RNA–Protein interactions for RNA: ENST00000580569.1

RFFL-207, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene RFFL, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-207ENST00000580569 SEC24BO95487 1268 aa9.86□□□□□ -0.83
RFFL-207ENST00000580569 DPEP1P16444 411 aa9.86□□□□□ -0.83
RFFL-207ENST00000580569 FLIIQ13045 1269 aa9.86□□□□□ -0.83
RFFL-207ENST00000580569 MAP2K5Q13163 448 aa9.86□□□□□ -0.83
RFFL-207ENST00000580569 ITPK1Q13572 414 aa9.86□□□□□ -0.83
RFFL-207ENST00000580569 CCDC30Q5VVM6 783 aa9.86□□□□□ -0.83
RFFL-207ENST00000580569 ANKRD44Q8N8A2 993 aa9.86□□□□□ -0.83
RFFL-207ENST00000580569 SMC1BQ8NDV3 1235 aa9.86□□□□□ -0.83
RFFL-207ENST00000580569 DCAF5Q96JK2 942 aa9.86□□□□□ -0.83
RFFL-207ENST00000580569 ANP32EQ9BTT0 268 aa9.86□□□□□ -0.83
RFFL-207ENST00000580569 CCDC87Q9NVE4 849 aa9.86□□□□□ -0.83
RFFL-207ENST00000580569 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.86□□□□□ -0.83
RFFL-207ENST00000580569 AFDNP55196 1824 aaKnown RBP9.85□□□□□ -0.83
RFFL-207ENST00000580569 SLC34A2O95436 690 aa9.85□□□□□ -0.83
RFFL-207ENST00000580569 ATP6V1AP38606 617 aa9.85□□□□□ -0.83
RFFL-207ENST00000580569 AMHR2Q16671 573 aa9.85□□□□□ -0.83
RFFL-207ENST00000580569 TRAPPC3LQ5T215 181 aa9.85□□□□□ -0.83
RFFL-207ENST00000580569 CHD1LQ86WJ1 897 aa9.85□□□□□ -0.83
RFFL-207ENST00000580569 DCTPP1Q9H773 170 aa9.85□□□□□ -0.83
RFFL-207ENST00000580569 TRPC6Q9Y210 931 aa9.85□□□□□ -0.83
RFFL-207ENST00000580569 NOP58Q9Y2X3 529 aaKnown RBP9.85□□□□□ -0.83
RFFL-207ENST00000580569 TIAM2Q8IVF5 1701 aa9.85□□□□□ -0.83
RFFL-207ENST00000580569 AK9Q5TCS8 1911 aa9.84□□□□□ -0.83
RFFL-207ENST00000580569 F6X3S4 739 aa9.84□□□□□ -0.83
RFFL-207ENST00000580569 IRF6O14896 467 aa9.84□□□□□ -0.83
RFFL-207ENST00000580569 HSPA1AP0DMV8 641 aaKnown RBP9.84□□□□□ -0.83
RFFL-207ENST00000580569 HSPA1BP0DMV9 641 aaKnown RBP9.84□□□□□ -0.83
RFFL-207ENST00000580569 GYS1P13807 737 aa9.84□□□□□ -0.83
RFFL-207ENST00000580569 CCT4P50991 539 aaKnown RBP9.84□□□□□ -0.83
RFFL-207ENST00000580569 RC3H1Q5TC82 1133 aaKnown RBP9.84□□□□□ -0.83
RFFL-207ENST00000580569 CEP85Q6P2H3 762 aa9.84□□□□□ -0.83
RFFL-207ENST00000580569 RPAP2Q8IXW5 612 aaPredicted RBP9.84□□□□□ -0.83
RFFL-207ENST00000580569 MEIS3Q99687 375 aa9.84□□□□□ -0.83
RFFL-207ENST00000580569 RRAGCQ9HB90 399 aa9.84□□□□□ -0.83
RFFL-207ENST00000580569 PIM2Q9P1W9 311 aa9.84□□□□□ -0.83
RFFL-207ENST00000580569 ASAP1Q9ULH1 1129 aa9.84□□□□□ -0.83
RFFL-207ENST00000580569 RTCBQ9Y3I0 505 aaKnown RBP9.84□□□□□ -0.83
RFFL-207ENST00000580569 GRXCR2A6NFK2 248 aa9.83□□□□□ -0.84
RFFL-207ENST00000580569 BTBD11A6QL63 1104 aa9.83□□□□□ -0.84
RFFL-207ENST00000580569 STK31Q9BXU1 1019 aa9.83□□□□□ -0.84
RFFL-207ENST00000580569 ATG3Q9NT62 314 aa9.83□□□□□ -0.84
RFFL-207ENST00000580569 TMOD3Q9NYL9 352 aa9.83□□□□□ -0.84
RFFL-207ENST00000580569 SPG7Q9UQ90 795 aa9.83□□□□□ -0.84
RFFL-207ENST00000580569 CNTNAP4Q9C0A0 1308 aa9.82□□□□□ -0.84
RFFL-207ENST00000580569 NRXN2Q9P2S2 1712 aa9.82□□□□□ -0.84
RFFL-207ENST00000580569 PHKG2P15735 406 aa9.82□□□□□ -0.84
RFFL-207ENST00000580569 DALRD3Q5D0E6 543 aaKnown RBP9.82□□□□□ -0.84
RFFL-207ENST00000580569 C1orf141Q5JVX7 400 aa9.82□□□□□ -0.84
RFFL-207ENST00000580569 NPM2Q86SE8 214 aaKnown RBP9.82□□□□□ -0.84
RFFL-207ENST00000580569 LNPKQ9C0E8 428 aa9.82□□□□□ -0.84
RFFL-207ENST00000580569 RNF181Q9P0P0 153 aa9.82□□□□□ -0.84
RFFL-207ENST00000580569 PARP3Q9Y6F1 533 aa9.82□□□□□ -0.84
RFFL-207ENST00000580569 ARFGEF2Q9Y6D5 1785 aa9.82□□□□□ -0.84
RFFL-207ENST00000580569 RPS6KA4O75676 772 aa9.81□□□□□ -0.84
RFFL-207ENST00000580569 TEFQ10587 303 aa9.81□□□□□ -0.84
RFFL-207ENST00000580569 HDGFL1Q5TGJ6 251 aa9.81□□□□□ -0.84
RFFL-207ENST00000580569 IFNL2Q8IZJ0 200 aa9.81□□□□□ -0.84
RFFL-207ENST00000580569 PHAXQ9H814 394 aaKnown RBP9.81□□□□□ -0.84
RFFL-207ENST00000580569 FER1L6Q2WGJ9 1857 aa9.81□□□□□ -0.84
RFFL-207ENST00000580569 TJP1Q07157 1748 aa9.8□□□□□ -0.84
RFFL-207ENST00000580569 VEGFAP15692 232 aaPredicted RBP9.8□□□□□ -0.84
RFFL-207ENST00000580569 RFC4P35249 363 aa9.8□□□□□ -0.84
RFFL-207ENST00000580569 ANKRD45Q5TZF3 282 aa9.8□□□□□ -0.84
RFFL-207ENST00000580569 SLC4A9Q96Q91 983 aa9.8□□□□□ -0.84
RFFL-207ENST00000580569 IBTKQ9P2D0 1353 aaPredicted RBP9.79□□□□□ -0.84
RFFL-207ENST00000580569 GLTPD2A6NH11 291 aa9.79□□□□□ -0.84
RFFL-207ENST00000580569 FKBP5Q13451 457 aaPredicted RBP9.79□□□□□ -0.84
RFFL-207ENST00000580569 BMP2KLQ5H9B9 411 aa9.79□□□□□ -0.84
RFFL-207ENST00000580569 NECTIN2Q92692 538 aa9.79□□□□□ -0.84
RFFL-207ENST00000580569 TBC1D32Q96NH3 1257 aa9.79□□□□□ -0.84
RFFL-207ENST00000580569 CHMP4AQ9BY43 222 aa9.79□□□□□ -0.84
RFFL-207ENST00000580569 USP44Q9H0E7 712 aa9.79□□□□□ -0.84
RFFL-207ENST00000580569 SLC52A2Q9HAB3 445 aa9.79□□□□□ -0.84
RFFL-207ENST00000580569 CHPF2Q9P2E5 772 aa9.79□□□□□ -0.84
RFFL-207ENST00000580569 ERVV-2B6SEH9 535 aa9.78□□□□□ -0.84
RFFL-207ENST00000580569 GNAI2P04899 355 aa9.78□□□□□ -0.84
RFFL-207ENST00000580569 CD44P16070 742 aaKnown RBP9.78□□□□□ -0.84
RFFL-207ENST00000580569 FECHP22830 423 aa9.78□□□□□ -0.84
RFFL-207ENST00000580569 FOXK1P85037 733 aa9.78□□□□□ -0.84
RFFL-207ENST00000580569 ATP8B2P98198 1209 aa9.78□□□□□ -0.84
RFFL-207ENST00000580569 TTLL12Q14166 644 aaPredicted RBP9.78□□□□□ -0.84
RFFL-207ENST00000580569 SLC4A10Q6U841 1118 aa9.78□□□□□ -0.84
RFFL-207ENST00000580569 PLEKHM2Q8IWE5 1019 aa9.78□□□□□ -0.84
RFFL-207ENST00000580569 TMC2Q8TDI7 906 aa9.78□□□□□ -0.84
RFFL-207ENST00000580569 SALL3Q9BXA9 1300 aa9.78□□□□□ -0.84
RFFL-207ENST00000580569 SCN4AP35499 1836 aa9.77□□□□□ -0.84
RFFL-207ENST00000580569 PRAMEF22A3QJZ6 481 aa9.77□□□□□ -0.85
RFFL-207ENST00000580569 GNAI3P08754 354 aa9.77□□□□□ -0.85
RFFL-207ENST00000580569 EIF2S2P20042 333 aaKnown RBP9.77□□□□□ -0.85
RFFL-207ENST00000580569 LMNB1P20700 586 aa9.77□□□□□ -0.85
RFFL-207ENST00000580569 BEND3Q5T5X7 828 aa9.77□□□□□ -0.85
RFFL-207ENST00000580569 CCDC82Q8N4S0 544 aa9.77□□□□□ -0.85
RFFL-207ENST00000580569 MS4A3Q96HJ5 214 aa9.77□□□□□ -0.85
RFFL-207ENST00000580569 GOPCQ9HD26 462 aa9.77□□□□□ -0.85
RFFL-207ENST00000580569 PRDM10Q9NQV6 1147 aa9.77□□□□□ -0.85
RFFL-207ENST00000580569 USP42Q9H9J4 1324 aaKnown RBP9.77□□□□□ -0.85
RFFL-207ENST00000580569 POTECB2RU33 542 aa9.76□□□□□ -0.85
RFFL-207ENST00000580569 PDIA4P13667 645 aaKnown RBP9.76□□□□□ -0.85
RFFL-207ENST00000580569 GSPT1P15170 499 aaKnown RBP9.76□□□□□ -0.85
RFFL-207ENST00000580569 TM4SF1P30408 202 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms