581598 EYA3Q99504 573 aa26.83■■□□□ 1.89
CCDC42-203ENST00000581598 SEC31BQ9NQW1 1179 aa26.83■■□□□ 1.89
CCDC42-203ENST00000581598 TRPM7Q96QT4 1865 aa26.81■■□□□ 1.88
CCDC42-203ENST00000581598 C6orf229H3BNL8 230 aa26.81■■□□□ 1.88
CCDC42-203ENST00000581598 RAD17O75943 681 aa26.81■■□□□ 1.88
CCDC42-203ENST00000581598 G2E3Q7L622 706 aa26.81■■□□□ 1.88
CCDC42-203ENST00000581598 TBC1D16Q8TBP0 767 aa26.81■■□□□ 1.88
CCDC42-203ENST00000581598 HSPA1AP0DMV8 641 aaKnown RBP26.8■■□□□ 1.88
CCDC42-203ENST00000581598 HSPA1BP0DMV9 641 aaKnown RBP26.8■■□□□ 1.88
CCDC42-203ENST00000581598 BCL2L13Q9BXK5 485 aa26.8■■□□□ 1.88
CCDC42-203ENST00000581598 NEURL1BA8MQ27 555 aa26.79■■□□□ 1.88
CCDC42-203ENST00000581598 VAMP4O75379 141 aa26.79■■□□□ 1.88
CCDC42-203ENST00000581598 FLIIQ13045 1269 aa26.79■■□□□ 1.88
CCDC42-203ENST00000581598 JARID2Q92833 1246 aaPredicted RBP26.79■■□□□ 1.88
CCDC42-203ENST00000581598 PGAP2Q9UHJ9 254 aa26.79■■□□□ 1.88
CCDC42-203ENST00000581598 RASSF10A6NK89 507 aa26.78■■□□□ 1.88
CCDC42-203ENST00000581598 CTSWP56202 376 aa26.78■■□□□ 1.88
CCDC42-203ENST00000581598 DPF2Q92785 391 aa26.78■■□□□ 1.88
CCDC42-203ENST00000581598 DBNDD1Q9H9R9 158 aa26.78■■□□□ 1.88
CCDC42-203ENST00000581598 RTL9Q8NET4 1388 aa26.78■■□□□ 1.88
CCDC42-203ENST00000581598 RIMBP2O15034 1052 aa26.77■■□□□ 1.88
CCDC42-203ENST00000581598 ANKRD18AQ8IVF6 992 aa26.77■■□□□ 1.88
CCDC42-203ENST00000581598 ZC3H15Q8WU90 426 aaKnown RBP26.77■■□□□ 1.88
CCDC42-203ENST00000581598 H7C1W4 665 aa26.76■■□□□ 1.87
CCDC42-203ENST00000581598 CWF19L2Q2TBE0 894 aaKnown RBP26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms