RNA–Protein interactions for RNA: ENST00000578537.1

CTC1-205, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-205ENST00000578537 C10orf71Q711Q0 1435 aa16.24■□□□□ 0.19
CTC1-205ENST00000578537 PPP1R42Q7Z4L9 355 aa16.23■□□□□ 0.19
CTC1-205ENST00000578537 CCDC85AQ96PX6 553 aaPredicted RBP16.23■□□□□ 0.19
CTC1-205ENST00000578537 PLA2G12BQ9BX93 195 aa16.23■□□□□ 0.19
CTC1-205ENST00000578537 IGHDP01880 384 aa16.22■□□□□ 0.19
CTC1-205ENST00000578537 FAM161AQ3B820 660 aa16.22■□□□□ 0.19
CTC1-205ENST00000578537 B4GALNT3Q6L9W6 998 aa16.22■□□□□ 0.19
CTC1-205ENST00000578537 SLC51AQ86UW1 340 aa16.22■□□□□ 0.19
CTC1-205ENST00000578537 PELP1Q8IZL8 1130 aaKnown RBP16.22■□□□□ 0.19
CTC1-205ENST00000578537 KLHL34Q8N239 644 aa16.22■□□□□ 0.19
CTC1-205ENST00000578537 CNBD1Q8NA66 436 aa16.22■□□□□ 0.19
CTC1-205ENST00000578537 SLC16A10Q8TF71 515 aa16.22■□□□□ 0.19
CTC1-205ENST00000578537 LRRC37AA6NMS7 1700 aa16.22■□□□□ 0.19
CTC1-205ENST00000578537 CTSWP56202 376 aa16.21■□□□□ 0.19
CTC1-205ENST00000578537 MTX1Q13505 466 aa16.21■□□□□ 0.19
CTC1-205ENST00000578537 LMBR1LQ6UX01 489 aa16.21■□□□□ 0.19
CTC1-205ENST00000578537 PDE8AO60658 829 aa16.2■□□□□ 0.18
CTC1-205ENST00000578537 POLD1P28340 1107 aa16.2■□□□□ 0.18
CTC1-205ENST00000578537 RFX5P48382 616 aaPredicted RBP16.2■□□□□ 0.18
CTC1-205ENST00000578537 POLA2Q14181 598 aa16.2■□□□□ 0.18
CTC1-205ENST00000578537 SLC10A5Q5PT55 438 aa16.2■□□□□ 0.18
CTC1-205ENST00000578537 TTLL11Q8NHH1 800 aa16.2■□□□□ 0.18
CTC1-205ENST00000578537 KLHDC4Q8TBB5 520 aa16.2■□□□□ 0.18
CTC1-205ENST00000578537 NYXQ9GZU5 481 aa16.2■□□□□ 0.18
CTC1-205ENST00000578537 CSF1RP07333 972 aa16.19■□□□□ 0.18
CTC1-205ENST00000578537 ATP8B2P98198 1209 aa16.19■□□□□ 0.18
CTC1-205ENST00000578537 NLGN2Q8NFZ4 835 aa16.19■□□□□ 0.18
CTC1-205ENST00000578537 GREM2Q9H772 168 aa16.19■□□□□ 0.18
CTC1-205ENST00000578537 PA2G4Q9UQ80 394 aaKnown RBP16.19■□□□□ 0.18
CTC1-205ENST00000578537 PARP3Q9Y6F1 533 aa16.19■□□□□ 0.18
CTC1-205ENST00000578537 SLX4Q8IY92 1834 aa16.19■□□□□ 0.18
CTC1-205ENST00000578537 KDM2BQ8NHM5 1336 aa16.19■□□□□ 0.18
CTC1-205ENST00000578537 ERICH6BQ5W0A0 696 aa16.18■□□□□ 0.18
CTC1-205ENST00000578537 TPTE2Q6XPS3 522 aa16.18■□□□□ 0.18
CTC1-205ENST00000578537 SSH3Q8TE77 659 aa16.18■□□□□ 0.18
CTC1-205ENST00000578537 SEC31BQ9NQW1 1179 aa16.18■□□□□ 0.18
CTC1-205ENST00000578537 PPP4R2Q9NY27 417 aa16.18■□□□□ 0.18
CTC1-205ENST00000578537 LTBP1Q14766 1721 aa16.18■□□□□ 0.18
CTC1-205ENST00000578537 SRGAP3O43295 1099 aa16.17■□□□□ 0.18
CTC1-205ENST00000578537 ZNF594Q96JF6 807 aaPredicted RBP16.17■□□□□ 0.18
CTC1-205ENST00000578537 CHMP4BQ9H444 224 aaKnown RBP16.17■□□□□ 0.18
CTC1-205ENST00000578537 RTL9Q8NET4 1388 aa16.16■□□□□ 0.18
CTC1-205ENST00000578537 AAMPQ13685 434 aa16.16■□□□□ 0.18
CTC1-205ENST00000578537 RPAP2Q8IXW5 612 aaPredicted RBP16.16■□□□□ 0.18
CTC1-205ENST00000578537 CHMP3Q9Y3E7 222 aa16.16■□□□□ 0.18
CTC1-205ENST00000578537 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.16■□□□□ 0.18
CTC1-205ENST00000578537 ARAP2Q8WZ64 1704 aa16.16■□□□□ 0.18
CTC1-205ENST00000578537 GRIN3BO60391 1043 aa16.15■□□□□ 0.18
CTC1-205ENST00000578537 YBX3P16989 372 aaKnown RBP eCLIP16.15■□□□□ 0.18
CTC1-205ENST00000578537 GTF2E1P29083 439 aaPredicted RBP16.15■□□□□ 0.18
CTC1-205ENST00000578537 ST5P78524 1137 aa16.15■□□□□ 0.18
CTC1-205ENST00000578537 HDAC1Q13547 482 aaPredicted RBP16.15■□□□□ 0.18
CTC1-205ENST00000578537 SF3B3Q15393 1217 aaKnown RBP16.15■□□□□ 0.18
CTC1-205ENST00000578537 SKAP1Q86WV1 359 aa16.15■□□□□ 0.18
CTC1-205ENST00000578537 KLRG2A4D1S0 409 aaPredicted RBP16.14■□□□□ 0.17
CTC1-205ENST00000578537 NPHP1O15259 732 aa16.14■□□□□ 0.17
CTC1-205ENST00000578537 ITGA6P23229 1130 aa16.14■□□□□ 0.17
CTC1-205ENST00000578537 PTPN12Q05209 780 aaKnown RBP16.14■□□□□ 0.17
CTC1-205ENST00000578537 CRY2Q49AN0 593 aa16.14■□□□□ 0.17
CTC1-205ENST00000578537 PUS3Q9BZE2 481 aaKnown RBP16.14■□□□□ 0.17
CTC1-205ENST00000578537 EXOC6BQ9Y2D4 811 aa16.14■□□□□ 0.17
CTC1-205ENST00000578537 CELF1Q92879 486 aaKnown RBP16.13■□□□□ 0.17
CTC1-205ENST00000578537 CCDC136Q96JN2 1154 aa16.13■□□□□ 0.17
CTC1-205ENST00000578537 CHRNA5P30532 468 aa16.12■□□□□ 0.17
CTC1-205ENST00000578537 BRIP1Q9BX63 1249 aa16.12■□□□□ 0.17
CTC1-205ENST00000578537 SIL1Q9H173 461 aa16.12■□□□□ 0.17
CTC1-205ENST00000578537 CCDC152Q4G0S7 254 aa16.11■□□□□ 0.17
CTC1-205ENST00000578537 LRRC24Q50LG9 513 aa16.11■□□□□ 0.17
CTC1-205ENST00000578537 SMC5Q8IY18 1101 aa16.11■□□□□ 0.17
CTC1-205ENST00000578537 NLRP3Q96P20 1036 aa16.11■□□□□ 0.17
CTC1-205ENST00000578537 DCTPP1Q9H773 170 aa16.11■□□□□ 0.17
CTC1-205ENST00000578537 COPRSQ9NQ92 184 aa16.11■□□□□ 0.17
CTC1-205ENST00000578537 DUOX1Q9NRD9 1551 aa16.11■□□□□ 0.17
CTC1-205ENST00000578537 ATG9AQ7Z3C6 839 aa16.1■□□□□ 0.17
CTC1-205ENST00000578537 HDAC5Q9UQL6 1122 aa16.1■□□□□ 0.17
CTC1-205ENST00000578537 ARFGEF1Q9Y6D6 1849 aa16.1■□□□□ 0.17
CTC1-205ENST00000578537 APBB1O00213 710 aa16.09■□□□□ 0.17
CTC1-205ENST00000578537 SMARCA5O60264 1052 aaPredicted RBP16.09■□□□□ 0.17
CTC1-205ENST00000578537 SASH1O94885 1247 aa16.09■□□□□ 0.17
CTC1-205ENST00000578537 SRGNP10124 158 aa16.09■□□□□ 0.17
CTC1-205ENST00000578537 HSPA6P17066 643 aa16.09■□□□□ 0.17
CTC1-205ENST00000578537 IFIT5Q13325 482 aaKnown RBP16.09■□□□□ 0.17
CTC1-205ENST00000578537 NOP58Q9Y2X3 529 aaKnown RBP16.09■□□□□ 0.17
CTC1-205ENST00000578537 ANKRD18BA2A2Z9 1011 aa16.08■□□□□ 0.16
CTC1-205ENST00000578537 HMMRO75330 724 aa16.08■□□□□ 0.16
CTC1-205ENST00000578537 SURF6O75683 361 aaKnown RBP16.08■□□□□ 0.16
CTC1-205ENST00000578537 KCNA3P22001 575 aa16.08■□□□□ 0.16
CTC1-205ENST00000578537 HOXA10P31260 410 aaPredicted RBP16.08■□□□□ 0.16
CTC1-205ENST00000578537 CCDC57Q2TAC2 916 aa16.08■□□□□ 0.16
CTC1-205ENST00000578537 C2CD5Q86YS7 1000 aa16.08■□□□□ 0.16
CTC1-205ENST00000578537 RWDD1Q9H446 243 aaPredicted RBP16.08■□□□□ 0.16
CTC1-205ENST00000578537 GPBP1L1Q9HC44 474 aaPredicted RBP16.08■□□□□ 0.16
CTC1-205ENST00000578537 ZNF609O15014 1411 aa16.08■□□□□ 0.16
CTC1-205ENST00000578537 OLFM4Q6UX06 510 aa16.07■□□□□ 0.16
CTC1-205ENST00000578537 SNED1Q8TER0 1413 aa16.07■□□□□ 0.16
CTC1-205ENST00000578537 WTIPA6NIX2 430 aaPredicted RBP16.06■□□□□ 0.16
CTC1-205ENST00000578537 EYA2O00167 538 aa16.06■□□□□ 0.16
CTC1-205ENST00000578537 HSP90B1P14625 803 aaKnown RBP16.06■□□□□ 0.16
CTC1-205ENST00000578537 DPEP1P16444 411 aa16.06■□□□□ 0.16
CTC1-205ENST00000578537 PDE6BP35913 854 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms