RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 RC3H1Q5TC82 1133 aaKnown RBP18.12■□□□□ 0.49
CDK5RAP3-218ENST00000580391 BCL11BQ9C0K0 894 aaPredicted RBP18.12■□□□□ 0.49
CDK5RAP3-218ENST00000580391 DBNLQ9UJU6 430 aaKnown RBP18.12■□□□□ 0.49
CDK5RAP3-218ENST00000580391 NIP7Q9Y221 180 aaKnown RBP eCLIP18.12■□□□□ 0.49
CDK5RAP3-218ENST00000580391 GNPATO15228 680 aa18.11■□□□□ 0.49
CDK5RAP3-218ENST00000580391 CNTROBQ8N137 903 aa18.11■□□□□ 0.49
CDK5RAP3-218ENST00000580391 TTLL11Q8NHH1 800 aa18.11■□□□□ 0.49
CDK5RAP3-218ENST00000580391 GREM2Q9H772 168 aa18.11■□□□□ 0.49
CDK5RAP3-218ENST00000580391 IL15P40933 162 aaPredicted RBP18.11■□□□□ 0.49
CDK5RAP3-218ENST00000580391 PARP10Q53GL7 1025 aa18.11■□□□□ 0.49
CDK5RAP3-218ENST00000580391 ERICH6Q7L0X2 663 aa18.11■□□□□ 0.49
CDK5RAP3-218ENST00000580391 AMIGO3Q86WK7 504 aa18.11■□□□□ 0.49
CDK5RAP3-218ENST00000580391 SH3TC1Q8TE82 1336 aa18.11■□□□□ 0.49
CDK5RAP3-218ENST00000580391 ZNF652Q9Y2D9 606 aa18.11■□□□□ 0.49
CDK5RAP3-218ENST00000580391 RIC1Q4ADV7 1423 aa18.1■□□□□ 0.49
CDK5RAP3-218ENST00000580391 PDE8AO60658 829 aa18.1■□□□□ 0.49
CDK5RAP3-218ENST00000580391 RPS6KA4O75676 772 aa18.1■□□□□ 0.49
CDK5RAP3-218ENST00000580391 CIAO1O76071 339 aa18.1■□□□□ 0.49
CDK5RAP3-218ENST00000580391 NTSR2O95665 410 aa18.1■□□□□ 0.49
CDK5RAP3-218ENST00000580391 ESYT1Q9BSJ8 1104 aa18.1■□□□□ 0.49
CDK5RAP3-218ENST00000580391 UTP14AQ9BVJ6 771 aaKnown RBP18.1■□□□□ 0.49
CDK5RAP3-218ENST00000580391 IFIT5Q13325 482 aaKnown RBP18.1■□□□□ 0.49
CDK5RAP3-218ENST00000580391 ZNF772Q68DY9 489 aaPredicted RBP18.1■□□□□ 0.49
CDK5RAP3-218ENST00000580391 EIF5BO60841 1220 aaKnown RBP18.09■□□□□ 0.49
CDK5RAP3-218ENST00000580391 HCLS1P14317 486 aaPredicted RBP18.09■□□□□ 0.49
CDK5RAP3-218ENST00000580391 ITGA6P23229 1130 aa18.09■□□□□ 0.49
CDK5RAP3-218ENST00000580391 RBM6P78332 1123 aaKnown RBP18.09■□□□□ 0.49
CDK5RAP3-218ENST00000580391 FAM196AQ6ZSG2 479 aa18.09■□□□□ 0.49
CDK5RAP3-218ENST00000580391 DBNDD2Q9BQY9 259 aa18.09■□□□□ 0.49
CDK5RAP3-218ENST00000580391 USP26Q9BXU7 913 aa18.09■□□□□ 0.49
CDK5RAP3-218ENST00000580391 IL25Q9H293 177 aa18.09■□□□□ 0.49
CDK5RAP3-218ENST00000580391 TAF7LQ5H9L4 462 aa18.08■□□□□ 0.49
CDK5RAP3-218ENST00000580391 CLEC4GQ6UXB4 293 aa18.08■□□□□ 0.49
CDK5RAP3-218ENST00000580391 KIF2CQ99661 725 aa18.08■□□□□ 0.49
CDK5RAP3-218ENST00000580391 BCL2L12Q9HB09 334 aa18.08■□□□□ 0.49
CDK5RAP3-218ENST00000580391 LRRC4BQ9NT99 713 aa18.08■□□□□ 0.49
CDK5RAP3-218ENST00000580391 SRP68Q9UHB9 627 aaKnown RBP18.08■□□□□ 0.49
CDK5RAP3-218ENST00000580391 REC8O95072 547 aa18.08■□□□□ 0.48
CDK5RAP3-218ENST00000580391 BOLA2Q9H3K6 86 aa18.08■□□□□ 0.48
CDK5RAP3-218ENST00000580391 TRIM37O94972 964 aa18.07■□□□□ 0.48
CDK5RAP3-218ENST00000580391 USPL1Q5W0Q7 1092 aa18.07■□□□□ 0.48
CDK5RAP3-218ENST00000580391 RTCBQ9Y3I0 505 aaKnown RBP18.07■□□□□ 0.48
CDK5RAP3-218ENST00000580391 TAF1P21675 1872 aa18.06■□□□□ 0.48
CDK5RAP3-218ENST00000580391 COL4A1P02462 1669 aa18.06■□□□□ 0.48
CDK5RAP3-218ENST00000580391 ANKRD18BA2A2Z9 1011 aa18.06■□□□□ 0.48
CDK5RAP3-218ENST00000580391 GPR108Q9NPR9 543 aa18.06■□□□□ 0.48
CDK5RAP3-218ENST00000580391 DAXXQ9UER7 740 aaPredicted RBP18.06■□□□□ 0.48
CDK5RAP3-218ENST00000580391 NARFQ9UHQ1 456 aa18.06■□□□□ 0.48
CDK5RAP3-218ENST00000580391 FBXO3Q9UK99 471 aa18.06■□□□□ 0.48
CDK5RAP3-218ENST00000580391 TBC1D2Q9BYX2 928 aa18.06■□□□□ 0.48
CDK5RAP3-218ENST00000580391 A0A1B0GUL6 1792 aa18.05■□□□□ 0.48
CDK5RAP3-218ENST00000580391 BECN1Q14457 450 aa18.05■□□□□ 0.48
CDK5RAP3-218ENST00000580391 TBC1D9BQ66K14 1250 aa18.05■□□□□ 0.48
CDK5RAP3-218ENST00000580391 BICDL1Q6ZP65 573 aa18.05■□□□□ 0.48
CDK5RAP3-218ENST00000580391 AK7Q96M32 723 aa18.05■□□□□ 0.48
CDK5RAP3-218ENST00000580391 ARAP2Q8WZ64 1704 aa18.05■□□□□ 0.48
CDK5RAP3-218ENST00000580391 A0A1B0GUL7 405 aa18.04■□□□□ 0.48
CDK5RAP3-218ENST00000580391 ATP5JP18859 108 aa18.04■□□□□ 0.48
CDK5RAP3-218ENST00000580391 TIMM10P62072 90 aa18.04■□□□□ 0.48
CDK5RAP3-218ENST00000580391 EVI5LQ96CN4 794 aa18.04■□□□□ 0.48
CDK5RAP3-218ENST00000580391 NEUROD6Q96NK8 337 aa18.04■□□□□ 0.48
CDK5RAP3-218ENST00000580391 CEP126Q9P2H0 1117 aa18.04■□□□□ 0.48
CDK5RAP3-218ENST00000580391 RGL2O15211 777 aa18.04■□□□□ 0.48
CDK5RAP3-218ENST00000580391 PHF14O94880 888 aa18.04■□□□□ 0.48
CDK5RAP3-218ENST00000580391 ARHGEF1Q92888 912 aaKnown RBP18.04■□□□□ 0.48
CDK5RAP3-218ENST00000580391 LDHAL6AQ6ZMR3 332 aa18.03■□□□□ 0.48
CDK5RAP3-218ENST00000580391 EDC3Q96F86 508 aaKnown RBP18.03■□□□□ 0.48
CDK5RAP3-218ENST00000580391 ANO2Q9NQ90 1003 aa18.03■□□□□ 0.48
CDK5RAP3-218ENST00000580391 NDUFB9Q9Y6M9 179 aa18.03■□□□□ 0.48
CDK5RAP3-218ENST00000580391 ABCC12Q96J65 1359 aa18.02■□□□□ 0.48
CDK5RAP3-218ENST00000580391 ZPR1O75312 459 aa18.02■□□□□ 0.48
CDK5RAP3-218ENST00000580391 RIPOR2Q9Y4F9 1068 aa18.02■□□□□ 0.48
CDK5RAP3-218ENST00000580391 TNS1Q9HBL0 1735 aaKnown RBP18.02■□□□□ 0.48
CDK5RAP3-218ENST00000580391 SGSM2O43147 1006 aa18.02■□□□□ 0.47
CDK5RAP3-218ENST00000580391 ERFEQ4G0M1 354 aa18.02■□□□□ 0.47
CDK5RAP3-218ENST00000580391 CWC27Q6UX04 472 aaKnown RBP18.02■□□□□ 0.47
CDK5RAP3-218ENST00000580391 CNNM1Q9NRU3 951 aa18.02■□□□□ 0.47
CDK5RAP3-218ENST00000580391 DIAPH3Q9NSV4 1193 aa18.02■□□□□ 0.47
CDK5RAP3-218ENST00000580391 METTL24Q5JXM2 366 aa18.01■□□□□ 0.47
CDK5RAP3-218ENST00000580391 SEC31BQ9NQW1 1179 aa18.01■□□□□ 0.47
CDK5RAP3-218ENST00000580391 TNRC6CQ9HCJ0 1690 aaKnown RBP18.01■□□□□ 0.47
CDK5RAP3-218ENST00000580391 ADORA1P30542 326 aa18■□□□□ 0.47
CDK5RAP3-218ENST00000580391 DNAJC2Q99543 621 aaKnown RBP18■□□□□ 0.47
CDK5RAP3-218ENST00000580391 FSD1Q9BTV5 496 aa18■□□□□ 0.47
CDK5RAP3-218ENST00000580391 AKAP11Q9UKA4 1901 aa18■□□□□ 0.47
CDK5RAP3-218ENST00000580391 RTL9Q8NET4 1388 aa18■□□□□ 0.47
CDK5RAP3-218ENST00000580391 VGLL2Q8N8G2 317 aa18■□□□□ 0.47
CDK5RAP3-218ENST00000580391 MYH7P12883 1935 aa18■□□□□ 0.47
CDK5RAP3-218ENST00000580391 CCDC152Q4G0S7 254 aa17.99■□□□□ 0.47
CDK5RAP3-218ENST00000580391 SLC27A3Q5K4L6 730 aa17.99■□□□□ 0.47
CDK5RAP3-218ENST00000580391 C3orf67Q6ZVT6 689 aa17.99■□□□□ 0.47
CDK5RAP3-218ENST00000580391 HAUS7Q99871 368 aa17.99■□□□□ 0.47
CDK5RAP3-218ENST00000580391 CD2BP2O95400 341 aaKnown RBP17.99■□□□□ 0.47
CDK5RAP3-218ENST00000580391 HSP90B1P14625 803 aaKnown RBP17.99■□□□□ 0.47
CDK5RAP3-218ENST00000580391 RFC4P35249 363 aa17.99■□□□□ 0.47
CDK5RAP3-218ENST00000580391 TRAPPC3LQ5T215 181 aa17.99■□□□□ 0.47
CDK5RAP3-218ENST00000580391 AKAP2Q9Y2D5 859 aa17.99■□□□□ 0.47
CDK5RAP3-218ENST00000580391 RXRBP28702 533 aa17.98■□□□□ 0.47
CDK5RAP3-218ENST00000580391 ATP2B3Q16720 1220 aa17.98■□□□□ 0.47
CDK5RAP3-218ENST00000580391 HSCBQ8IWL3 235 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms