RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 TM4SF1P30408 202 aa16.63■□□□□ 0.25
SRSF1-202ENST00000578430 CTSWP56202 376 aa16.63■□□□□ 0.25
SRSF1-202ENST00000578430 NFIXQ14938 502 aa16.63■□□□□ 0.25
SRSF1-202ENST00000578430 BICDL1Q6ZP65 573 aa16.63■□□□□ 0.25
SRSF1-202ENST00000578430 CHD1LQ86WJ1 897 aa16.63■□□□□ 0.25
SRSF1-202ENST00000578430 NBPF5PQ86XG9 351 aaPredicted RBP16.63■□□□□ 0.25
SRSF1-202ENST00000578430 ERC1Q8IUD2 1116 aa16.63■□□□□ 0.25
SRSF1-202ENST00000578430 ANO8Q9HCE9 1232 aaPredicted RBP16.63■□□□□ 0.25
SRSF1-202ENST00000578430 COPRSQ9NQ92 184 aa16.63■□□□□ 0.25
SRSF1-202ENST00000578430 LAMB2P55268 1798 aa16.63■□□□□ 0.25
SRSF1-202ENST00000578430 GTF2E1P29083 439 aaPredicted RBP16.62■□□□□ 0.25
SRSF1-202ENST00000578430 ANKRD45Q5TZF3 282 aa16.62■□□□□ 0.25
SRSF1-202ENST00000578430 FBXO3Q9UK99 471 aa16.62■□□□□ 0.25
SRSF1-202ENST00000578430 MYH3P11055 1940 aa16.62■□□□□ 0.25
SRSF1-202ENST00000578430 RIC1Q4ADV7 1423 aa16.62■□□□□ 0.25
SRSF1-202ENST00000578430 FAM177BA6PVY3 158 aa16.61■□□□□ 0.25
SRSF1-202ENST00000578430 RFX5P48382 616 aaPredicted RBP16.61■□□□□ 0.25
SRSF1-202ENST00000578430 CCDC57Q2TAC2 916 aa16.61■□□□□ 0.25
SRSF1-202ENST00000578430 SYNE4Q8N205 404 aa16.61■□□□□ 0.25
SRSF1-202ENST00000578430 TTLL11Q8NHH1 800 aa16.61■□□□□ 0.25
SRSF1-202ENST00000578430 KIF1BPQ96EK5 621 aa16.61■□□□□ 0.25
SRSF1-202ENST00000578430 LRRCC1Q9C099 1032 aa16.61■□□□□ 0.25
SRSF1-202ENST00000578430 EXOC6BQ9Y2D4 811 aa16.61■□□□□ 0.25
SRSF1-202ENST00000578430 CHMP3Q9Y3E7 222 aa16.61■□□□□ 0.25
SRSF1-202ENST00000578430 RTL9Q8NET4 1388 aa16.61■□□□□ 0.25
SRSF1-202ENST00000578430 PTPN12Q05209 780 aaKnown RBP16.6■□□□□ 0.25
SRSF1-202ENST00000578430 G3BP1Q13283 466 aaKnown RBP eCLIP16.6■□□□□ 0.25
SRSF1-202ENST00000578430 IFIT5Q13325 482 aaKnown RBP16.6■□□□□ 0.25
SRSF1-202ENST00000578430 CCDC152Q4G0S7 254 aa16.6■□□□□ 0.25
SRSF1-202ENST00000578430 PDGFDQ9GZP0 370 aaPredicted RBP16.6■□□□□ 0.25
SRSF1-202ENST00000578430 HCLS1P14317 486 aaPredicted RBP16.59■□□□□ 0.25
SRSF1-202ENST00000578430 SF3B3Q15393 1217 aaKnown RBP16.59■□□□□ 0.25
SRSF1-202ENST00000578430 ERFEQ4G0M1 354 aa16.59■□□□□ 0.25
SRSF1-202ENST00000578430 NUTM1Q86Y26 1132 aa16.59■□□□□ 0.25
SRSF1-202ENST00000578430 CNBD1Q8NA66 436 aa16.59■□□□□ 0.25
SRSF1-202ENST00000578430 DDX60Q8IY21 1712 aaKnown RBP16.59■□□□□ 0.25
SRSF1-202ENST00000578430 ANKRD18BA2A2Z9 1011 aa16.58■□□□□ 0.24
SRSF1-202ENST00000578430 NPHP1O15259 732 aa16.58■□□□□ 0.24
SRSF1-202ENST00000578430 CIAO1O76071 339 aa16.58■□□□□ 0.24
SRSF1-202ENST00000578430 OS9Q13438 667 aaPredicted RBP16.58■□□□□ 0.24
SRSF1-202ENST00000578430 SLC16A10Q8TF71 515 aa16.58■□□□□ 0.24
SRSF1-202ENST00000578430 NLRP3Q96P20 1036 aa16.58■□□□□ 0.24
SRSF1-202ENST00000578430 LNPKQ9C0E8 428 aa16.58■□□□□ 0.24
SRSF1-202ENST00000578430 POLRMTO00411 1230 aaKnown RBP16.57■□□□□ 0.24
SRSF1-202ENST00000578430 SERPINB2P05120 415 aa16.57■□□□□ 0.24
SRSF1-202ENST00000578430 ST5P78524 1137 aa16.57■□□□□ 0.24
SRSF1-202ENST00000578430 FAM161AQ3B820 660 aa16.57■□□□□ 0.24
SRSF1-202ENST00000578430 TAF7LQ5H9L4 462 aa16.57■□□□□ 0.24
SRSF1-202ENST00000578430 RHPN1Q8TCX5 695 aa16.57■□□□□ 0.24
SRSF1-202ENST00000578430 PA2G4Q9UQ80 394 aaKnown RBP16.57■□□□□ 0.24
SRSF1-202ENST00000578430 ABCC12Q96J65 1359 aa16.56■□□□□ 0.24
SRSF1-202ENST00000578430 ZBTB7AO95365 584 aa16.56■□□□□ 0.24
SRSF1-202ENST00000578430 ITGA6P23229 1130 aa16.56■□□□□ 0.24
SRSF1-202ENST00000578430 IL15P40933 162 aaPredicted RBP16.56■□□□□ 0.24
SRSF1-202ENST00000578430 PRR5LQ6MZQ0 368 aa16.56■□□□□ 0.24
SRSF1-202ENST00000578430 GREM2Q9H772 168 aa16.56■□□□□ 0.24
SRSF1-202ENST00000578430 EYA2O00167 538 aa16.55■□□□□ 0.24
SRSF1-202ENST00000578430 DDR1Q08345 913 aa16.55■□□□□ 0.24
SRSF1-202ENST00000578430 PARP3Q9Y6F1 533 aa16.55■□□□□ 0.24
SRSF1-202ENST00000578430 APBB1O00213 710 aa16.54■□□□□ 0.24
SRSF1-202ENST00000578430 PDE4AP27815 886 aa16.54■□□□□ 0.24
SRSF1-202ENST00000578430 CLASRPQ8N2M8 674 aaKnown RBP16.54■□□□□ 0.24
SRSF1-202ENST00000578430 CDC5LQ99459 802 aaKnown RBP16.54■□□□□ 0.24
SRSF1-202ENST00000578430 SIL1Q9H173 461 aa16.54■□□□□ 0.24
SRSF1-202ENST00000578430 NRXN2Q9P2S2 1712 aa16.53■□□□□ 0.24
SRSF1-202ENST00000578430 SASH1O94885 1247 aa16.53■□□□□ 0.24
SRSF1-202ENST00000578430 MMP10P09238 476 aa16.53■□□□□ 0.24
SRSF1-202ENST00000578430 PTGER2P43116 358 aa16.53■□□□□ 0.24
SRSF1-202ENST00000578430 RGS3P49796 1198 aa16.53■□□□□ 0.24
SRSF1-202ENST00000578430 KLHDC4Q8TBB5 520 aa16.53■□□□□ 0.24
SRSF1-202ENST00000578430 GPR108Q9NPR9 543 aa16.53■□□□□ 0.24
SRSF1-202ENST00000578430 ATF5Q9Y2D1 282 aaPredicted RBP16.53■□□□□ 0.24
SRSF1-202ENST00000578430 SMARCA5O60264 1052 aaPredicted RBP16.52■□□□□ 0.24
SRSF1-202ENST00000578430 LDHAL6AQ6ZMR3 332 aa16.52■□□□□ 0.24
SRSF1-202ENST00000578430 ATG9AQ7Z3C6 839 aa16.52■□□□□ 0.24
SRSF1-202ENST00000578430 CCDC85AQ96PX6 553 aaPredicted RBP16.52■□□□□ 0.24
SRSF1-202ENST00000578430 IGHMBP2P38935 993 aaKnown RBP16.51■□□□□ 0.23
SRSF1-202ENST00000578430 ZNF594Q96JF6 807 aaPredicted RBP16.51■□□□□ 0.23
SRSF1-202ENST00000578430 BRIP1Q9BX63 1249 aa16.51■□□□□ 0.23
SRSF1-202ENST00000578430 OSBPL3Q9H4L5 887 aa16.51■□□□□ 0.23
SRSF1-202ENST00000578430 AOX1Q06278 1338 aa16.5■□□□□ 0.23
SRSF1-202ENST00000578430 KLRG2A4D1S0 409 aaPredicted RBP16.5■□□□□ 0.23
SRSF1-202ENST00000578430 CRY2Q49AN0 593 aa16.5■□□□□ 0.23
SRSF1-202ENST00000578430 DDX46Q7L014 1031 aaKnown RBP16.5■□□□□ 0.23
SRSF1-202ENST00000578430 ANKRD18AQ8IVF6 992 aa16.5■□□□□ 0.23
SRSF1-202ENST00000578430 PLEKHM2Q8IWE5 1019 aa16.5■□□□□ 0.23
SRSF1-202ENST00000578430 MPHOSPH8Q99549 860 aa16.5■□□□□ 0.23
SRSF1-202ENST00000578430 IL1RAPL2Q9NP60 686 aa16.5■□□□□ 0.23
SRSF1-202ENST00000578430 CNNM1Q9NRU3 951 aa16.5■□□□□ 0.23
SRSF1-202ENST00000578430 CEP126Q9P2H0 1117 aa16.5■□□□□ 0.23
SRSF1-202ENST00000578430 STAP2Q9UGK3 403 aa16.5■□□□□ 0.23
SRSF1-202ENST00000578430 RIPOR2Q9Y4F9 1068 aa16.5■□□□□ 0.23
SRSF1-202ENST00000578430 MROH5Q6ZUA9 1318 aa16.49■□□□□ 0.23
SRSF1-202ENST00000578430 SALL3Q9BXA9 1300 aa16.49■□□□□ 0.23
SRSF1-202ENST00000578430 LRRC24Q50LG9 513 aa16.49■□□□□ 0.23
SRSF1-202ENST00000578430 C3orf67Q6ZVT6 689 aa16.49■□□□□ 0.23
SRSF1-202ENST00000578430 SKAP1Q86WV1 359 aa16.49■□□□□ 0.23
SRSF1-202ENST00000578430 GPATCH3Q96I76 525 aa16.49■□□□□ 0.23
SRSF1-202ENST00000578430 SEC31BQ9NQW1 1179 aa16.49■□□□□ 0.23
SRSF1-202ENST00000578430 AKAP2Q9Y2D5 859 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms