RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 MPNDQ8N594 471 aa13.93□□□□□ -0.18
CSNK1D-210ENST00000579308 GRAPLQ8TC17 118 aaPredicted RBP13.93□□□□□ -0.18
CSNK1D-210ENST00000579308 ADARB2Q9NS39 739 aaKnown RBP13.93□□□□□ -0.18
CSNK1D-210ENST00000579308 CHPF2Q9P2E5 772 aa13.93□□□□□ -0.18
CSNK1D-210ENST00000579308 PGAP2Q9UHJ9 254 aa13.93□□□□□ -0.18
CSNK1D-210ENST00000579308 TRAF5O00463 557 aa13.92□□□□□ -0.18
CSNK1D-210ENST00000579308 HOXB7P09629 217 aa13.92□□□□□ -0.18
CSNK1D-210ENST00000579308 DDX10Q13206 875 aaKnown RBP13.92□□□□□ -0.18
CSNK1D-210ENST00000579308 PLBD2Q8NHP8 589 aa13.92□□□□□ -0.18
CSNK1D-210ENST00000579308 AIDAQ96BJ3 306 aa13.92□□□□□ -0.18
CSNK1D-210ENST00000579308 ISCA1Q9BUE6 129 aa13.92□□□□□ -0.18
CSNK1D-210ENST00000579308 ABT1Q9ULW3 272 aaKnown RBP13.92□□□□□ -0.18
CSNK1D-210ENST00000579308 ADAMTS8Q9UP79 889 aa13.92□□□□□ -0.18
CSNK1D-210ENST00000579308 GMPSP49915 693 aaPredicted RBP13.91□□□□□ -0.18
CSNK1D-210ENST00000579308 MAP2K1Q02750 393 aaPredicted RBP13.91□□□□□ -0.18
CSNK1D-210ENST00000579308 ANKRD13DQ6ZTN6 518 aa13.91□□□□□ -0.18
CSNK1D-210ENST00000579308 LAS1LQ9Y4W2 734 aaKnown RBP13.91□□□□□ -0.18
CSNK1D-210ENST00000579308 YDJCA8MPS7 323 aa13.9□□□□□ -0.18
CSNK1D-210ENST00000579308 LBX1P52954 281 aa13.9□□□□□ -0.18
CSNK1D-210ENST00000579308 HIRAP54198 1017 aaPredicted RBP13.9□□□□□ -0.18
CSNK1D-210ENST00000579308 TRIM28Q13263 835 aaKnown RBP13.9□□□□□ -0.18
CSNK1D-210ENST00000579308 SF3B3Q15393 1217 aaKnown RBP13.9□□□□□ -0.18
CSNK1D-210ENST00000579308 HDGFL1Q5TGJ6 251 aa13.9□□□□□ -0.18
CSNK1D-210ENST00000579308 CIAPIN1Q6FI81 312 aa13.9□□□□□ -0.18
CSNK1D-210ENST00000579308 TMC4Q7Z404 712 aa13.9□□□□□ -0.18
CSNK1D-210ENST00000579308 CFAP44Q96MT7 982 aa13.9□□□□□ -0.18
CSNK1D-210ENST00000579308 TLL2Q9Y6L7 1015 aa13.9□□□□□ -0.18
CSNK1D-210ENST00000579308 RAD17O75943 681 aa13.89□□□□□ -0.19
CSNK1D-210ENST00000579308 ZNF853P0CG23 659 aa13.89□□□□□ -0.19
CSNK1D-210ENST00000579308 HSPA8P11142 646 aaKnown RBP13.89□□□□□ -0.19
CSNK1D-210ENST00000579308 HOXD11P31277 338 aaPredicted RBP13.89□□□□□ -0.19
CSNK1D-210ENST00000579308 TNIP1Q15025 636 aa13.89□□□□□ -0.19
CSNK1D-210ENST00000579308 ZC3H15Q8WU90 426 aaKnown RBP13.89□□□□□ -0.19
CSNK1D-210ENST00000579308 FAM89AQ96GI7 184 aa13.89□□□□□ -0.19
CSNK1D-210ENST00000579308 CAPNS2Q96L46 248 aa13.89□□□□□ -0.19
CSNK1D-210ENST00000579308 DBF4Q9UBU7 674 aaPredicted RBP13.89□□□□□ -0.19
CSNK1D-210ENST00000579308 CDHR2Q9BYE9 1310 aa13.89□□□□□ -0.19
CSNK1D-210ENST00000579308 ATP5J2-PTCD1G3V325 749 aa13.88□□□□□ -0.19
CSNK1D-210ENST00000579308 WDR43Q15061 677 aaKnown RBP eCLIP13.88□□□□□ -0.19
CSNK1D-210ENST00000579308 DUSP27Q5VZP5 1158 aa13.88□□□□□ -0.19
CSNK1D-210ENST00000579308 CELF1Q92879 486 aaKnown RBP13.88□□□□□ -0.19
CSNK1D-210ENST00000579308 ZNF428Q96B54 188 aa13.88□□□□□ -0.19
CSNK1D-210ENST00000579308 GPR101Q96P66 508 aaPredicted RBP13.88□□□□□ -0.19
CSNK1D-210ENST00000579308 HYPKQ9NX55 129 aa13.88□□□□□ -0.19
CSNK1D-210ENST00000579308 ECE1P42892 770 aa13.87□□□□□ -0.19
CSNK1D-210ENST00000579308 CYP4F22Q6NT55 531 aa13.87□□□□□ -0.19
CSNK1D-210ENST00000579308 SAPCD2Q86UD0 394 aa13.87□□□□□ -0.19
CSNK1D-210ENST00000579308 TRPM4Q8TD43 1214 aa13.87□□□□□ -0.19
CSNK1D-210ENST00000579308 GLIS2Q9BZE0 524 aaPredicted RBP13.87□□□□□ -0.19
CSNK1D-210ENST00000579308 MBIPQ9NS73 344 aa13.87□□□□□ -0.19
CSNK1D-210ENST00000579308 POLLQ9UGP5 575 aa13.87□□□□□ -0.19
CSNK1D-210ENST00000579308 CNOT7Q9UIV1 285 aaKnown RBP13.87□□□□□ -0.19
CSNK1D-210ENST00000579308 SHTN1A0MZ66 631 aa13.86□□□□□ -0.19
CSNK1D-210ENST00000579308 HHIPL1Q96JK4 782 aa13.86□□□□□ -0.19
CSNK1D-210ENST00000579308 BCL2L13Q9BXK5 485 aa13.86□□□□□ -0.19
CSNK1D-210ENST00000579308 CELF2O95319 508 aaKnown RBP13.85□□□□□ -0.19
CSNK1D-210ENST00000579308 MAP2K2P36507 400 aa13.85□□□□□ -0.19
CSNK1D-210ENST00000579308 GPSM2P81274 684 aa13.85□□□□□ -0.19
CSNK1D-210ENST00000579308 WASHC4Q2M389 1173 aa13.85□□□□□ -0.19
CSNK1D-210ENST00000579308 DPF2Q92785 391 aa13.85□□□□□ -0.19
CSNK1D-210ENST00000579308 NSFL1CQ9UNZ2 370 aaKnown RBP13.85□□□□□ -0.19
CSNK1D-210ENST00000579308 DUOX1Q9NRD9 1551 aa13.84□□□□□ -0.19
CSNK1D-210ENST00000579308 H7C1D1 291 aa13.84□□□□□ -0.19
CSNK1D-210ENST00000579308 PSMD14O00487 310 aa13.84□□□□□ -0.19
CSNK1D-210ENST00000579308 IRS4O14654 1257 aaPredicted RBP13.84□□□□□ -0.19
CSNK1D-210ENST00000579308 RPS8P62241 208 aaKnown RBP13.84□□□□□ -0.19
CSNK1D-210ENST00000579308 CDC37L1Q7L3B6 337 aa13.84□□□□□ -0.19
CSNK1D-210ENST00000579308 MICALL2Q8IY33 904 aa13.84□□□□□ -0.19
CSNK1D-210ENST00000579308 ZBTB38Q8NAP3 1195 aaPredicted RBP13.84□□□□□ -0.19
CSNK1D-210ENST00000579308 PRKRIP1Q9H875 184 aaPredicted RBP13.84□□□□□ -0.19
CSNK1D-210ENST00000579308 KCNQ5Q9NR82 932 aa13.84□□□□□ -0.19
CSNK1D-210ENST00000579308 ZBTB12Q9Y330 459 aaPredicted RBP13.84□□□□□ -0.19
CSNK1D-210ENST00000579308 AOC2O75106 756 aa13.83□□□□□ -0.2
CSNK1D-210ENST00000579308 RTL5Q5HYW3 569 aaPredicted RBP13.83□□□□□ -0.2
CSNK1D-210ENST00000579308 PPP4R3CPQ6ZMV5 832 aa13.83□□□□□ -0.2
CSNK1D-210ENST00000579308 TBC1D16Q8TBP0 767 aa13.83□□□□□ -0.2
CSNK1D-210ENST00000579308 PHAXQ9H814 394 aaKnown RBP13.83□□□□□ -0.2
CSNK1D-210ENST00000579308 DBNDD1Q9H9R9 158 aa13.83□□□□□ -0.2
CSNK1D-210ENST00000579308 IFT57Q9NWB7 429 aa13.83□□□□□ -0.2
CSNK1D-210ENST00000579308 ANKRD36CQ5JPF3 1778 aa13.83□□□□□ -0.2
CSNK1D-210ENST00000579308 APAF1O14727 1248 aa13.82□□□□□ -0.2
CSNK1D-210ENST00000579308 RIMBP2O15034 1052 aa13.82□□□□□ -0.2
CSNK1D-210ENST00000579308 PAXIP1Q6ZW49 1069 aaPredicted RBP13.82□□□□□ -0.2
CSNK1D-210ENST00000579308 SAMD7Q7Z3H4 446 aa13.82□□□□□ -0.2
CSNK1D-210ENST00000579308 RIC3Q7Z5B4 369 aa13.82□□□□□ -0.2
CSNK1D-210ENST00000579308 USP48Q86UV5 1035 aa13.82□□□□□ -0.2
CSNK1D-210ENST00000579308 PODXL2Q9NZ53 605 aa13.82□□□□□ -0.2
CSNK1D-210ENST00000579308 RTL9Q8NET4 1388 aa13.82□□□□□ -0.2
CSNK1D-210ENST00000579308 C6orf229H3BNL8 230 aa13.81□□□□□ -0.2
CSNK1D-210ENST00000579308 EGFRP00533 1210 aa13.81□□□□□ -0.2
CSNK1D-210ENST00000579308 VIL1P09327 827 aaKnown RBP13.81□□□□□ -0.2
CSNK1D-210ENST00000579308 RPS12P25398 132 aaKnown RBP13.81□□□□□ -0.2
CSNK1D-210ENST00000579308 GNAI1P63096 354 aa13.81□□□□□ -0.2
CSNK1D-210ENST00000579308 GRM1Q13255 1194 aa13.81□□□□□ -0.2
CSNK1D-210ENST00000579308 DOK7Q18PE1 504 aa13.81□□□□□ -0.2
CSNK1D-210ENST00000579308 DLK2Q6UY11 383 aa13.81□□□□□ -0.2
CSNK1D-210ENST00000579308 C8orf58Q8NAV2 365 aa13.81□□□□□ -0.2
CSNK1D-210ENST00000579308 ABHD8Q96I13 439 aa13.81□□□□□ -0.2
CSNK1D-210ENST00000579308 EYA3Q99504 573 aa13.81□□□□□ -0.2
CSNK1D-210ENST00000579308 BEGAINQ9BUH8 593 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms