RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 HMOX1P09601 288 aa9.69□□□□□ -0.86
CDK5RAP3-209ENST00000578663 HOXA10P31260 410 aaPredicted RBP9.69□□□□□ -0.86
CDK5RAP3-209ENST00000578663 USP48Q86UV5 1035 aa9.69□□□□□ -0.86
CDK5RAP3-209ENST00000578663 RASAL3Q86YV0 1011 aa9.69□□□□□ -0.86
CDK5RAP3-209ENST00000578663 REM2Q8IYK8 340 aaPredicted RBP9.69□□□□□ -0.86
CDK5RAP3-209ENST00000578663 LARGE2Q8N3Y3 721 aa9.69□□□□□ -0.86
CDK5RAP3-209ENST00000578663 GAS2L2Q8NHY3 880 aa9.69□□□□□ -0.86
CDK5RAP3-209ENST00000578663 VPS33BQ9H267 617 aa9.69□□□□□ -0.86
CDK5RAP3-209ENST00000578663 NIP7Q9Y221 180 aaKnown RBP eCLIP9.69□□□□□ -0.86
CDK5RAP3-209ENST00000578663 ALPK3Q96L96 1907 aa9.68□□□□□ -0.86
CDK5RAP3-209ENST00000578663 GNAT3A8MTJ3 354 aa9.68□□□□□ -0.86
CDK5RAP3-209ENST00000578663 FKTNO75072 461 aa9.68□□□□□ -0.86
CDK5RAP3-209ENST00000578663 GPR153Q6NV75 609 aa9.68□□□□□ -0.86
CDK5RAP3-209ENST00000578663 ANKRD13DQ6ZTN6 518 aa9.68□□□□□ -0.86
CDK5RAP3-209ENST00000578663 OTOP1Q7RTM1 612 aa9.68□□□□□ -0.86
CDK5RAP3-209ENST00000578663 NIM1KQ8IY84 436 aa9.68□□□□□ -0.86
CDK5RAP3-209ENST00000578663 IL17REQ8NFR9 667 aa9.68□□□□□ -0.86
CDK5RAP3-209ENST00000578663 TRPM4Q8TD43 1214 aa9.68□□□□□ -0.86
CDK5RAP3-209ENST00000578663 TIMELESSQ9UNS1 1208 aa9.68□□□□□ -0.86
CDK5RAP3-209ENST00000578663 ABCC12Q96J65 1359 aa9.67□□□□□ -0.86
CDK5RAP3-209ENST00000578663 POLR3GLQ9BT43 218 aa9.67□□□□□ -0.86
CDK5RAP3-209ENST00000578663 NYXQ9GZU5 481 aa9.67□□□□□ -0.86
CDK5RAP3-209ENST00000578663 KNSTRNQ9Y448 316 aa9.67□□□□□ -0.86
CDK5RAP3-209ENST00000578663 TRIM17Q9Y577 477 aa9.67□□□□□ -0.86
CDK5RAP3-209ENST00000578663 NCOR1O75376 2440 aa9.66□□□□□ -0.86
CDK5RAP3-209ENST00000578663 NPC1L1Q9UHC9 1359 aa9.66□□□□□ -0.86
CDK5RAP3-209ENST00000578663 SYNGAP1Q96PV0 1343 aa9.66□□□□□ -0.86
CDK5RAP3-209ENST00000578663 DIAPH1O60610 1272 aaKnown RBP9.66□□□□□ -0.86
CDK5RAP3-209ENST00000578663 AMER1Q5JTC6 1135 aaPredicted RBP9.66□□□□□ -0.86
CDK5RAP3-209ENST00000578663 C2orf69Q8N8R5 385 aa9.66□□□□□ -0.86
CDK5RAP3-209ENST00000578663 CRAMP1Q96RY5 1269 aa9.66□□□□□ -0.86
CDK5RAP3-209ENST00000578663 COL3A1P02461 1466 aaPredicted RBP9.66□□□□□ -0.86
CDK5RAP3-209ENST00000578663 LAMB1P07942 1786 aa9.65□□□□□ -0.86
CDK5RAP3-209ENST00000578663 PPIP5K2O43314 1243 aa9.65□□□□□ -0.86
CDK5RAP3-209ENST00000578663 SNRPA1P09661 255 aaKnown RBP9.65□□□□□ -0.86
CDK5RAP3-209ENST00000578663 GTF2E1P29083 439 aaPredicted RBP9.65□□□□□ -0.86
CDK5RAP3-209ENST00000578663 RPGRQ92834 1020 aaKnown RBP9.65□□□□□ -0.86
CDK5RAP3-209ENST00000578663 CFHR5Q9BXR6 569 aa9.65□□□□□ -0.86
CDK5RAP3-209ENST00000578663 ZNRF3Q9ULT6 936 aa9.65□□□□□ -0.86
CDK5RAP3-209ENST00000578663 PTPN22Q9Y2R2 807 aa9.65□□□□□ -0.86
CDK5RAP3-209ENST00000578663 USP16Q9Y5T5 823 aa9.65□□□□□ -0.86
CDK5RAP3-209ENST00000578663 BDP1A6H8Y1 2624 aa9.65□□□□□ -0.87
CDK5RAP3-209ENST00000578663 ZNF646O15015 1829 aaPredicted RBP9.64□□□□□ -0.87
CDK5RAP3-209ENST00000578663 SHTN1A0MZ66 631 aa9.64□□□□□ -0.87
CDK5RAP3-209ENST00000578663 WTIPA6NIX2 430 aaPredicted RBP9.64□□□□□ -0.87
CDK5RAP3-209ENST00000578663 BTBD11A6QL63 1104 aa9.64□□□□□ -0.87
CDK5RAP3-209ENST00000578663 PPEF1O14829 653 aaPredicted RBP9.64□□□□□ -0.87
CDK5RAP3-209ENST00000578663 GMPSP49915 693 aaPredicted RBP9.64□□□□□ -0.87
CDK5RAP3-209ENST00000578663 CXCL9Q07325 125 aa9.64□□□□□ -0.87
CDK5RAP3-209ENST00000578663 SUPT20HQ8NEM7 779 aa9.64□□□□□ -0.87
CDK5RAP3-209ENST00000578663 ZNF333Q96JL9 665 aa9.64□□□□□ -0.87
CDK5RAP3-209ENST00000578663 NBPF26B4DH59 902 aa9.63□□□□□ -0.87
CDK5RAP3-209ENST00000578663 ERVV-1B6SEH8 477 aa9.63□□□□□ -0.87
CDK5RAP3-209ENST00000578663 TM4SF4P48230 202 aa9.63□□□□□ -0.87
CDK5RAP3-209ENST00000578663 PIP4K2AP48426 406 aaPredicted RBP9.63□□□□□ -0.87
CDK5RAP3-209ENST00000578663 NBPF10Q6P3W6 841 aaKnown RBP9.63□□□□□ -0.87
CDK5RAP3-209ENST00000578663 DPF3Q92784 378 aa9.63□□□□□ -0.87
CDK5RAP3-209ENST00000578663 TMEM106CQ9BVX2 250 aa9.63□□□□□ -0.87
CDK5RAP3-209ENST00000578663 RTFDC1Q9BY42 306 aaPredicted RBP9.63□□□□□ -0.87
CDK5RAP3-209ENST00000578663 ZNF609O15014 1411 aa9.63□□□□□ -0.87
CDK5RAP3-209ENST00000578663 NUP98P52948 1817 aa9.62□□□□□ -0.87
CDK5RAP3-209ENST00000578663 FAM177BA6PVY3 158 aa9.62□□□□□ -0.87
CDK5RAP3-209ENST00000578663 ADM5C9JUS6 153 aa9.62□□□□□ -0.87
CDK5RAP3-209ENST00000578663 ZBTB7BO15156 539 aaPredicted RBP9.62□□□□□ -0.87
CDK5RAP3-209ENST00000578663 KCNQ3O43525 872 aa9.62□□□□□ -0.87
CDK5RAP3-209ENST00000578663 EIF4G2P78344 907 aaKnown RBP eCLIP9.62□□□□□ -0.87
CDK5RAP3-209ENST00000578663 CAP1Q01518 475 aa9.62□□□□□ -0.87
CDK5RAP3-209ENST00000578663 MAP3K12Q12852 859 aa9.62□□□□□ -0.87
CDK5RAP3-209ENST00000578663 TNIP1Q15025 636 aa9.62□□□□□ -0.87
CDK5RAP3-209ENST00000578663 HLFQ16534 295 aa9.62□□□□□ -0.87
CDK5RAP3-209ENST00000578663 AOC3Q16853 763 aa9.62□□□□□ -0.87
CDK5RAP3-209ENST00000578663 SLC51AQ86UW1 340 aa9.62□□□□□ -0.87
CDK5RAP3-209ENST00000578663 RBM17Q96I25 401 aaKnown RBP9.62□□□□□ -0.87
CDK5RAP3-209ENST00000578663 TMX4Q9H1E5 349 aaPredicted RBP9.62□□□□□ -0.87
CDK5RAP3-209ENST00000578663 ATP6V0A2Q9Y487 856 aa9.62□□□□□ -0.87
CDK5RAP3-209ENST00000578663 TAF1P21675 1872 aa9.62□□□□□ -0.87
CDK5RAP3-209ENST00000578663 RPTORQ8N122 1335 aa9.61□□□□□ -0.87
CDK5RAP3-209ENST00000578663 KIAA2012Q0VF49 1180 aa9.61□□□□□ -0.87
CDK5RAP3-209ENST00000578663 NUTM1Q86Y26 1132 aa9.61□□□□□ -0.87
CDK5RAP3-209ENST00000578663 BCL2L13Q9BXK5 485 aa9.61□□□□□ -0.87
CDK5RAP3-209ENST00000578663 MAP3K15Q6ZN16 1313 aa9.6□□□□□ -0.87
CDK5RAP3-209ENST00000578663 TMEM265A0A087WTH1 108 aa9.6□□□□□ -0.87
CDK5RAP3-209ENST00000578663 PRAMEF22A3QJZ6 481 aa9.6□□□□□ -0.87
CDK5RAP3-209ENST00000578663 KRT26Q7Z3Y9 468 aa9.6□□□□□ -0.87
CDK5RAP3-209ENST00000578663 DPF2Q92785 391 aa9.6□□□□□ -0.87
CDK5RAP3-209ENST00000578663 SHISA4Q96DD7 197 aa9.6□□□□□ -0.87
CDK5RAP3-209ENST00000578663 UBN2Q6ZU65 1347 aa9.59□□□□□ -0.87
CDK5RAP3-209ENST00000578663 ZSWIM8A7E2V4 1837 aa9.59□□□□□ -0.87
CDK5RAP3-209ENST00000578663 H7C1D1 291 aa9.59□□□□□ -0.87
CDK5RAP3-209ENST00000578663 NTSR2O95665 410 aa9.59□□□□□ -0.87
CDK5RAP3-209ENST00000578663 GUCD1Q96NT3 240 aa9.59□□□□□ -0.87
CDK5RAP3-209ENST00000578663 STAP2Q9UGK3 403 aa9.59□□□□□ -0.87
CDK5RAP3-209ENST00000578663 CNOT7Q9UIV1 285 aaKnown RBP9.59□□□□□ -0.87
CDK5RAP3-209ENST00000578663 LRRC37AA6NMS7 1700 aa9.59□□□□□ -0.87
CDK5RAP3-209ENST00000578663 MUC6Q6W4X9 2439 aa9.58□□□□□ -0.88
CDK5RAP3-209ENST00000578663 TNFRSF10AO00220 468 aa9.58□□□□□ -0.88
CDK5RAP3-209ENST00000578663 U2SURPO15042 1029 aaKnown RBP9.58□□□□□ -0.88
CDK5RAP3-209ENST00000578663 EGFRP00533 1210 aa9.58□□□□□ -0.88
CDK5RAP3-209ENST00000578663 HSPA5P11021 654 aaKnown RBP9.58□□□□□ -0.88
CDK5RAP3-209ENST00000578663 PARP10Q53GL7 1025 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms