RNA–Protein interactions for RNA: ENST00000579339.5

LINC00271-205, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-205ENST00000579339 COL4A1P02462 1669 aa34.31■■■■□ 3.08
LINC00271-205ENST00000579339 ZNF541Q9H0D2 1346 aa34.31■■■■□ 3.08
LINC00271-205ENST00000579339 GRIPAP1Q4V328 841 aa34.31■■■■□ 3.08
LINC00271-205ENST00000579339 SP8Q8IXZ3 490 aa34.31■■■■□ 3.08
LINC00271-205ENST00000579339 NEURL1BA8MQ27 555 aa34.3■■■■□ 3.08
LINC00271-205ENST00000579339 VEGFAP15692 232 aaPredicted RBP34.3■■■■□ 3.08
LINC00271-205ENST00000579339 COL4A5P29400 1685 aa34.3■■■■□ 3.08
LINC00271-205ENST00000579339 POTECB2RU33 542 aa34.29■■■■□ 3.08
LINC00271-205ENST00000579339 DIEXFQ68CQ4 756 aaKnown RBP34.28■■■■□ 3.08
LINC00271-205ENST00000579339 DNAAF4Q8WXU2 420 aa34.28■■■■□ 3.08
LINC00271-205ENST00000579339 CCDC85AQ96PX6 553 aaPredicted RBP34.28■■■■□ 3.08
LINC00271-205ENST00000579339 WDR90Q96KV7 1748 aa34.27■■■■□ 3.08
LINC00271-205ENST00000579339 E9PSI1 815 aa34.27■■■■□ 3.08
LINC00271-205ENST00000579339 PDE8AO60658 829 aa34.27■■■■□ 3.08
LINC00271-205ENST00000579339 DPP8Q6V1X1 898 aaPredicted RBP34.27■■■■□ 3.08
LINC00271-205ENST00000579339 LARGE2Q8N3Y3 721 aa34.27■■■■□ 3.08
LINC00271-205ENST00000579339 RBM46Q8TBY0 533 aaKnown RBP34.27■■■■□ 3.08
LINC00271-205ENST00000579339 HSP90B1P14625 803 aaKnown RBP34.26■■■■□ 3.08
LINC00271-205ENST00000579339 MPNDQ8N594 471 aa34.26■■■■□ 3.08
LINC00271-205ENST00000579339 JDP2Q8WYK2 163 aa34.26■■■■□ 3.08
LINC00271-205ENST00000579339 SEC31BQ9NQW1 1179 aa34.26■■■■□ 3.08
LINC00271-205ENST00000579339 CACNA1FO60840 1977 aa34.25■■■■□ 3.07
LINC00271-205ENST00000579339 F6X3S4 739 aa34.25■■■■□ 3.07
LINC00271-205ENST00000579339 FZD9O00144 591 aa34.25■■■■□ 3.07
LINC00271-205ENST00000579339 PPIP5K2O43314 1243 aa34.25■■■■□ 3.07
LINC00271-205ENST00000579339 HSPA6P17066 643 aa34.25■■■■□ 3.07
LINC00271-205ENST00000579339 AOC3Q16853 763 aa34.25■■■■□ 3.07
LINC00271-205ENST00000579339 CDCA7LQ96GN5 454 aa34.25■■■■□ 3.07
LINC00271-205ENST00000579339 CDHR2Q9BYE9 1310 aa34.25■■■■□ 3.07
LINC00271-205ENST00000579339 MIER1Q8N108 512 aa34.24■■■■□ 3.07
LINC00271-205ENST00000579339 SLFN5Q08AF3 891 aa34.23■■■■□ 3.07
LINC00271-205ENST00000579339 CCDC152Q4G0S7 254 aa34.23■■■■□ 3.07
LINC00271-205ENST00000579339 TMC4Q7Z404 712 aa34.23■■■■□ 3.07
LINC00271-205ENST00000579339 UBE3BQ7Z3V4 1068 aa34.22■■■■□ 3.07
LINC00271-205ENST00000579339 RTFDC1Q9BY42 306 aaPredicted RBP34.22■■■■□ 3.07
LINC00271-205ENST00000579339 GCKRQ14397 625 aa34.21■■■■□ 3.07
LINC00271-205ENST00000579339 SUPT20HQ8NEM7 779 aa34.21■■■■□ 3.07
LINC00271-205ENST00000579339 CTSWP56202 376 aa34.2■■■■□ 3.07
LINC00271-205ENST00000579339 RPS8P62241 208 aaKnown RBP34.2■■■■□ 3.07
LINC00271-205ENST00000579339 LINS1Q8NG48 757 aa34.2■■■■□ 3.07
LINC00271-205ENST00000579339 LRRC37AA6NMS7 1700 aa34.19■■■■□ 3.06
LINC00271-205ENST00000579339 H7C1W4 665 aa34.19■■■■□ 3.06
LINC00271-205ENST00000579339 NIM1KQ8IY84 436 aa34.19■■■■□ 3.06
LINC00271-205ENST00000579339 DUOX1Q9NRD9 1551 aa34.19■■■■□ 3.06
LINC00271-205ENST00000579339 EIF6P56537 245 aaKnown RBP34.18■■■■□ 3.06
LINC00271-205ENST00000579339 L3MBTL3Q96JM7 780 aaPredicted RBP34.18■■■■□ 3.06
LINC00271-205ENST00000579339 GPSM2P81274 684 aa34.17■■■■□ 3.06
LINC00271-205ENST00000579339 FSTL1Q12841 308 aa34.17■■■■□ 3.06
LINC00271-205ENST00000579339 NSFL1CQ9UNZ2 370 aaKnown RBP34.17■■■■□ 3.06
LINC00271-205ENST00000579339 GJA3Q9Y6H8 435 aa34.17■■■■□ 3.06
LINC00271-205ENST00000579339 SMC1BQ8NDV3 1235 aa34.16■■■■□ 3.06
LINC00271-205ENST00000579339 CEP350Q5VT06 3117 aa34.15■■■■□ 3.06
LINC00271-205ENST00000579339 BEND3Q5T5X7 828 aa34.15■■■■□ 3.06
LINC00271-205ENST00000579339 TTLL11Q8NHH1 800 aa34.15■■■■□ 3.06
LINC00271-205ENST00000579339 VPS33BQ9H267 617 aa34.15■■■■□ 3.06
LINC00271-205ENST00000579339 CASP7P55210 303 aa34.14■■■■□ 3.06
LINC00271-205ENST00000579339 KIAA2012Q0VF49 1180 aa34.14■■■■□ 3.06
LINC00271-205ENST00000579339 GREM2Q9H772 168 aa34.14■■■■□ 3.06
LINC00271-205ENST00000579339 POTEIP0CG38 1075 aa34.13■■■■□ 3.05
LINC00271-205ENST00000579339 POTEJP0CG39 1038 aa34.13■■■■□ 3.05
LINC00271-205ENST00000579339 GPC2Q8N158 579 aa34.13■■■■□ 3.05
LINC00271-205ENST00000579339 MRPL50Q8N5N7 158 aaKnown RBP34.13■■■■□ 3.05
LINC00271-205ENST00000579339 IQCA1LA6NCM1 817 aa34.12■■■■□ 3.05
LINC00271-205ENST00000579339 TAF1DQ9H5J8 278 aaPredicted RBP34.12■■■■□ 3.05
LINC00271-205ENST00000579339 C6orf229H3BNL8 230 aa34.11■■■■□ 3.05
LINC00271-205ENST00000579339 SLC4A10Q6U841 1118 aa34.11■■■■□ 3.05
LINC00271-205ENST00000579339 ANKRD18AQ8IVF6 992 aa34.11■■■■□ 3.05
LINC00271-205ENST00000579339 GPR101Q96P66 508 aaPredicted RBP34.11■■■■□ 3.05
LINC00271-205ENST00000579339 BCL2L13Q9BXK5 485 aa34.11■■■■□ 3.05
LINC00271-205ENST00000579339 POLLQ9UGP5 575 aa34.11■■■■□ 3.05
LINC00271-205ENST00000579339 TRMT2AQ8IZ69 625 aaKnown RBP34.1■■■■□ 3.05
LINC00271-205ENST00000579339 SSH1Q8WYL5 1049 aa34.1■■■■□ 3.05
LINC00271-205ENST00000579339 HACL1Q9UJ83 578 aa34.1■■■■□ 3.05
LINC00271-205ENST00000579339 ZNRF3Q9ULT6 936 aa34.1■■■■□ 3.05
LINC00271-205ENST00000579339 PLA2G12BQ9BX93 195 aa34.09■■■■□ 3.05
LINC00271-205ENST00000579339 MYH3P11055 1940 aa34.08■■■■□ 3.05
LINC00271-205ENST00000579339 RIMBP2O15034 1052 aa34.08■■■■□ 3.05
LINC00271-205ENST00000579339 CDC5LQ99459 802 aaKnown RBP34.08■■■■□ 3.05
LINC00271-205ENST00000579339 SCN4AP35499 1836 aa34.07■■■■□ 3.04
LINC00271-205ENST00000579339 WASHC4Q2M389 1173 aa34.07■■■■□ 3.04
LINC00271-205ENST00000579339 TBC1D16Q8TBP0 767 aa34.07■■■■□ 3.04
LINC00271-205ENST00000579339 LTBP1Q14766 1721 aa34.07■■■■□ 3.04
LINC00271-205ENST00000579339 EPHX2P34913 555 aa34.06■■■■□ 3.04
LINC00271-205ENST00000579339 APLP1P51693 650 aa34.06■■■■□ 3.04
LINC00271-205ENST00000579339 CXCL9Q07325 125 aa34.06■■■■□ 3.04
LINC00271-205ENST00000579339 FAM161AQ3B820 660 aa34.06■■■■□ 3.04
LINC00271-205ENST00000579339 EAPPQ56P03 285 aaPredicted RBP34.06■■■■□ 3.04
LINC00271-205ENST00000579339 ANKIB1Q9P2G1 1089 aa34.06■■■■□ 3.04
LINC00271-205ENST00000579339 RTL9Q8NET4 1388 aa34.06■■■■□ 3.04
LINC00271-205ENST00000579339 YDJCA8MPS7 323 aa34.04■■■■□ 3.04
LINC00271-205ENST00000579339 RAD17O75943 681 aa34.04■■■■□ 3.04
LINC00271-205ENST00000579339 UFL1O94874 794 aa34.04■■■■□ 3.04
LINC00271-205ENST00000579339 HTRA3P83110 453 aa34.04■■■■□ 3.04
LINC00271-205ENST00000579339 DBNDD1Q9H9R9 158 aa34.04■■■■□ 3.04
LINC00271-205ENST00000579339 PODXL2Q9NZ53 605 aa34.04■■■■□ 3.04
LINC00271-205ENST00000579339 SCNN1DP51172 638 aa34.03■■■■□ 3.04
LINC00271-205ENST00000579339 CHADLQ6NUI6 762 aa34.03■■■■□ 3.04
LINC00271-205ENST00000579339 SRCIN1Q9C0H9 1055 aa34.03■■■■□ 3.04
LINC00271-205ENST00000579339 GGA1Q9UJY5 639 aa34.03■■■■□ 3.04
LINC00271-205ENST00000579339 GRM8O00222 908 aa34.02■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms