RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 SUCLG2Q96I99 432 aa28.65■■■□□ 2.18
NDEL1-207ENST00000580012 PDE3AQ14432 1141 aa28.64■■■□□ 2.18
NDEL1-207ENST00000580012 CCDC152Q4G0S7 254 aa28.64■■■□□ 2.18
NDEL1-207ENST00000580012 FTSJ3Q8IY81 847 aaKnown RBP28.64■■■□□ 2.18
NDEL1-207ENST00000580012 PANK1Q8TE04 598 aa28.64■■■□□ 2.18
NDEL1-207ENST00000580012 BCS1LQ9Y276 419 aa28.64■■■□□ 2.18
NDEL1-207ENST00000580012 DDX46Q7L014 1031 aaKnown RBP28.63■■■□□ 2.17
NDEL1-207ENST00000580012 WWC3Q9ULE0 1092 aa28.63■■■□□ 2.17
NDEL1-207ENST00000580012 PRPF40BQ6NWY9 871 aaKnown RBP28.62■■■□□ 2.17
NDEL1-207ENST00000580012 MEIS3Q99687 375 aa28.62■■■□□ 2.17
NDEL1-207ENST00000580012 N4BP2Q86UW6 1770 aaPredicted RBP28.62■■■□□ 2.17
NDEL1-207ENST00000580012 RTL9Q8NET4 1388 aa28.62■■■□□ 2.17
NDEL1-207ENST00000580012 BBOX1O75936 387 aa28.61■■■□□ 2.17
NDEL1-207ENST00000580012 GPR162Q16538 588 aa28.61■■■□□ 2.17
NDEL1-207ENST00000580012 RABL6Q3YEC7 729 aaPredicted RBP28.61■■■□□ 2.17
NDEL1-207ENST00000580012 ZBTB7BO15156 539 aaPredicted RBP28.6■■■□□ 2.17
NDEL1-207ENST00000580012 GRAPQ13588 217 aa28.6■■■□□ 2.17
NDEL1-207ENST00000580012 GRAPLQ8TC17 118 aaPredicted RBP28.6■■■□□ 2.17
NDEL1-207ENST00000580012 DDX60Q8IY21 1712 aaKnown RBP28.6■■■□□ 2.17
NDEL1-207ENST00000580012 CHD4Q14839 1912 aa28.59■■■□□ 2.17
NDEL1-207ENST00000580012 GNAI3P08754 354 aa28.59■■■□□ 2.17
NDEL1-207ENST00000580012 ANKRD44Q8N8A2 993 aa28.59■■■□□ 2.17
NDEL1-207ENST00000580012 ZNF784Q8NCA9 323 aaPredicted RBP28.59■■■□□ 2.17
NDEL1-207ENST00000580012 GREM2Q9H772 168 aa28.59■■■□□ 2.17
NDEL1-207ENST00000580012 SEC31BQ9NQW1 1179 aa28.59■■■□□ 2.17
NDEL1-207ENST00000580012 COL11A2P13942 1736 aaPredicted RBP28.59■■■□□ 2.17
NDEL1-207ENST00000580012 GRIN3BO60391 1043 aa28.58■■■□□ 2.17
NDEL1-207ENST00000580012 UBTFL1P0CB47 393 aaPredicted RBP28.58■■■□□ 2.17
NDEL1-207ENST00000580012 RRP1P56182 461 aaKnown RBP28.58■■■□□ 2.17
NDEL1-207ENST00000580012 C20orf194Q5TEA3 1177 aa28.58■■■□□ 2.17
NDEL1-207ENST00000580012 LMBR1LQ6UX01 489 aa28.58■■■□□ 2.17
NDEL1-207ENST00000580012 CELF1Q92879 486 aaKnown RBP28.58■■■□□ 2.17
NDEL1-207ENST00000580012 HDAC5Q9UQL6 1122 aa28.58■■■□□ 2.17
NDEL1-207ENST00000580012 RPS8P62241 208 aaKnown RBP28.57■■■□□ 2.16
NDEL1-207ENST00000580012 CCDC85AQ96PX6 553 aaPredicted RBP28.57■■■□□ 2.16
NDEL1-207ENST00000580012 BICC1Q9H694 974 aaKnown RBP28.57■■■□□ 2.16
NDEL1-207ENST00000580012 ITPRIPQ8IWB1 547 aa28.56■■■□□ 2.16
NDEL1-207ENST00000580012 PELP1Q8IZL8 1130 aaKnown RBP28.56■■■□□ 2.16
NDEL1-207ENST00000580012 DLEC1Q9Y238 1755 aa28.55■■■□□ 2.16
NDEL1-207ENST00000580012 C21orf2O43822 256 aa28.55■■■□□ 2.16
NDEL1-207ENST00000580012 MVPQ14764 893 aaKnown RBP28.55■■■□□ 2.16
NDEL1-207ENST00000580012 FAM161AQ3B820 660 aa28.54■■■□□ 2.16
NDEL1-207ENST00000580012 TMC4Q7Z404 712 aa28.54■■■□□ 2.16
NDEL1-207ENST00000580012 SP8Q8IXZ3 490 aa28.54■■■□□ 2.16
NDEL1-207ENST00000580012 ATP6V0A2Q9Y487 856 aa28.54■■■□□ 2.16
NDEL1-207ENST00000580012 BRCA1P38398 1863 aaKnown RBP28.54■■■□□ 2.16
NDEL1-207ENST00000580012 LAMB2P55268 1798 aa28.54■■■□□ 2.16
NDEL1-207ENST00000580012 PPEF1O14829 653 aaPredicted RBP28.53■■■□□ 2.16
NDEL1-207ENST00000580012 ITGA6P23229 1130 aa28.53■■■□□ 2.16
NDEL1-207ENST00000580012 CC2D2BQ6DHV5 1058 aa28.53■■■□□ 2.16
NDEL1-207ENST00000580012 COG6Q9Y2V7 657 aa28.53■■■□□ 2.16
NDEL1-207ENST00000580012 LRRFIP2Q9Y608 721 aaKnown RBP28.53■■■□□ 2.16
NDEL1-207ENST00000580012 SOGA3Q5TF21 947 aa28.52■■■□□ 2.16
NDEL1-207ENST00000580012 CDC5LQ99459 802 aaKnown RBP28.52■■■□□ 2.16
NDEL1-207ENST00000580012 GNAI2P04899 355 aa28.51■■■□□ 2.15
NDEL1-207ENST00000580012 ANKRD18BA2A2Z9 1011 aa28.5■■■□□ 2.15
NDEL1-207ENST00000580012 IFIT5Q13325 482 aaKnown RBP28.5■■■□□ 2.15
NDEL1-207ENST00000580012 OLFM4Q6UX06 510 aa28.5■■■□□ 2.15
NDEL1-207ENST00000580012 ANKRD18AQ8IVF6 992 aa28.5■■■□□ 2.15
NDEL1-207ENST00000580012 ZNF219Q9P2Y4 722 aaPredicted RBP28.5■■■□□ 2.15
NDEL1-207ENST00000580012 DDX19BQ9UMR2 479 aa28.5■■■□□ 2.15
NDEL1-207ENST00000580012 SLX4Q8IY92 1834 aa28.5■■■□□ 2.15
NDEL1-207ENST00000580012 GRIPAP1Q4V328 841 aa28.49■■■□□ 2.15
NDEL1-207ENST00000580012 SLC51AQ86UW1 340 aa28.49■■■□□ 2.15
NDEL1-207ENST00000580012 BSDC1Q9NW68 430 aaPredicted RBP28.49■■■□□ 2.15
NDEL1-207ENST00000580012 GOLGB1Q14789 3259 aaKnown RBP28.48■■■□□ 2.15
NDEL1-207ENST00000580012 MTX1Q13505 466 aa28.48■■■□□ 2.15
NDEL1-207ENST00000580012 CCDC57Q2TAC2 916 aa28.48■■■□□ 2.15
NDEL1-207ENST00000580012 CCDC93Q567U6 631 aa28.48■■■□□ 2.15
NDEL1-207ENST00000580012 ARHGAP27Q6ZUM4 889 aa28.48■■■□□ 2.15
NDEL1-207ENST00000580012 SNED1Q8TER0 1413 aa28.48■■■□□ 2.15
NDEL1-207ENST00000580012 RTKN2Q8IZC4 609 aa28.47■■■□□ 2.15
NDEL1-207ENST00000580012 ZBTB40Q9NUA8 1239 aa28.47■■■□□ 2.15
NDEL1-207ENST00000580012 CHMP3Q9Y3E7 222 aa28.47■■■□□ 2.15
NDEL1-207ENST00000580012 SUPT16HQ9Y5B9 1047 aaKnown RBP28.47■■■□□ 2.15
NDEL1-207ENST00000580012 COL4A1P02462 1669 aa28.47■■■□□ 2.15
NDEL1-207ENST00000580012 RFX5P48382 616 aaPredicted RBP28.46■■■□□ 2.15
NDEL1-207ENST00000580012 NFKBIEO00221 500 aa28.45■■■□□ 2.14
NDEL1-207ENST00000580012 IGHMBP2P38935 993 aaKnown RBP28.45■■■□□ 2.14
NDEL1-207ENST00000580012 CHMP4BQ9H444 224 aaKnown RBP28.45■■■□□ 2.14
NDEL1-207ENST00000580012 LTBP3Q9NS15 1303 aa28.43■■■□□ 2.14
NDEL1-207ENST00000580012 ZNF594Q96JF6 807 aaPredicted RBP28.43■■■□□ 2.14
NDEL1-207ENST00000580012 TMX4Q9H1E5 349 aaPredicted RBP28.43■■■□□ 2.14
NDEL1-207ENST00000580012 MINPP1Q9UNW1 487 aa28.43■■■□□ 2.14
NDEL1-207ENST00000580012 PSMD1Q99460 953 aa28.42■■■□□ 2.14
NDEL1-207ENST00000580012 RTFDC1Q9BY42 306 aaPredicted RBP28.42■■■□□ 2.14
NDEL1-207ENST00000580012 ARFGEF1Q9Y6D6 1849 aa28.41■■■□□ 2.14
NDEL1-207ENST00000580012 ATP8B2P98198 1209 aa28.41■■■□□ 2.14
NDEL1-207ENST00000580012 FKBP4Q02790 459 aaKnown RBP eCLIP28.41■■■□□ 2.14
NDEL1-207ENST00000580012 MPHOSPH8Q99549 860 aa28.41■■■□□ 2.14
NDEL1-207ENST00000580012 PODXL2Q9NZ53 605 aa28.41■■■□□ 2.14
NDEL1-207ENST00000580012 PRELPP51888 382 aa28.4■■■□□ 2.14
NDEL1-207ENST00000580012 GPSM2P81274 684 aa28.4■■■□□ 2.14
NDEL1-207ENST00000580012 PTPN12Q05209 780 aaKnown RBP28.4■■■□□ 2.14
NDEL1-207ENST00000580012 MPNDQ8N594 471 aa28.4■■■□□ 2.14
NDEL1-207ENST00000580012 TAOK3Q9H2K8 898 aa28.4■■■□□ 2.14
NDEL1-207ENST00000580012 C1orf115Q9H7X2 142 aa28.4■■■□□ 2.14
NDEL1-207ENST00000580012 LDHAL6AQ6ZMR3 332 aa28.39■■■□□ 2.14
NDEL1-207ENST00000580012 RIPOR2Q9Y4F9 1068 aa28.39■■■□□ 2.14
NDEL1-207ENST00000580012 MYH3P11055 1940 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms