RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 CSF1RP07333 972 aa19.01■□□□□ 0.63
MKS1-210ENST00000581180 NPR1P16066 1061 aa19.01■□□□□ 0.63
MKS1-210ENST00000581180 FOXO4P98177 505 aa19.01■□□□□ 0.63
MKS1-210ENST00000581180 MVPQ14764 893 aaKnown RBP19.01■□□□□ 0.63
MKS1-210ENST00000581180 STYK1Q6J9G0 422 aa19.01■□□□□ 0.63
MKS1-210ENST00000581180 TTLL11Q8NHH1 800 aa19.01■□□□□ 0.63
MKS1-210ENST00000581180 ZBTB7BO15156 539 aaPredicted RBP19■□□□□ 0.63
MKS1-210ENST00000581180 CTSWP56202 376 aa19■□□□□ 0.63
MKS1-210ENST00000581180 COG6Q9Y2V7 657 aa19■□□□□ 0.63
MKS1-210ENST00000581180 COL4A1P02462 1669 aa19■□□□□ 0.63
MKS1-210ENST00000581180 GNAI3P08754 354 aa18.99■□□□□ 0.63
MKS1-210ENST00000581180 UBTFL1P0CB47 393 aaPredicted RBP18.99■□□□□ 0.63
MKS1-210ENST00000581180 RTL9Q8NET4 1388 aa18.98■□□□□ 0.63
MKS1-210ENST00000581180 RABL6Q3YEC7 729 aaPredicted RBP18.98■□□□□ 0.63
MKS1-210ENST00000581180 ANKRD44Q8N8A2 993 aa18.98■□□□□ 0.63
MKS1-210ENST00000581180 RPGRQ92834 1020 aaKnown RBP18.98■□□□□ 0.63
MKS1-210ENST00000581180 ZNF622Q969S3 477 aaKnown RBP eCLIP18.98■□□□□ 0.638e-7■■■□□ 15.6
MKS1-210ENST00000581180 RBM17Q96I25 401 aaKnown RBP18.98■□□□□ 0.63
MKS1-210ENST00000581180 CRAMP1Q96RY5 1269 aa18.98■□□□□ 0.63
MKS1-210ENST00000581180 PIM2Q9P1W9 311 aa18.98■□□□□ 0.63
MKS1-210ENST00000581180 SPEF2Q9C093 1822 aa18.97■□□□□ 0.63
MKS1-210ENST00000581180 CCDC152Q4G0S7 254 aa18.97■□□□□ 0.63
MKS1-210ENST00000581180 CNKSR1Q969H4 720 aa18.97■□□□□ 0.63
MKS1-210ENST00000581180 BICC1Q9H694 974 aaKnown RBP18.97■□□□□ 0.63
MKS1-210ENST00000581180 DDX19BQ9UMR2 479 aa18.97■□□□□ 0.63
MKS1-210ENST00000581180 LMBR1LQ6UX01 489 aa18.96■□□□□ 0.63
MKS1-210ENST00000581180 DDX46Q7L014 1031 aaKnown RBP18.96■□□□□ 0.63
MKS1-210ENST00000581180 TTLL6Q8N841 843 aa18.96■□□□□ 0.63
MKS1-210ENST00000581180 CCDC85AQ96PX6 553 aaPredicted RBP18.96■□□□□ 0.63
MKS1-210ENST00000581180 GREM2Q9H772 168 aa18.96■□□□□ 0.63
MKS1-210ENST00000581180 HDAC5Q9UQL6 1122 aa18.96■□□□□ 0.63
MKS1-210ENST00000581180 LRRFIP2Q9Y608 721 aaKnown RBP18.96■□□□□ 0.63
MKS1-210ENST00000581180 ALDH1B1P30837 517 aa18.95■□□□□ 0.62
MKS1-210ENST00000581180 FAM161AQ3B820 660 aa18.95■□□□□ 0.62
MKS1-210ENST00000581180 SEC31BQ9NQW1 1179 aa18.95■□□□□ 0.62
MKS1-210ENST00000581180 GNAI2P04899 355 aa18.94■□□□□ 0.62
MKS1-210ENST00000581180 GRAPQ13588 217 aa18.94■□□□□ 0.62
MKS1-210ENST00000581180 GRAPLQ8TC17 118 aaPredicted RBP18.94■□□□□ 0.62
MKS1-210ENST00000581180 CELF1Q92879 486 aaKnown RBP18.94■□□□□ 0.62
MKS1-210ENST00000581180 ZBTB40Q9NUA8 1239 aa18.94■□□□□ 0.62
MKS1-210ENST00000581180 WWC3Q9ULE0 1092 aa18.94■□□□□ 0.62
MKS1-210ENST00000581180 LRRC37AA6NMS7 1700 aa18.94■□□□□ 0.62
MKS1-210ENST00000581180 FER1L6Q2WGJ9 1857 aa18.93■□□□□ 0.62
MKS1-210ENST00000581180 CENPBP07199 599 aaPredicted RBP18.93■□□□□ 0.62
MKS1-210ENST00000581180 DALRD3Q5D0E6 543 aaKnown RBP18.93■□□□□ 0.62
MKS1-210ENST00000581180 PRPF40BQ6NWY9 871 aaKnown RBP18.93■□□□□ 0.62
MKS1-210ENST00000581180 C7orf43Q8WVR3 580 aa18.93■□□□□ 0.62
MKS1-210ENST00000581180 BBOX1O75936 387 aa18.92■□□□□ 0.62
MKS1-210ENST00000581180 ITGA6P23229 1130 aa18.92■□□□□ 0.62
MKS1-210ENST00000581180 YBX3P16989 372 aaKnown RBP eCLIP18.91■□□□□ 0.62
MKS1-210ENST00000581180 RPS8P62241 208 aaKnown RBP18.91■□□□□ 0.62
MKS1-210ENST00000581180 MTX1Q13505 466 aa18.91■□□□□ 0.62
MKS1-210ENST00000581180 CRBNQ96SW2 442 aa18.91■□□□□ 0.62
MKS1-210ENST00000581180 CHMP4BQ9H444 224 aaKnown RBP18.91■□□□□ 0.62
MKS1-210ENST00000581180 C1orf115Q9H7X2 142 aa18.91■□□□□ 0.62
MKS1-210ENST00000581180 BCS1LQ9Y276 419 aa18.91■□□□□ 0.62
MKS1-210ENST00000581180 CHMP3Q9Y3E7 222 aa18.91■□□□□ 0.62
MKS1-210ENST00000581180 GOLGB1Q14789 3259 aaKnown RBP18.91■□□□□ 0.62
MKS1-210ENST00000581180 A0A1B0GUL6 1792 aa18.91■□□□□ 0.62
MKS1-210ENST00000581180 ANKRD18BA2A2Z9 1011 aa18.9■□□□□ 0.62
MKS1-210ENST00000581180 RFX5P48382 616 aaPredicted RBP18.9■□□□□ 0.62
MKS1-210ENST00000581180 IFIT5Q13325 482 aaKnown RBP18.9■□□□□ 0.62
MKS1-210ENST00000581180 CDC5LQ99459 802 aaKnown RBP18.9■□□□□ 0.62
MKS1-210ENST00000581180 CCDC88AQ3V6T2 1871 aa18.9■□□□□ 0.62
MKS1-210ENST00000581180 PPEF1O14829 653 aaPredicted RBP18.89■□□□□ 0.61
MKS1-210ENST00000581180 CCDC57Q2TAC2 916 aa18.89■□□□□ 0.61
MKS1-210ENST00000581180 SLC51AQ86UW1 340 aa18.89■□□□□ 0.61
MKS1-210ENST00000581180 ANKRD18AQ8IVF6 992 aa18.89■□□□□ 0.61
MKS1-210ENST00000581180 SNED1Q8TER0 1413 aa18.89■□□□□ 0.61
MKS1-210ENST00000581180 SBF1O95248 1867 aa18.88■□□□□ 0.61
MKS1-210ENST00000581180 C21orf2O43822 256 aa18.88■□□□□ 0.61
MKS1-210ENST00000581180 TMC4Q7Z404 712 aa18.88■□□□□ 0.61
MKS1-210ENST00000581180 ATP6V0A2Q9Y487 856 aa18.88■□□□□ 0.61
MKS1-210ENST00000581180 LTBP1Q14766 1721 aa18.88■□□□□ 0.61
MKS1-210ENST00000581180 ATP8B2P98198 1209 aa18.87■□□□□ 0.61
MKS1-210ENST00000581180 OLFM4Q6UX06 510 aa18.87■□□□□ 0.61
MKS1-210ENST00000581180 SP8Q8IXZ3 490 aa18.87■□□□□ 0.61
MKS1-210ENST00000581180 ZNF594Q96JF6 807 aaPredicted RBP18.87■□□□□ 0.61
MKS1-210ENST00000581180 PNMA6EA0A0J9YXQ4 647 aa18.86■□□□□ 0.61
MKS1-210ENST00000581180 IGHMBP2P38935 993 aaKnown RBP18.86■□□□□ 0.61
MKS1-210ENST00000581180 GPR162Q16538 588 aa18.86■□□□□ 0.61
MKS1-210ENST00000581180 CEP85Q6P2H3 762 aa18.86■□□□□ 0.61
MKS1-210ENST00000581180 PELP1Q8IZL8 1130 aaKnown RBP18.86■□□□□ 0.61
MKS1-210ENST00000581180 BSDC1Q9NW68 430 aaPredicted RBP18.86■□□□□ 0.61
MKS1-210ENST00000581180 ZNF219Q9P2Y4 722 aaPredicted RBP18.86■□□□□ 0.61
MKS1-210ENST00000581180 SRGAP3O43295 1099 aa18.85■□□□□ 0.61
MKS1-210ENST00000581180 PTPN12Q05209 780 aaKnown RBP18.85■□□□□ 0.61
MKS1-210ENST00000581180 POLA2Q14181 598 aa18.85■□□□□ 0.61
MKS1-210ENST00000581180 CC2D2BQ6DHV5 1058 aa18.85■□□□□ 0.61
MKS1-210ENST00000581180 SOGA3Q5TF21 947 aa18.84■□□□□ 0.61
MKS1-210ENST00000581180 KLHDC4Q8TBB5 520 aa18.84■□□□□ 0.61
MKS1-210ENST00000581180 SSH3Q8TE77 659 aa18.84■□□□□ 0.61
MKS1-210ENST00000581180 COPRSQ9NQ92 184 aa18.84■□□□□ 0.61
MKS1-210ENST00000581180 DICER1Q9UPY3 1922 aaKnown RBP18.84■□□□□ 0.61
MKS1-210ENST00000581180 CHD4Q14839 1912 aa18.83■□□□□ 0.6
MKS1-210ENST00000581180 CCDC93Q567U6 631 aa18.83■□□□□ 0.6
MKS1-210ENST00000581180 TAF7LQ5H9L4 462 aa18.83■□□□□ 0.6
MKS1-210ENST00000581180 SIRT2Q8IXJ6 389 aa18.83■□□□□ 0.6
MKS1-210ENST00000581180 RPAP2Q8IXW5 612 aaPredicted RBP18.83■□□□□ 0.6
MKS1-210ENST00000581180 EXOC6Q8TAG9 804 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms