RNA–Protein interactions for RNA: ENST00000580179.2

EPB41L3-217, Transcript of erythrocyte membrane protein band 4.1 like 3, human

TSL 4

Gene EPB41L3, Length 496 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EPB41L3-217	ENST00000580179	HDAC5	Q9UQL6	1122 aa		33.39	■■■□□ 2.94
EPB41L3-217	ENST00000580179	PLIN1	O60240	522 aa		33.37	■■■□□ 2.93
EPB41L3-217	ENST00000580179	BRCA1	P38398	1863 aa	Known RBP	33.36	■■■□□ 2.93
EPB41L3-217	ENST00000580179	TTLL11	Q8NHH1	800 aa		33.35	■■■□□ 2.93
EPB41L3-217	ENST00000580179	GNAI3	P08754	354 aa		33.34	■■■□□ 2.93
EPB41L3-217	ENST00000580179	UBTFL1	P0CB47	393 aa	Predicted RBP	33.34	■■■□□ 2.93
EPB41L3-217	ENST00000580179	RLBP1	P12271	317 aa		33.34	■■■□□ 2.93
EPB41L3-217	ENST00000580179	PRPF40B	Q6NWY9	871 aa	Known RBP	33.34	■■■□□ 2.93
EPB41L3-217	ENST00000580179	SUCLG2	Q96I99	432 aa		33.34	■■■□□ 2.93
EPB41L3-217	ENST00000580179	FOXO4	P98177	505 aa		33.33	■■■□□ 2.93
EPB41L3-217	ENST00000580179	ITPRIP	Q8IWB1	547 aa		33.33	■■■□□ 2.93
EPB41L3-217	ENST00000580179	GRIN3B	O60391	1043 aa		33.32	■■■□□ 2.92
EPB41L3-217	ENST00000580179	CSF1R	P07333	972 aa		33.32	■■■□□ 2.92
EPB41L3-217	ENST00000580179	YBX3	P16989	372 aa	Known RBP eCLIP	33.32	■■■□□ 2.92
EPB41L3-217	ENST00000580179	GRAP	Q13588	217 aa		33.32	■■■□□ 2.92
EPB41L3-217	ENST00000580179	PDE3A	Q14432	1141 aa		33.32	■■■□□ 2.92
EPB41L3-217	ENST00000580179	GRAPL	Q8TC17	118 aa	Predicted RBP	33.32	■■■□□ 2.92
EPB41L3-217	ENST00000580179	PANK1	Q8TE04	598 aa		33.32	■■■□□ 2.92
EPB41L3-217	ENST00000580179	BBOX1	O75936	387 aa		33.31	■■■□□ 2.92
EPB41L3-217	ENST00000580179	CCDC85A	Q96PX6	553 aa	Predicted RBP	33.31	■■■□□ 2.92
EPB41L3-217	ENST00000580179	MEIS3	Q99687	375 aa		33.31	■■■□□ 2.92
EPB41L3-217	ENST00000580179	SRCAP	Q6ZRS2	3230 aa		33.3	■■■□□ 2.92
EPB41L3-217	ENST00000580179	RTL9	Q8NET4	1388 aa		33.3	■■■□□ 2.92
EPB41L3-217	ENST00000580179	RRP1	P56182	461 aa	Known RBP	33.29	■■■□□ 2.92
EPB41L3-217	ENST00000580179	LMBR1L	Q6UX01	489 aa		33.29	■■■□□ 2.92
EPB41L3-217	ENST00000580179	MYH3	P11055	1940 aa		33.28	■■■□□ 2.92
EPB41L3-217	ENST00000580179	EPHA10	Q5JZY3	1008 aa		33.28	■■■□□ 2.92
EPB41L3-217	ENST00000580179	SOGA3	Q5TF21	947 aa		33.28	■■■□□ 2.92
EPB41L3-217	ENST00000580179	KAZALD1	Q96I82	304 aa		33.28	■■■□□ 2.92
EPB41L3-217	ENST00000580179	GREM2	Q9H772	168 aa		33.28	■■■□□ 2.92
EPB41L3-217	ENST00000580179	CHMP3	Q9Y3E7	222 aa		33.28	■■■□□ 2.92
EPB41L3-217	ENST00000580179	PPEF1	O14829	653 aa	Predicted RBP	33.27	■■■□□ 2.92
EPB41L3-217	ENST00000580179	C21orf2	O43822	256 aa		33.27	■■■□□ 2.92
EPB41L3-217	ENST00000580179	TMC4	Q7Z404	712 aa		33.27	■■■□□ 2.92
EPB41L3-217	ENST00000580179	CDC5L	Q99459	802 aa	Known RBP	33.27	■■■□□ 2.92
EPB41L3-217	ENST00000580179	TMX4	Q9H1E5	349 aa	Predicted RBP	33.27	■■■□□ 2.92
EPB41L3-217	ENST00000580179	BICC1	Q9H694	974 aa	Known RBP	33.27	■■■□□ 2.92
EPB41L3-217	ENST00000580179	SEC31B	Q9NQW1	1179 aa		33.27	■■■□□ 2.92
EPB41L3-217	ENST00000580179	RPS8	P62241	208 aa	Known RBP	33.26	■■■□□ 2.91
EPB41L3-217	ENST00000580179	ZNF219	Q9P2Y4	722 aa	Predicted RBP	33.26	■■■□□ 2.91
EPB41L3-217	ENST00000580179	MVP	Q14764	893 aa	Known RBP	33.25	■■■□□ 2.91
EPB41L3-217	ENST00000580179	RABL6	Q3YEC7	729 aa	Predicted RBP	33.25	■■■□□ 2.91
EPB41L3-217	ENST00000580179	CC2D2B	Q6DHV5	1058 aa		33.25	■■■□□ 2.91
EPB41L3-217	ENST00000580179	CELF1	Q92879	486 aa	Known RBP	33.25	■■■□□ 2.91
EPB41L3-217	ENST00000580179	SLX4	Q8IY92	1834 aa		33.25	■■■□□ 2.91
EPB41L3-217	ENST00000580179	ARFGEF1	Q9Y6D6	1849 aa		33.25	■■■□□ 2.91
EPB41L3-217	ENST00000580179	ANKRD18B	A2A2Z9	1011 aa		33.24	■■■□□ 2.91
EPB41L3-217	ENST00000580179	ITGA6	P23229	1130 aa		33.24	■■■□□ 2.91
EPB41L3-217	ENST00000580179	IFIT5	Q13325	482 aa	Known RBP	33.24	■■■□□ 2.91
EPB41L3-217	ENST00000580179	FAM161A	Q3B820	660 aa		33.24	■■■□□ 2.91
EPB41L3-217	ENST00000580179	ANKRD18A	Q8IVF6	992 aa		33.24	■■■□□ 2.91
EPB41L3-217	ENST00000580179	C7orf43	Q8WVR3	580 aa		33.24	■■■□□ 2.91
EPB41L3-217	ENST00000580179	CHMP4B	Q9H444	224 aa	Known RBP	33.24	■■■□□ 2.91
EPB41L3-217	ENST00000580179	DDX19B	Q9UMR2	479 aa		33.24	■■■□□ 2.91
EPB41L3-217	ENST00000580179	CACNA1S	Q13698	1873 aa		33.23	■■■□□ 2.91
EPB41L3-217	ENST00000580179	ZBTB7B	O15156	539 aa	Predicted RBP	33.23	■■■□□ 2.91
EPB41L3-217	ENST00000580179	CCDC57	Q2TAC2	916 aa		33.23	■■■□□ 2.91
EPB41L3-217	ENST00000580179	COG6	Q9Y2V7	657 aa		33.23	■■■□□ 2.91
EPB41L3-217	ENST00000580179	LRRFIP2	Q9Y608	721 aa	Known RBP	33.23	■■■□□ 2.91
EPB41L3-217	ENST00000580179	GNAI2	P04899	355 aa		33.22	■■■□□ 2.91
EPB41L3-217	ENST00000580179	C20orf194	Q5TEA3	1177 aa		33.22	■■■□□ 2.91
EPB41L3-217	ENST00000580179	SP8	Q8IXZ3	490 aa		33.22	■■■□□ 2.91
EPB41L3-217	ENST00000580179	ATP6V0A2	Q9Y487	856 aa		33.22	■■■□□ 2.91
EPB41L3-217	ENST00000580179	GRIPAP1	Q4V328	841 aa		33.21	■■■□□ 2.91
EPB41L3-217	ENST00000580179	CCDC93	Q567U6	631 aa		33.21	■■■□□ 2.91
EPB41L3-217	ENST00000580179	ARHGAP27	Q6ZUM4	889 aa		33.21	■■■□□ 2.91
EPB41L3-217	ENST00000580179	ANKRD44	Q8N8A2	993 aa		33.21	■■■□□ 2.91
EPB41L3-217	ENST00000580179	IGHMBP2	P38935	993 aa	Known RBP	33.2	■■■□□ 2.91
EPB41L3-217	ENST00000580179	RTKN2	Q8IZC4	609 aa		33.19	■■■□□ 2.9
EPB41L3-217	ENST00000580179	TAF7L	Q5H9L4	462 aa		33.18	■■■□□ 2.9
EPB41L3-217	ENST00000580179	MPHOSPH8	Q99549	860 aa		33.16	■■■□□ 2.9
EPB41L3-217	ENST00000580179	BSDC1	Q9NW68	430 aa	Predicted RBP	33.16	■■■□□ 2.9
EPB41L3-217	ENST00000580179	SUPT16H	Q9Y5B9	1047 aa	Known RBP	33.16	■■■□□ 2.9
EPB41L3-217	ENST00000580179	TAF1	P21675	1872 aa		33.15	■■■□□ 2.9
EPB41L3-217	ENST00000580179	OLFM4	Q6UX06	510 aa		33.14	■■■□□ 2.9
EPB41L3-217	ENST00000580179	COL4A1	P02462	1669 aa		33.11	■■■□□ 2.89
EPB41L3-217	ENST00000580179	MPND	Q8N594	471 aa		33.11	■■■□□ 2.89
EPB41L3-217	ENST00000580179	TAOK3	Q9H2K8	898 aa		33.11	■■■□□ 2.89
EPB41L3-217	ENST00000580179	LTBP3	Q9NS15	1303 aa		33.1	■■■□□ 2.89
EPB41L3-217	ENST00000580179	FKBP4	Q02790	459 aa	Known RBP eCLIP	33.1	■■■□□ 2.89
EPB41L3-217	ENST00000580179	MTX1	Q13505	466 aa		33.1	■■■□□ 2.89
EPB41L3-217	ENST00000580179	NFKBIE	O00221	500 aa		33.09	■■■□□ 2.89
EPB41L3-217	ENST00000580179	DPP8	Q6V1X1	898 aa	Predicted RBP	33.09	■■■□□ 2.89
EPB41L3-217	ENST00000580179	LDHAL6A	Q6ZMR3	332 aa		33.09	■■■□□ 2.89
EPB41L3-217	ENST00000580179	ZNF594	Q96JF6	807 aa	Predicted RBP	33.09	■■■□□ 2.89
EPB41L3-217	ENST00000580179	PSMD1	Q99460	953 aa		33.08	■■■□□ 2.89
EPB41L3-217	ENST00000580179	C1orf115	Q9H7X2	142 aa		33.08	■■■□□ 2.89
EPB41L3-217	ENST00000580179	ZBTB40	Q9NUA8	1239 aa		33.08	■■■□□ 2.89
EPB41L3-217	ENST00000580179	NSFL1C	Q9UNZ2	370 aa	Known RBP	33.08	■■■□□ 2.89
EPB41L3-217	ENST00000580179	SRGAP3	O43295	1099 aa		33.07	■■■□□ 2.88
EPB41L3-217	ENST00000580179	SUPT20H	Q8NEM7	779 aa		33.07	■■■□□ 2.88
EPB41L3-217	ENST00000580179	CNNM1	Q9NRU3	951 aa		33.07	■■■□□ 2.88
EPB41L3-217	ENST00000580179	MINPP1	Q9UNW1	487 aa		33.07	■■■□□ 2.88
EPB41L3-217	ENST00000580179	LRRC37A	A6NMS7	1700 aa		33.06	■■■□□ 2.88
EPB41L3-217	ENST00000580179	SNED1	Q8TER0	1413 aa		33.06	■■■□□ 2.88
EPB41L3-217	ENST00000580179	RASSF7	Q02833	373 aa		33.06	■■■□□ 2.88
EPB41L3-217	ENST00000580179	ANKIB1	Q9P2G1	1089 aa		33.06	■■■□□ 2.88
EPB41L3-217	ENST00000580179	FER1L6	Q2WGJ9	1857 aa		33.05	■■■□□ 2.88
EPB41L3-217	ENST00000580179	RFX5	P48382	616 aa	Predicted RBP	33.05	■■■□□ 2.88
EPB41L3-217	ENST00000580179	GPSM2	P81274	684 aa		33.05	■■■□□ 2.88

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms