RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 ATP5J2-PTCD1G3V325 749 aa16.14■□□□□ 0.17
SENP3-204ENST00000580997 SF3B3Q15393 1217 aaKnown RBP16.14■□□□□ 0.17
SENP3-204ENST00000580997 LARGE2Q8N3Y3 721 aa16.14■□□□□ 0.17
SENP3-204ENST00000580997 FAM89AQ96GI7 184 aa16.14■□□□□ 0.17
SENP3-204ENST00000580997 PHAXQ9H814 394 aaKnown RBP16.14■□□□□ 0.17
SENP3-204ENST00000580997 PLSCR2Q9NRY7 297 aa16.14■□□□□ 0.17
SENP3-204ENST00000580997 EIF6P56537 245 aaKnown RBP16.13■□□□□ 0.17
SENP3-204ENST00000580997 GRAPQ13588 217 aa16.13■□□□□ 0.17
SENP3-204ENST00000580997 TMC4Q7Z404 712 aa16.13■□□□□ 0.17
SENP3-204ENST00000580997 RIC3Q7Z5B4 369 aa16.13■□□□□ 0.17
SENP3-204ENST00000580997 PNMA8AQ86V59 439 aaPredicted RBP16.13■□□□□ 0.17
SENP3-204ENST00000580997 WWC1Q8IX03 1113 aa16.13■□□□□ 0.17
SENP3-204ENST00000580997 GRAPLQ8TC17 118 aaPredicted RBP16.13■□□□□ 0.17
SENP3-204ENST00000580997 ITGBL1O95965 494 aaPredicted RBP16.12■□□□□ 0.17
SENP3-204ENST00000580997 EPHX2P34913 555 aa16.12■□□□□ 0.17
SENP3-204ENST00000580997 GOLGA2Q08379 1002 aa16.12■□□□□ 0.17
SENP3-204ENST00000580997 CCDC30Q5VVM6 783 aa16.12■□□□□ 0.17
SENP3-204ENST00000580997 SUPT20HQ8NEM7 779 aa16.12■□□□□ 0.17
SENP3-204ENST00000580997 PASKQ96RG2 1323 aa16.12■□□□□ 0.17
SENP3-204ENST00000580997 LAMB2P55268 1798 aa16.11■□□□□ 0.17
SENP3-204ENST00000580997 DPP8Q6V1X1 898 aaPredicted RBP16.11■□□□□ 0.17
SENP3-204ENST00000580997 MPNDQ8N594 471 aa16.11■□□□□ 0.17
SENP3-204ENST00000580997 TSPYL6Q8N831 410 aa16.11■□□□□ 0.17
SENP3-204ENST00000580997 ZBTB38Q8NAP3 1195 aaPredicted RBP16.11■□□□□ 0.17
SENP3-204ENST00000580997 ZNF428Q96B54 188 aa16.11■□□□□ 0.17
SENP3-204ENST00000580997 CREBZFQ9NS37 354 aa16.11■□□□□ 0.17
SENP3-204ENST00000580997 PPIP5K2O43314 1243 aa16.1■□□□□ 0.17
SENP3-204ENST00000580997 ANP32CO43423 234 aa16.1■□□□□ 0.17
SENP3-204ENST00000580997 AOC3Q16853 763 aa16.1■□□□□ 0.17
SENP3-204ENST00000580997 NIM1KQ8IY84 436 aa16.1■□□□□ 0.17
SENP3-204ENST00000580997 CCDC191Q8NCU4 936 aa16.1■□□□□ 0.17
SENP3-204ENST00000580997 TSR2Q969E8 191 aaKnown RBP16.1■□□□□ 0.17
SENP3-204ENST00000580997 ZNRF3Q9ULT6 936 aa16.1■□□□□ 0.17
SENP3-204ENST00000580997 IL16Q14005 1332 aa16.1■□□□□ 0.17
SENP3-204ENST00000580997 ADAMTSL1Q8N6G6 1762 aa16.09■□□□□ 0.17
SENP3-204ENST00000580997 IRS4O14654 1257 aaPredicted RBP16.09■□□□□ 0.17
SENP3-204ENST00000580997 SCNN1DP51172 638 aa16.09■□□□□ 0.17
SENP3-204ENST00000580997 KIAA2012Q0VF49 1180 aa16.09■□□□□ 0.17
SENP3-204ENST00000580997 METTL22Q9BUU2 404 aaPredicted RBP16.09■□□□□ 0.17
SENP3-204ENST00000580997 MRS2Q9HD23 443 aa16.09■□□□□ 0.17
SENP3-204ENST00000580997 GJA3Q9Y6H8 435 aa16.09■□□□□ 0.17
SENP3-204ENST00000580997 DDX60Q8IY21 1712 aaKnown RBP16.08■□□□□ 0.17
SENP3-204ENST00000580997 DDX58O95786 925 aaKnown RBP16.08■□□□□ 0.16
SENP3-204ENST00000580997 HSP90B1P14625 803 aaKnown RBP16.08■□□□□ 0.16
SENP3-204ENST00000580997 EAPPQ56P03 285 aaPredicted RBP16.08■□□□□ 0.16
SENP3-204ENST00000580997 RTL5Q5HYW3 569 aaPredicted RBP16.08■□□□□ 0.16
SENP3-204ENST00000580997 CELF1Q92879 486 aaKnown RBP16.08■□□□□ 0.16
SENP3-204ENST00000580997 MYD88Q99836 296 aa16.08■□□□□ 0.16
SENP3-204ENST00000580997 PCCAP05165 728 aaPredicted RBP16.07■□□□□ 0.16
SENP3-204ENST00000580997 EPS15P42566 896 aa16.07■□□□□ 0.16
SENP3-204ENST00000580997 CXCL9Q07325 125 aa16.07■□□□□ 0.16
SENP3-204ENST00000580997 IFFO2Q5TF58 517 aa16.07■□□□□ 0.16
SENP3-204ENST00000580997 KSR2Q6VAB6 950 aa16.07■□□□□ 0.16
SENP3-204ENST00000580997 LMOD1P29536 600 aaPredicted RBP16.06■□□□□ 0.16
SENP3-204ENST00000580997 RPS8P62241 208 aaKnown RBP16.06■□□□□ 0.16
SENP3-204ENST00000580997 CNTROBQ8N137 903 aa16.06■□□□□ 0.16
SENP3-204ENST00000580997 CWC25Q9NXE8 425 aaPredicted RBP16.06■□□□□ 0.16
SENP3-204ENST00000580997 CLEC11AQ9Y240 323 aa16.06■□□□□ 0.16
SENP3-204ENST00000580997 LTBP1Q14766 1721 aa16.05■□□□□ 0.16
SENP3-204ENST00000580997 PI4KAP2A4QPH2 592 aa16.05■□□□□ 0.16
SENP3-204ENST00000580997 TWISTNBQ3B726 338 aaPredicted RBP16.05■□□□□ 0.16
SENP3-204ENST00000580997 MAP1SQ66K74 1059 aaPredicted RBP16.05■□□□□ 0.16
SENP3-204ENST00000580997 USP50Q70EL3 339 aaPredicted RBP16.05■□□□□ 0.16
SENP3-204ENST00000580997 WDR63Q8IWG1 891 aa16.05■□□□□ 0.16
SENP3-204ENST00000580997 PI4KAP1Q8N8J0 262 aa16.05■□□□□ 0.16
SENP3-204ENST00000580997 GPRC5DQ9NZD1 345 aa16.05■□□□□ 0.16
SENP3-204ENST00000580997 MAP3K2Q9Y2U5 619 aa16.05■□□□□ 0.16
SENP3-204ENST00000580997 LRRC37AA6NMS7 1700 aa16.05■□□□□ 0.16
SENP3-204ENST00000580997 DUOX1Q9NRD9 1551 aa16.04■□□□□ 0.16
SENP3-204ENST00000580997 TAF1P21675 1872 aa16.04■□□□□ 0.16
SENP3-204ENST00000580997 TMEM88BA6NKF7 163 aa16.04■□□□□ 0.16
SENP3-204ENST00000580997 PDE8AO60658 829 aa16.04■□□□□ 0.16
SENP3-204ENST00000580997 STK31Q9BXU1 1019 aa16.04■□□□□ 0.16
SENP3-204ENST00000580997 NSFL1CQ9UNZ2 370 aaKnown RBP16.04■□□□□ 0.16
SENP3-204ENST00000580997 CDHR2Q9BYE9 1310 aa16.03■□□□□ 0.16
SENP3-204ENST00000580997 COL4A1P02462 1669 aa16.03■□□□□ 0.16
SENP3-204ENST00000580997 YDJCA8MPS7 323 aa16.03■□□□□ 0.16
SENP3-204ENST00000580997 SLC4A2P04920 1241 aa16.03■□□□□ 0.16
SENP3-204ENST00000580997 IGKV5-2P06315 115 aa16.03■□□□□ 0.16
SENP3-204ENST00000580997 GPSM2P81274 684 aa16.03■□□□□ 0.16
SENP3-204ENST00000580997 TNIP1Q15025 636 aa16.03■□□□□ 0.16
SENP3-204ENST00000580997 WASHC4Q2M389 1173 aa16.03■□□□□ 0.16
SENP3-204ENST00000580997 CIAPIN1Q6FI81 312 aa16.03■□□□□ 0.16
SENP3-204ENST00000580997 SEC31BQ9NQW1 1179 aa16.03■□□□□ 0.16
SENP3-204ENST00000580997 ADARB2Q9NS39 739 aaKnown RBP16.03■□□□□ 0.16
SENP3-204ENST00000580997 PODXL2Q9NZ53 605 aa16.03■□□□□ 0.16
SENP3-204ENST00000580997 POLLQ9UGP5 575 aa16.03■□□□□ 0.16
SENP3-204ENST00000580997 FANCIQ9NVI1 1328 aa16.02■□□□□ 0.16
SENP3-204ENST00000580997 CCDC152Q4G0S7 254 aa16.02■□□□□ 0.16
SENP3-204ENST00000580997 G2E3Q7L622 706 aa16.02■□□□□ 0.16
SENP3-204ENST00000580997 CNTNAP1P78357 1384 aa16.01■□□□□ 0.15
SENP3-204ENST00000580997 VAMP4O75379 141 aa16.01■□□□□ 0.15
SENP3-204ENST00000580997 RAD17O75943 681 aa16.01■□□□□ 0.15
SENP3-204ENST00000580997 GMPSP49915 693 aaPredicted RBP16.01■□□□□ 0.15
SENP3-204ENST00000580997 TBC1D16Q8TBP0 767 aa16.01■□□□□ 0.15
SENP3-204ENST00000580997 MKRN1Q9UHC7 482 aaKnown RBP16.01■□□□□ 0.15
SENP3-204ENST00000580997 PGAP2Q9UHJ9 254 aa16.01■□□□□ 0.15
SENP3-204ENST00000580997 NEXNQ0ZGT2 675 aa16■□□□□ 0.15
SENP3-204ENST00000580997 JARID2Q92833 1246 aaPredicted RBP16■□□□□ 0.15
SENP3-204ENST00000580997 NEURL1BA8MQ27 555 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms