RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 HSP90B1P14625 803 aaKnown RBP17.46■□□□□ 0.39
CSNK1D-208ENST00000578501 SLFN5Q08AF3 891 aa17.46■□□□□ 0.39
CSNK1D-208ENST00000578501 CWC25Q9NXE8 425 aaPredicted RBP17.46■□□□□ 0.39
CSNK1D-208ENST00000578501 CACNA1FO60840 1977 aa17.46■□□□□ 0.39
CSNK1D-208ENST00000578501 NEXNQ0ZGT2 675 aa17.45■□□□□ 0.38
CSNK1D-208ENST00000578501 SF3B3Q15393 1217 aaKnown RBP17.45■□□□□ 0.38
CSNK1D-208ENST00000578501 CACNA1SQ13698 1873 aa17.45■□□□□ 0.38
CSNK1D-208ENST00000578501 IRS4O14654 1257 aaPredicted RBP17.44■□□□□ 0.38
CSNK1D-208ENST00000578501 BBOX1O75936 387 aa17.44■□□□□ 0.38
CSNK1D-208ENST00000578501 PCCAP05165 728 aaPredicted RBP17.44■□□□□ 0.38
CSNK1D-208ENST00000578501 IGKV5-2P06315 115 aa17.44■□□□□ 0.38
CSNK1D-208ENST00000578501 FKBP4Q02790 459 aaKnown RBP eCLIP17.44■□□□□ 0.385e-7■□□□□ 8.6
CSNK1D-208ENST00000578501 LDHDQ86WU2 507 aa17.44■□□□□ 0.38
CSNK1D-208ENST00000578501 SNED1Q8TER0 1413 aa17.44■□□□□ 0.38
CSNK1D-208ENST00000578501 CCDC88AQ3V6T2 1871 aa17.44■□□□□ 0.38
CSNK1D-208ENST00000578501 PPEF1O14829 653 aaPredicted RBP17.43■□□□□ 0.38
CSNK1D-208ENST00000578501 FKBP5Q13451 457 aaPredicted RBP17.43■□□□□ 0.38
CSNK1D-208ENST00000578501 DDX46Q7L014 1031 aaKnown RBP17.43■□□□□ 0.38
CSNK1D-208ENST00000578501 TRMT2AQ8IZ69 625 aaKnown RBP17.43■□□□□ 0.38
CSNK1D-208ENST00000578501 ABCC4O15439 1325 aa17.43■□□□□ 0.38
CSNK1D-208ENST00000578501 PASKQ96RG2 1323 aa17.43■□□□□ 0.38
CSNK1D-208ENST00000578501 DDX60Q8IY21 1712 aaKnown RBP17.42■□□□□ 0.38
CSNK1D-208ENST00000578501 TMEM88BA6NKF7 163 aa17.42■□□□□ 0.38
CSNK1D-208ENST00000578501 DDNO94850 711 aaPredicted RBP17.42■□□□□ 0.38
CSNK1D-208ENST00000578501 OLFM4Q6UX06 510 aa17.42■□□□□ 0.38
CSNK1D-208ENST00000578501 ZNF428Q96B54 188 aa17.42■□□□□ 0.38
CSNK1D-208ENST00000578501 PSMD1Q99460 953 aa17.42■□□□□ 0.38
CSNK1D-208ENST00000578501 WBP1LQ9NX94 342 aa17.42■□□□□ 0.38
CSNK1D-208ENST00000578501 ATP6V0A2Q9Y487 856 aa17.42■□□□□ 0.38
CSNK1D-208ENST00000578501 LAMB2P55268 1798 aa17.41■□□□□ 0.38
CSNK1D-208ENST00000578501 NEURL1BA8MQ27 555 aa17.41■□□□□ 0.38
CSNK1D-208ENST00000578501 POTEIP0CG38 1075 aa17.41■□□□□ 0.38
CSNK1D-208ENST00000578501 POTEJP0CG39 1038 aa17.41■□□□□ 0.38
CSNK1D-208ENST00000578501 VEGFBP49765 207 aa17.41■□□□□ 0.38
CSNK1D-208ENST00000578501 GRAPQ13588 217 aa17.41■□□□□ 0.38
CSNK1D-208ENST00000578501 TMC4Q7Z404 712 aa17.41■□□□□ 0.38
CSNK1D-208ENST00000578501 GRAPLQ8TC17 118 aaPredicted RBP17.41■□□□□ 0.38
CSNK1D-208ENST00000578501 DNAAF4Q8WXU2 420 aa17.41■□□□□ 0.38
CSNK1D-208ENST00000578501 TMX4Q9H1E5 349 aaPredicted RBP17.41■□□□□ 0.38
CSNK1D-208ENST00000578501 CDHR2Q9BYE9 1310 aa17.41■□□□□ 0.38
CSNK1D-208ENST00000578501 LBX1P52954 281 aa17.4■□□□□ 0.38
CSNK1D-208ENST00000578501 RTL5Q5HYW3 569 aaPredicted RBP17.4■□□□□ 0.38
CSNK1D-208ENST00000578501 SP8Q8IXZ3 490 aa17.4■□□□□ 0.38
CSNK1D-208ENST00000578501 CDCA7LQ96GN5 454 aa17.4■□□□□ 0.38
CSNK1D-208ENST00000578501 PDE8AO60658 829 aa17.39■□□□□ 0.37
CSNK1D-208ENST00000578501 CWF19L2Q2TBE0 894 aaKnown RBP17.39■□□□□ 0.37
CSNK1D-208ENST00000578501 LINS1Q8NG48 757 aa17.39■□□□□ 0.37
CSNK1D-208ENST00000578501 L3MBTL3Q96JM7 780 aaPredicted RBP17.39■□□□□ 0.37
CSNK1D-208ENST00000578501 PCDH10Q9P2E7 1040 aa17.39■□□□□ 0.37
CSNK1D-208ENST00000578501 DICER1Q9UPY3 1922 aaKnown RBP17.39■□□□□ 0.37
CSNK1D-208ENST00000578501 H7C1W4 665 aa17.38■□□□□ 0.37
CSNK1D-208ENST00000578501 CT47B1P0C2W7 299 aaPredicted RBP17.38■□□□□ 0.37
CSNK1D-208ENST00000578501 MAP2K1Q02750 393 aaPredicted RBP17.38■□□□□ 0.37
CSNK1D-208ENST00000578501 GCKRQ14397 625 aa17.38■□□□□ 0.37
CSNK1D-208ENST00000578501 ABHD8Q96I13 439 aa17.38■□□□□ 0.37
CSNK1D-208ENST00000578501 VPS33BQ9H267 617 aa17.38■□□□□ 0.37
CSNK1D-208ENST00000578501 TAF1DQ9H5J8 278 aaPredicted RBP17.38■□□□□ 0.37
CSNK1D-208ENST00000578501 ZNF277Q9NRM2 450 aaPredicted RBP17.38■□□□□ 0.37
CSNK1D-208ENST00000578501 ITGBL1O95965 494 aaPredicted RBP17.37■□□□□ 0.37
CSNK1D-208ENST00000578501 IARSP41252 1262 aaKnown RBP17.37■□□□□ 0.37
CSNK1D-208ENST00000578501 FAM161AQ3B820 660 aa17.37■□□□□ 0.37
CSNK1D-208ENST00000578501 CCDC152Q4G0S7 254 aa17.37■□□□□ 0.37
CSNK1D-208ENST00000578501 RTFDC1Q9BY42 306 aaPredicted RBP17.37■□□□□ 0.37
CSNK1D-208ENST00000578501 DEFB115Q30KQ5 88 aa17.36■□□□□ 0.37
CSNK1D-208ENST00000578501 RASSF10A6NK89 507 aa17.35■□□□□ 0.37
CSNK1D-208ENST00000578501 F6X3S4 739 aa17.35■□□□□ 0.37
CSNK1D-208ENST00000578501 RPS8P62241 208 aaKnown RBP17.35■□□□□ 0.37
CSNK1D-208ENST00000578501 ALDH1L2Q3SY69 923 aa17.35■□□□□ 0.37
CSNK1D-208ENST00000578501 EAPPQ56P03 285 aaPredicted RBP17.35■□□□□ 0.37
CSNK1D-208ENST00000578501 BEND3Q5T5X7 828 aa17.35■□□□□ 0.37
CSNK1D-208ENST00000578501 PNMA8AQ86V59 439 aaPredicted RBP17.35■□□□□ 0.37
CSNK1D-208ENST00000578501 MRPL50Q8N5N7 158 aaKnown RBP17.35■□□□□ 0.37
CSNK1D-208ENST00000578501 SUPT20HQ8NEM7 779 aa17.35■□□□□ 0.37
CSNK1D-208ENST00000578501 JARID2Q92833 1246 aaPredicted RBP17.35■□□□□ 0.37
CSNK1D-208ENST00000578501 CELF1Q92879 486 aaKnown RBP17.35■□□□□ 0.37
CSNK1D-208ENST00000578501 PLA2G12BQ9BX93 195 aa17.35■□□□□ 0.37
CSNK1D-208ENST00000578501 CLEC11AQ9Y240 323 aa17.35■□□□□ 0.37
CSNK1D-208ENST00000578501 FZD9O00144 591 aa17.34■□□□□ 0.37
CSNK1D-208ENST00000578501 HSPA8P11142 646 aaKnown RBP17.34■□□□□ 0.37
CSNK1D-208ENST00000578501 SCN4AP35499 1836 aa17.34■□□□□ 0.37
CSNK1D-208ENST00000578501 CASP7P55210 303 aa17.34■□□□□ 0.37
CSNK1D-208ENST00000578501 CTSWP56202 376 aa17.34■□□□□ 0.37
CSNK1D-208ENST00000578501 UBE3BQ7Z3V4 1068 aa17.34■□□□□ 0.37
CSNK1D-208ENST00000578501 MPNDQ8N594 471 aa17.34■□□□□ 0.37
CSNK1D-208ENST00000578501 SSH1Q8WYL5 1049 aa17.34■□□□□ 0.37
CSNK1D-208ENST00000578501 HACL1Q9UJ83 578 aa17.34■□□□□ 0.37
CSNK1D-208ENST00000578501 RTL9Q8NET4 1388 aa17.33■□□□□ 0.36
CSNK1D-208ENST00000578501 PTPRCP08575 1304 aa17.33■□□□□ 0.36
CSNK1D-208ENST00000578501 MLLT1Q03111 559 aaPredicted RBP17.33■□□□□ 0.36
CSNK1D-208ENST00000578501 DPP8Q6V1X1 898 aaPredicted RBP17.33■□□□□ 0.36
CSNK1D-208ENST00000578501 SLC51AQ86UW1 340 aa17.33■□□□□ 0.36
CSNK1D-208ENST00000578501 TTLL11Q8NHH1 800 aa17.33■□□□□ 0.36
CSNK1D-208ENST00000578501 JDP2Q8WYK2 163 aa17.33■□□□□ 0.36
CSNK1D-208ENST00000578501 ALDH1L1O75891 902 aa17.32■□□□□ 0.36
CSNK1D-208ENST00000578501 SEC31BQ9NQW1 1179 aa17.32■□□□□ 0.36
CSNK1D-208ENST00000578501 WDR33Q9C0J8 1336 aaKnown RBP17.31■□□□□ 0.36
CSNK1D-208ENST00000578501 LRRC37AA6NMS7 1700 aa17.31■□□□□ 0.36
CSNK1D-208ENST00000578501 EPHX2P34913 555 aa17.31■□□□□ 0.36
CSNK1D-208ENST00000578501 CNTROBQ8N137 903 aa17.31■□□□□ 0.36
CSNK1D-208ENST00000578501 LARGE2Q8N3Y3 721 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms