RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 PTPN12Q05209 780 aaKnown RBP10.7□□□□□ -0.7
PPP4R1-213ENST00000579609 NBPF14Q5TI25 921 aa10.7□□□□□ -0.7
PPP4R1-213ENST00000579609 NBPF10Q6P3W6 841 aaKnown RBP10.7□□□□□ -0.7
PPP4R1-213ENST00000579609 AACSQ86V21 672 aa10.7□□□□□ -0.7
PPP4R1-213ENST00000579609 NBPF15Q8N660 670 aa10.7□□□□□ -0.7
PPP4R1-213ENST00000579609 ISCA1Q9BUE6 129 aa10.7□□□□□ -0.7
PPP4R1-213ENST00000579609 LSG1Q9H089 658 aaKnown RBP10.7□□□□□ -0.7
PPP4R1-213ENST00000579609 ALDH8A1Q9H2A2 487 aaPredicted RBP10.7□□□□□ -0.7
PPP4R1-213ENST00000579609 DOT1LQ8TEK3 1739 aa10.7□□□□□ -0.7
PPP4R1-213ENST00000579609 A0A087WZG4 1122 aa10.69□□□□□ -0.7
PPP4R1-213ENST00000579609 ZNF579Q8NAF0 562 aaKnown RBP10.69□□□□□ -0.7
PPP4R1-213ENST00000579609 TNPO1Q92973 898 aaKnown RBP10.69□□□□□ -0.7
PPP4R1-213ENST00000579609 EAF2Q96CJ1 260 aaPredicted RBP10.69□□□□□ -0.7
PPP4R1-213ENST00000579609 AK7Q96M32 723 aa10.69□□□□□ -0.7
PPP4R1-213ENST00000579609 BTG4Q9NY30 223 aa10.69□□□□□ -0.7
PPP4R1-213ENST00000579609 HMG20BQ9P0W2 317 aa10.69□□□□□ -0.7
PPP4R1-213ENST00000579609 LAMB2P55268 1798 aa10.69□□□□□ -0.7
PPP4R1-213ENST00000579609 PALLDQ8WX93 1383 aa10.68□□□□□ -0.7
PPP4R1-213ENST00000579609 MED23Q9ULK4 1368 aa10.68□□□□□ -0.7
PPP4R1-213ENST00000579609 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.68□□□□□ -0.7
PPP4R1-213ENST00000579609 ERVV-1B6SEH8 477 aa10.68□□□□□ -0.7
PPP4R1-213ENST00000579609 PCCAP05165 728 aaPredicted RBP10.68□□□□□ -0.7
PPP4R1-213ENST00000579609 NEK4P51957 841 aa10.68□□□□□ -0.7
PPP4R1-213ENST00000579609 TCIRG1Q13488 830 aa10.68□□□□□ -0.7
PPP4R1-213ENST00000579609 LRRFIP1Q32MZ4 808 aaKnown RBP10.68□□□□□ -0.7
PPP4R1-213ENST00000579609 TSGA10IPQ3SY00 556 aa10.68□□□□□ -0.7
PPP4R1-213ENST00000579609 RNF20Q5VTR2 975 aa10.68□□□□□ -0.7
PPP4R1-213ENST00000579609 UNC5CLQ8IV45 518 aa10.68□□□□□ -0.7
PPP4R1-213ENST00000579609 ZSCAN31Q96LW9 406 aaPredicted RBP10.68□□□□□ -0.7
PPP4R1-213ENST00000579609 NUP98P52948 1817 aa10.68□□□□□ -0.7
PPP4R1-213ENST00000579609 CCDC171Q6TFL3 1326 aa10.67□□□□□ -0.7
PPP4R1-213ENST00000579609 EXOC5O00471 708 aa10.67□□□□□ -0.7
PPP4R1-213ENST00000579609 MAP3K13O43283 966 aa10.67□□□□□ -0.7
PPP4R1-213ENST00000579609 HSP90B1P14625 803 aaKnown RBP10.67□□□□□ -0.7
PPP4R1-213ENST00000579609 ZKSCAN1P17029 563 aaPredicted RBP10.67□□□□□ -0.7
PPP4R1-213ENST00000579609 PSMA5P28066 241 aa10.67□□□□□ -0.7
PPP4R1-213ENST00000579609 PSEN1P49768 467 aa10.67□□□□□ -0.7
PPP4R1-213ENST00000579609 FOXO4P98177 505 aa10.67□□□□□ -0.7
PPP4R1-213ENST00000579609 TNNI3KQ59H18 835 aa10.67□□□□□ -0.7
PPP4R1-213ENST00000579609 KIF6Q6ZMV9 814 aa10.67□□□□□ -0.7
PPP4R1-213ENST00000579609 UBE3BQ7Z3V4 1068 aa10.67□□□□□ -0.7
PPP4R1-213ENST00000579609 IFNL1Q8IU54 200 aa10.67□□□□□ -0.7
PPP4R1-213ENST00000579609 SH2B1Q9NRF2 756 aaPredicted RBP10.67□□□□□ -0.7
PPP4R1-213ENST00000579609 STRN4Q9NRL3 753 aa10.67□□□□□ -0.7
PPP4R1-213ENST00000579609 FPGT-TNNI3KV9GXZ4 949 aa10.67□□□□□ -0.7
PPP4R1-213ENST00000579609 SLIT2O94813 1529 aa10.67□□□□□ -0.7
PPP4R1-213ENST00000579609 ZNF609O15014 1411 aa10.67□□□□□ -0.7
PPP4R1-213ENST00000579609 LRP5O75197 1615 aa10.66□□□□□ -0.7
PPP4R1-213ENST00000579609 MAP3K15Q6ZN16 1313 aa10.66□□□□□ -0.7
PPP4R1-213ENST00000579609 TRAK2O60296 914 aa10.66□□□□□ -0.7
PPP4R1-213ENST00000579609 PRKCSHP14314 528 aaPredicted RBP10.66□□□□□ -0.7
PPP4R1-213ENST00000579609 KRT32Q14532 448 aa10.66□□□□□ -0.7
PPP4R1-213ENST00000579609 VPS53Q5VIR6 699 aa10.66□□□□□ -0.7
PPP4R1-213ENST00000579609 TSHZ3Q63HK5 1081 aa10.66□□□□□ -0.7
PPP4R1-213ENST00000579609 GIGYF2Q6Y7W6 1299 aaKnown RBP10.66□□□□□ -0.7
PPP4R1-213ENST00000579609 BARGINQ6ZT62 677 aa10.66□□□□□ -0.7
PPP4R1-213ENST00000579609 MAP4K1Q92918 833 aa10.66□□□□□ -0.7
PPP4R1-213ENST00000579609 TMX3Q96JJ7 454 aa10.66□□□□□ -0.7
PPP4R1-213ENST00000579609 TTC14Q96N46 770 aa10.66□□□□□ -0.7
PPP4R1-213ENST00000579609 HAUS7Q99871 368 aa10.66□□□□□ -0.7
PPP4R1-213ENST00000579609 PA2G4Q9UQ80 394 aaKnown RBP10.66□□□□□ -0.7
PPP4R1-213ENST00000579609 AKAP2Q9Y2D5 859 aa10.66□□□□□ -0.7
PPP4R1-213ENST00000579609 ARAP2Q8WZ64 1704 aa10.66□□□□□ -0.7
PPP4R1-213ENST00000579609 SH3TC1Q8TE82 1336 aa10.65□□□□□ -0.7
PPP4R1-213ENST00000579609 EYA2O00167 538 aa10.65□□□□□ -0.7
PPP4R1-213ENST00000579609 IL6STP40189 918 aaPredicted RBP10.65□□□□□ -0.7
PPP4R1-213ENST00000579609 NECTIN1Q15223 517 aa10.65□□□□□ -0.7
PPP4R1-213ENST00000579609 ANKRD1Q15327 319 aa10.65□□□□□ -0.7
PPP4R1-213ENST00000579609 KLHL40Q2TBA0 621 aa10.65□□□□□ -0.7
PPP4R1-213ENST00000579609 EPHA10Q5JZY3 1008 aa10.65□□□□□ -0.7
PPP4R1-213ENST00000579609 USPL1Q5W0Q7 1092 aa10.65□□□□□ -0.7
PPP4R1-213ENST00000579609 DDX54Q8TDD1 881 aaKnown RBP10.65□□□□□ -0.7
PPP4R1-213ENST00000579609 PIGBQ92521 554 aa10.65□□□□□ -0.7
PPP4R1-213ENST00000579609 CHMP4CQ96CF2 233 aa10.65□□□□□ -0.7
PPP4R1-213ENST00000579609 KIF12Q96FN5 646 aa10.65□□□□□ -0.7
PPP4R1-213ENST00000579609 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.65□□□□□ -0.7
PPP4R1-213ENST00000579609 SNX14Q9Y5W7 946 aa10.65□□□□□ -0.7
PPP4R1-213ENST00000579609 RPAP1Q9BWH6 1393 aaPredicted RBP10.65□□□□□ -0.71
PPP4R1-213ENST00000579609 COL5A3P25940 1745 aaPredicted RBP10.64□□□□□ -0.71
PPP4R1-213ENST00000579609 FSD2A1L4K1 749 aa10.64□□□□□ -0.71
PPP4R1-213ENST00000579609 BAG4O95429 457 aaKnown RBP10.64□□□□□ -0.71
PPP4R1-213ENST00000579609 CSF1RP07333 972 aa10.64□□□□□ -0.71
PPP4R1-213ENST00000579609 LMBR1LQ6UX01 489 aa10.64□□□□□ -0.71
PPP4R1-213ENST00000579609 ZBTB38Q8NAP3 1195 aaPredicted RBP10.64□□□□□ -0.71
PPP4R1-213ENST00000579609 ZSWIM6Q9HCJ5 1215 aa10.64□□□□□ -0.71
PPP4R1-213ENST00000579609 RYDENQ9NUL5 291 aaKnown RBP10.64□□□□□ -0.71
PPP4R1-213ENST00000579609 LIMCH1Q9UPQ0 1083 aa10.64□□□□□ -0.71
PPP4R1-213ENST00000579609 BCORQ6W2J9 1755 aa10.64□□□□□ -0.71
PPP4R1-213ENST00000579609 SPATA31A1Q5TZJ5 1347 aa10.63□□□□□ -0.71
PPP4R1-213ENST00000579609 WDR33Q9C0J8 1336 aaKnown RBP10.63□□□□□ -0.71
PPP4R1-213ENST00000579609 MYH7P12883 1935 aa10.63□□□□□ -0.71
PPP4R1-213ENST00000579609 BRD1O95696 1058 aa10.63□□□□□ -0.71
PPP4R1-213ENST00000579609 A1BGP04217 495 aa10.63□□□□□ -0.71
PPP4R1-213ENST00000579609 CWC27Q6UX04 472 aaKnown RBP10.63□□□□□ -0.71
PPP4R1-213ENST00000579609 TTLL7Q6ZT98 887 aa10.63□□□□□ -0.71
PPP4R1-213ENST00000579609 ATG9AQ7Z3C6 839 aa10.63□□□□□ -0.71
PPP4R1-213ENST00000579609 KBTBD3Q8NAB2 608 aa10.63□□□□□ -0.71
PPP4R1-213ENST00000579609 SMARCC1Q92922 1105 aaPredicted RBP10.63□□□□□ -0.71
PPP4R1-213ENST00000579609 ZNF512BQ96KM6 892 aaPredicted RBP10.63□□□□□ -0.71
PPP4R1-213ENST00000579609 FSD1Q9BTV5 496 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms