RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 MPNDQ8N594 471 aa25.76■■□□□ 1.71
SMG8-204ENST00000580498 ZNF428Q96B54 188 aa25.76■■□□□ 1.71
SMG8-204ENST00000580498 PI4KAP2A4QPH2 592 aa25.75■■□□□ 1.71
SMG8-204ENST00000580498 PPIP5K2O43314 1243 aa25.75■■□□□ 1.71
SMG8-204ENST00000580498 PCCAP05165 728 aaPredicted RBP25.75■■□□□ 1.71
SMG8-204ENST00000580498 PI4KAP1Q8N8J0 262 aa25.75■■□□□ 1.71
SMG8-204ENST00000580498 DDX60Q8IY21 1712 aaKnown RBP25.74■■□□□ 1.71
SMG8-204ENST00000580498 FZD9O00144 591 aa25.73■■□□□ 1.71
SMG8-204ENST00000580498 FKBP5Q13451 457 aaPredicted RBP25.73■■□□□ 1.71
SMG8-204ENST00000580498 CCDC152Q4G0S7 254 aa25.73■■□□□ 1.71
SMG8-204ENST00000580498 L3MBTL3Q96JM7 780 aaPredicted RBP25.73■■□□□ 1.71
SMG8-204ENST00000580498 SCN4AP35499 1836 aa25.72■■□□□ 1.71
SMG8-204ENST00000580498 LMOD1P29536 600 aaPredicted RBP25.72■■□□□ 1.71
SMG8-204ENST00000580498 EXOSC9Q06265 439 aaKnown RBP25.72■■□□□ 1.71
SMG8-204ENST00000580498 GPC2Q8N158 579 aa25.72■■□□□ 1.71
SMG8-204ENST00000580498 PDE8AO60658 829 aa25.71■■□□□ 1.71
SMG8-204ENST00000580498 FLIIQ13045 1269 aa25.71■■□□□ 1.71
SMG8-204ENST00000580498 HACL1Q9UJ83 578 aa25.71■■□□□ 1.71
SMG8-204ENST00000580498 SNED1Q8TER0 1413 aa25.71■■□□□ 1.71
SMG8-204ENST00000580498 ZNF541Q9H0D2 1346 aa25.69■■□□□ 1.7
SMG8-204ENST00000580498 RTFDC1Q9BY42 306 aaPredicted RBP25.69■■□□□ 1.7
SMG8-204ENST00000580498 GJA3Q9Y6H8 435 aa25.69■■□□□ 1.7
SMG8-204ENST00000580498 CDHR2Q9BYE9 1310 aa25.68■■□□□ 1.7
SMG8-204ENST00000580498 VAMP4O75379 141 aa25.68■■□□□ 1.7
SMG8-204ENST00000580498 PNMA8AQ86V59 439 aaPredicted RBP25.68■■□□□ 1.7
SMG8-204ENST00000580498 RPS8P62241 208 aaKnown RBP25.67■■□□□ 1.7
SMG8-204ENST00000580498 AOC3Q16853 763 aa25.67■■□□□ 1.7
SMG8-204ENST00000580498 CHADLQ6NUI6 762 aa25.67■■□□□ 1.7
SMG8-204ENST00000580498 EYA3Q99504 573 aa25.67■■□□□ 1.7
SMG8-204ENST00000580498 POTECB2RU33 542 aa25.66■■□□□ 1.7
SMG8-204ENST00000580498 LDHDQ86WU2 507 aa25.66■■□□□ 1.7
SMG8-204ENST00000580498 DNAAF4Q8WXU2 420 aa25.66■■□□□ 1.7
SMG8-204ENST00000580498 NSFL1CQ9UNZ2 370 aaKnown RBP25.66■■□□□ 1.7
SMG8-204ENST00000580498 CCER2I3L3R5 266 aa25.65■■□□□ 1.7
SMG8-204ENST00000580498 EAPPQ56P03 285 aaPredicted RBP25.65■■□□□ 1.7
SMG8-204ENST00000580498 CELF1Q92879 486 aaKnown RBP25.65■■□□□ 1.7
SMG8-204ENST00000580498 CDC5LQ99459 802 aaKnown RBP25.65■■□□□ 1.7
SMG8-204ENST00000580498 TAF1DQ9H5J8 278 aaPredicted RBP25.65■■□□□ 1.7
SMG8-204ENST00000580498 ZNRF3Q9ULT6 936 aa25.65■■□□□ 1.7
SMG8-204ENST00000580498 CLEC11AQ9Y240 323 aa25.65■■□□□ 1.7
SMG8-204ENST00000580498 NEURL1BA8MQ27 555 aa25.64■■□□□ 1.7
SMG8-204ENST00000580498 C6orf229H3BNL8 230 aa25.64■■□□□ 1.7
SMG8-204ENST00000580498 EPHX2P34913 555 aa25.64■■□□□ 1.7
SMG8-204ENST00000580498 KIAA2012Q0VF49 1180 aa25.64■■□□□ 1.7
SMG8-204ENST00000580498 G2E3Q7L622 706 aa25.64■■□□□ 1.7
SMG8-204ENST00000580498 E9PSI1 815 aa25.63■■□□□ 1.69
SMG8-204ENST00000580498 TNIP1Q15025 636 aa25.63■■□□□ 1.69
SMG8-204ENST00000580498 ANKRD18AQ8IVF6 992 aa25.63■■□□□ 1.69
SMG8-204ENST00000580498 TAF1P21675 1872 aa25.62■■□□□ 1.69
SMG8-204ENST00000580498 G3V3G9 751 aa25.62■■□□□ 1.69
SMG8-204ENST00000580498 IGKV5-2P06315 115 aa25.62■■□□□ 1.69
SMG8-204ENST00000580498 CTSWP56202 376 aa25.62■■□□□ 1.69
SMG8-204ENST00000580498 WASHC4Q2M389 1173 aa25.62■■□□□ 1.69
SMG8-204ENST00000580498 CWF19L2Q2TBE0 894 aaKnown RBP25.62■■□□□ 1.69
SMG8-204ENST00000580498 DCAF8Q5TAQ9 597 aa25.62■■□□□ 1.69
SMG8-204ENST00000580498 LINS1Q8NG48 757 aa25.62■■□□□ 1.69
SMG8-204ENST00000580498 ANKIB1Q9P2G1 1089 aa25.62■■□□□ 1.69
SMG8-204ENST00000580498 LRRC37AA6NMS7 1700 aa25.62■■□□□ 1.69
SMG8-204ENST00000580498 MYH3P11055 1940 aa25.61■■□□□ 1.69
SMG8-204ENST00000580498 UBE3BQ7Z3V4 1068 aa25.6■■□□□ 1.69
SMG8-204ENST00000580498 JARID2Q92833 1246 aaPredicted RBP25.6■■□□□ 1.69
SMG8-204ENST00000580498 GCKRQ14397 625 aa25.59■■□□□ 1.69
SMG8-204ENST00000580498 CIAPIN1Q6FI81 312 aa25.59■■□□□ 1.69
SMG8-204ENST00000580498 CCDC85AQ96PX6 553 aaPredicted RBP25.59■■□□□ 1.69
SMG8-204ENST00000580498 SPINK5Q9NQ38 1064 aaPredicted RBP25.59■■□□□ 1.69
SMG8-204ENST00000580498 BCL2L13Q9BXK5 485 aa25.58■■□□□ 1.69
SMG8-204ENST00000580498 ZC3H12CQ9C0D7 883 aaKnown RBP25.58■■□□□ 1.69
SMG8-204ENST00000580498 SEC31BQ9NQW1 1179 aa25.57■■□□□ 1.68
SMG8-204ENST00000580498 GGA1Q9UJY5 639 aa25.57■■□□□ 1.68
SMG8-204ENST00000580498 ZNF521Q96K83 1311 aa25.57■■□□□ 1.68
SMG8-204ENST00000580498 H7C1W4 665 aa25.56■■□□□ 1.68
SMG8-204ENST00000580498 IGHMBP2P38935 993 aaKnown RBP25.56■■□□□ 1.68
SMG8-204ENST00000580498 GPSM2P81274 684 aa25.56■■□□□ 1.68
SMG8-204ENST00000580498 UFL1O94874 794 aa25.55■■□□□ 1.68
SMG8-204ENST00000580498 CXCL9Q07325 125 aa25.55■■□□□ 1.68
SMG8-204ENST00000580498 USP50Q70EL3 339 aaPredicted RBP25.55■■□□□ 1.68
SMG8-204ENST00000580498 SLC51AQ86UW1 340 aa25.55■■□□□ 1.68
SMG8-204ENST00000580498 TTLL11Q8NHH1 800 aa25.55■■□□□ 1.68
SMG8-204ENST00000580498 PODXL2Q9NZ53 605 aa25.55■■□□□ 1.68
SMG8-204ENST00000580498 COL4A5P29400 1685 aa25.55■■□□□ 1.68
SMG8-204ENST00000580498 RIMBP2O15034 1052 aa25.54■■□□□ 1.68
SMG8-204ENST00000580498 XDHP47989 1333 aa25.54■■□□□ 1.68
SMG8-204ENST00000580498 RTL9Q8NET4 1388 aa25.54■■□□□ 1.68
SMG8-204ENST00000580498 RAD17O75943 681 aa25.53■■□□□ 1.68
SMG8-204ENST00000580498 TBC1D16Q8TBP0 767 aa25.53■■□□□ 1.68
SMG8-204ENST00000580498 PLA2G12BQ9BX93 195 aa25.53■■□□□ 1.68
SMG8-204ENST00000580498 ADARB2Q9NS39 739 aaKnown RBP25.53■■□□□ 1.68
SMG8-204ENST00000580498 POTEIP0CG38 1075 aa25.52■■□□□ 1.68
SMG8-204ENST00000580498 POTEJP0CG39 1038 aa25.52■■□□□ 1.68
SMG8-204ENST00000580498 ATP2B4P23634 1241 aa25.52■■□□□ 1.68
SMG8-204ENST00000580498 SCNN1DP51172 638 aa25.52■■□□□ 1.68
SMG8-204ENST00000580498 SLC4A10Q6U841 1118 aa25.52■■□□□ 1.68
SMG8-204ENST00000580498 KLRG1Q96E93 195 aa25.52■■□□□ 1.68
SMG8-204ENST00000580498 MPHOSPH8Q99549 860 aa25.52■■□□□ 1.68
SMG8-204ENST00000580498 C9orf78Q9NZ63 289 aaPredicted RBP25.52■■□□□ 1.68
SMG8-204ENST00000580498 POLLQ9UGP5 575 aa25.52■■□□□ 1.68
SMG8-204ENST00000580498 GREM2Q9H772 168 aa25.51■■□□□ 1.67
SMG8-204ENST00000580498 BSDC1Q9NW68 430 aaPredicted RBP25.51■■□□□ 1.67
SMG8-204ENST00000580498 GPRC5DQ9NZD1 345 aa25.51■■□□□ 1.67
SMG8-204ENST00000580498 F6X3S4 739 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms