RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 SH3PXD2AQ5TCZ1 1133 aa5.98□□□□□ -1.45
KPNB1-208ENST00000580019 VSIG10LQ86VR7 867 aa5.98□□□□□ -1.45
KPNB1-208ENST00000580019 CLEC10AQ8IUN9 316 aa5.98□□□□□ -1.45
KPNB1-208ENST00000580019 ARXQ96QS3 562 aa5.98□□□□□ -1.45
KPNB1-208ENST00000580019 FAM117AQ9C073 453 aa5.98□□□□□ -1.45
KPNB1-208ENST00000580019 SMG9Q9H0W8 520 aaKnown RBP5.98□□□□□ -1.45
KPNB1-208ENST00000580019 PIM2Q9P1W9 311 aa5.98□□□□□ -1.45
KPNB1-208ENST00000580019 WDR64B1ANS9 1081 aa5.97□□□□□ -1.45
KPNB1-208ENST00000580019 MAP3K6O95382 1288 aa5.97□□□□□ -1.45
KPNB1-208ENST00000580019 PRNPP04156 253 aa5.97□□□□□ -1.45
KPNB1-208ENST00000580019 BTLAQ7Z6A9 289 aa5.97□□□□□ -1.45
KPNB1-208ENST00000580019 TRPM4Q8TD43 1214 aa5.97□□□□□ -1.45
KPNB1-208ENST00000580019 FAM46AQ96IP4 442 aaKnown RBP5.97□□□□□ -1.45
KPNB1-208ENST00000580019 MYRFLQ96LU7 910 aa5.97□□□□□ -1.45
KPNB1-208ENST00000580019 FAM83CQ9BQN1 747 aa5.97□□□□□ -1.45
KPNB1-208ENST00000580019 TBCELQ5QJ74 424 aa5.96□□□□□ -1.46
KPNB1-208ENST00000580019 ERICH6Q7L0X2 663 aa5.96□□□□□ -1.46
KPNB1-208ENST00000580019 PLPP7Q8NBV4 271 aa5.96□□□□□ -1.46
KPNB1-208ENST00000580019 PHACTR1Q9C0D0 580 aa5.96□□□□□ -1.46
KPNB1-208ENST00000580019 ZBTB42B2RXF5 422 aa5.95□□□□□ -1.46
KPNB1-208ENST00000580019 BUD31P41223 144 aaPredicted RBP5.95□□□□□ -1.46
KPNB1-208ENST00000580019 HIRAP54198 1017 aaPredicted RBP5.95□□□□□ -1.46
KPNB1-208ENST00000580019 EPHA4P54764 986 aa5.95□□□□□ -1.46
KPNB1-208ENST00000580019 GPLD1P80108 840 aa5.95□□□□□ -1.46
KPNB1-208ENST00000580019 SETDB1Q15047 1291 aa5.95□□□□□ -1.46
KPNB1-208ENST00000580019 MSMPQ1L6U9 139 aa5.95□□□□□ -1.46
KPNB1-208ENST00000580019 KSR1Q8IVT5 923 aa5.95□□□□□ -1.46
KPNB1-208ENST00000580019 ZNF358Q9NW07 568 aa5.95□□□□□ -1.46
KPNB1-208ENST00000580019 CHMP3Q9Y3E7 222 aa5.95□□□□□ -1.46
KPNB1-208ENST00000580019 PCDHGA11Q9Y5H2 935 aa5.95□□□□□ -1.46
KPNB1-208ENST00000580019 APBB1O00213 710 aa5.94□□□□□ -1.46
KPNB1-208ENST00000580019 PAPLNO95428 1278 aa5.94□□□□□ -1.46
KPNB1-208ENST00000580019 MLLT1Q03111 559 aaPredicted RBP5.94□□□□□ -1.46
KPNB1-208ENST00000580019 COL19A1Q14993 1142 aa5.94□□□□□ -1.46
KPNB1-208ENST00000580019 HIF1AQ16665 826 aa5.94□□□□□ -1.46
KPNB1-208ENST00000580019 NFXL1Q6ZNB6 911 aa5.94□□□□□ -1.46
KPNB1-208ENST00000580019 DHX32Q7L7V1 743 aaKnown RBP5.94□□□□□ -1.46
KPNB1-208ENST00000580019 FAM20CQ8IXL6 584 aa5.94□□□□□ -1.46
KPNB1-208ENST00000580019 IL22RA1Q8N6P7 574 aa5.94□□□□□ -1.46
KPNB1-208ENST00000580019 GIMAP7Q8NHV1 300 aa5.94□□□□□ -1.46
KPNB1-208ENST00000580019 LEMD3Q9Y2U8 911 aa5.94□□□□□ -1.46
KPNB1-208ENST00000580019 HCN4Q9Y3Q4 1203 aa5.94□□□□□ -1.46
KPNB1-208ENST00000580019 PSMA6P60900 246 aaKnown RBP5.93□□□□□ -1.46
KPNB1-208ENST00000580019 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.93□□□□□ -1.46
KPNB1-208ENST00000580019 AGBL5Q8NDL9 886 aa5.93□□□□□ -1.46
KPNB1-208ENST00000580019 FOSL1P15407 271 aa5.92□□□□□ -1.46
KPNB1-208ENST00000580019 EIF2AK2P19525 551 aaKnown RBP5.92□□□□□ -1.46
KPNB1-208ENST00000580019 ARID4AP29374 1257 aaPredicted RBP5.92□□□□□ -1.46
KPNB1-208ENST00000580019 BEND4Q6ZU67 534 aa5.92□□□□□ -1.46
KPNB1-208ENST00000580019 ACAD11Q709F0 780 aa5.92□□□□□ -1.46
KPNB1-208ENST00000580019 TNS4Q8IZW8 715 aa5.92□□□□□ -1.46
KPNB1-208ENST00000580019 PCMTD1Q96MG8 357 aaPredicted RBP5.92□□□□□ -1.46
KPNB1-208ENST00000580019 SLC38A3Q99624 504 aa5.92□□□□□ -1.46
KPNB1-208ENST00000580019 KDM4CQ9H3R0 1056 aa5.92□□□□□ -1.46
KPNB1-208ENST00000580019 ATG3Q9NT62 314 aa5.92□□□□□ -1.46
KPNB1-208ENST00000580019 BIN1O00499 593 aa5.91□□□□□ -1.46
KPNB1-208ENST00000580019 GDF6Q6KF10 455 aaPredicted RBP5.91□□□□□ -1.46
KPNB1-208ENST00000580019 KCNF1Q9H3M0 494 aa5.91□□□□□ -1.46
KPNB1-208ENST00000580019 TIMELESSQ9UNS1 1208 aa5.91□□□□□ -1.46
KPNB1-208ENST00000580019 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.91□□□□□ -1.46
KPNB1-208ENST00000580019 WISP1O95388 367 aa5.9□□□□□ -1.46
KPNB1-208ENST00000580019 POTEAQ6S8J7 498 aa5.9□□□□□ -1.46
KPNB1-208ENST00000580019 MUC3BQ9H195 1237 aa5.9□□□□□ -1.46
KPNB1-208ENST00000580019 JAG2Q9Y219 1238 aa5.9□□□□□ -1.46
KPNB1-208ENST00000580019 BMP3P12645 472 aa5.89□□□□□ -1.47
KPNB1-208ENST00000580019 PSME1Q06323 249 aa5.89□□□□□ -1.47
KPNB1-208ENST00000580019 CPSF6Q16630 551 aaKnown RBP eCLIP5.89□□□□□ -1.47
KPNB1-208ENST00000580019 HFE2Q6ZVN8 426 aa5.89□□□□□ -1.47
KPNB1-208ENST00000580019 MTMR14Q8NCE2 650 aa5.89□□□□□ -1.47
KPNB1-208ENST00000580019 PLD4Q96BZ4 506 aa5.89□□□□□ -1.47
KPNB1-208ENST00000580019 MFSD14AQ96MC6 490 aa5.89□□□□□ -1.47
KPNB1-208ENST00000580019 ZFATQ9P243 1243 aa5.89□□□□□ -1.47
KPNB1-208ENST00000580019 EPB42P16452 691 aa5.88□□□□□ -1.47
KPNB1-208ENST00000580019 GRNP28799 593 aaKnown RBP5.88□□□□□ -1.47
KPNB1-208ENST00000580019 NRLP54845 237 aa5.88□□□□□ -1.47
KPNB1-208ENST00000580019 IER5Q5VY09 327 aa5.88□□□□□ -1.47
KPNB1-208ENST00000580019 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.88□□□□□ -1.47
KPNB1-208ENST00000580019 KRT25Q7Z3Z0 450 aa5.88□□□□□ -1.47
KPNB1-208ENST00000580019 BANK1Q8NDB2 785 aa5.88□□□□□ -1.47
KPNB1-208ENST00000580019 FLCNQ8NFG4 579 aa5.88□□□□□ -1.47
KPNB1-208ENST00000580019 OSBPL1AQ9BXW6 950 aa5.88□□□□□ -1.47
KPNB1-208ENST00000580019 BSDC1Q9NW68 430 aaPredicted RBP5.88□□□□□ -1.47
KPNB1-208ENST00000580019 GTF3C3Q9Y5Q9 886 aa5.88□□□□□ -1.47
KPNB1-208ENST00000580019 CARMIL2Q6F5E8 1435 aa5.88□□□□□ -1.47
KPNB1-208ENST00000580019 SART1O43290 800 aaKnown RBP5.87□□□□□ -1.47
KPNB1-208ENST00000580019 CD68P34810 354 aaPredicted RBP5.87□□□□□ -1.47
KPNB1-208ENST00000580019 GTF2IP78347 998 aa5.87□□□□□ -1.47
KPNB1-208ENST00000580019 CACTIN-AS1Q8N1I8 211 aa5.87□□□□□ -1.47
KPNB1-208ENST00000580019 TOX2Q96NM4 488 aa5.87□□□□□ -1.47
KPNB1-208ENST00000580019 GOPCQ9HD26 462 aa5.87□□□□□ -1.47
KPNB1-208ENST00000580019 HIF3AQ9Y2N7 669 aa5.87□□□□□ -1.47
KPNB1-208ENST00000580019 RARAP10276 462 aa5.86□□□□□ -1.47
KPNB1-208ENST00000580019 TMEM132AQ24JP5 1023 aa5.86□□□□□ -1.47
KPNB1-208ENST00000580019 EML3Q32P44 896 aa5.86□□□□□ -1.47
KPNB1-208ENST00000580019 GALNT11Q8NCW6 608 aa5.86□□□□□ -1.47
KPNB1-208ENST00000580019 GPBP1L1Q9HC44 474 aaPredicted RBP5.86□□□□□ -1.47
KPNB1-208ENST00000580019 PAK6Q9NQU5 681 aaPredicted RBP5.86□□□□□ -1.47
KPNB1-208ENST00000580019 NOD1Q9Y239 953 aa5.86□□□□□ -1.47
KPNB1-208ENST00000580019 PPME1Q9Y570 386 aa5.86□□□□□ -1.47
KPNB1-208ENST00000580019 KIAA1211Q6ZU35 1233 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms