RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	RASSF10	A6NK89	507 aa		5.85	□□□□□ -1.47
PPP4R1-209	ENST00000578329	IGKV5-2	P06315	115 aa		5.85	□□□□□ -1.47
PPP4R1-209	ENST00000578329	HOXB7	P09629	217 aa		5.85	□□□□□ -1.47
PPP4R1-209	ENST00000578329	GPSM2	P81274	684 aa		5.85	□□□□□ -1.47
PPP4R1-209	ENST00000578329	KIAA2012	Q0VF49	1180 aa		5.85	□□□□□ -1.47
PPP4R1-209	ENST00000578329	CC2D2B	Q6DHV5	1058 aa		5.85	□□□□□ -1.47
PPP4R1-209	ENST00000578329	SP8	Q8IXZ3	490 aa		5.85	□□□□□ -1.47
PPP4R1-209	ENST00000578329	PLBD2	Q8NHP8	589 aa		5.85	□□□□□ -1.47
PPP4R1-209	ENST00000578329	RPGR	Q92834	1020 aa	Known RBP	5.85	□□□□□ -1.47
PPP4R1-209	ENST00000578329	SPINK5	Q9NQ38	1064 aa	Predicted RBP	5.85	□□□□□ -1.47
PPP4R1-209	ENST00000578329	WBP1L	Q9NX94	342 aa		5.85	□□□□□ -1.47
PPP4R1-209	ENST00000578329	GPRC5D	Q9NZD1	345 aa		5.85	□□□□□ -1.47
PPP4R1-209	ENST00000578329	POLR2A	P24928	1970 aa	Known RBP	5.85	□□□□□ -1.47
PPP4R1-209	ENST00000578329	TRPM7	Q96QT4	1865 aa		5.84	□□□□□ -1.47
PPP4R1-209	ENST00000578329	SH3TC1	Q8TE82	1336 aa		5.84	□□□□□ -1.47
PPP4R1-209	ENST00000578329	IQCA1L	A6NCM1	817 aa		5.84	□□□□□ -1.47
PPP4R1-209	ENST00000578329	TMEM88B	A6NKF7	163 aa		5.84	□□□□□ -1.47
PPP4R1-209	ENST00000578329	ELL2	O00472	640 aa	Predicted RBP	5.84	□□□□□ -1.47
PPP4R1-209	ENST00000578329	NPHP1	O15259	732 aa		5.84	□□□□□ -1.47
PPP4R1-209	ENST00000578329	RAD17	O75943	681 aa		5.84	□□□□□ -1.47
PPP4R1-209	ENST00000578329	GMPS	P49915	693 aa	Predicted RBP	5.84	□□□□□ -1.47
PPP4R1-209	ENST00000578329	CASP7	P55210	303 aa		5.84	□□□□□ -1.47
PPP4R1-209	ENST00000578329	GRAP	Q13588	217 aa		5.84	□□□□□ -1.47
PPP4R1-209	ENST00000578329	EAPP	Q56P03	285 aa	Predicted RBP	5.84	□□□□□ -1.47
PPP4R1-209	ENST00000578329	RTL5	Q5HYW3	569 aa	Predicted RBP	5.84	□□□□□ -1.47
PPP4R1-209	ENST00000578329	HDGFL1	Q5TGJ6	251 aa		5.84	□□□□□ -1.47
PPP4R1-209	ENST00000578329	ANKRD13D	Q6ZTN6	518 aa		5.84	□□□□□ -1.47
PPP4R1-209	ENST00000578329	PPP1R42	Q7Z4L9	355 aa		5.84	□□□□□ -1.47
PPP4R1-209	ENST00000578329	LARGE2	Q8N3Y3	721 aa		5.84	□□□□□ -1.47
PPP4R1-209	ENST00000578329	GRAPL	Q8TC17	118 aa	Predicted RBP	5.84	□□□□□ -1.47
PPP4R1-209	ENST00000578329	TSR2	Q969E8	191 aa	Known RBP	5.84	□□□□□ -1.47
PPP4R1-209	ENST00000578329	RBM17	Q96I25	401 aa	Known RBP	5.84	□□□□□ -1.47
PPP4R1-209	ENST00000578329	NLRP3	Q96P20	1036 aa		5.84	□□□□□ -1.47
PPP4R1-209	ENST00000578329	TRMT112	Q9UI30	125 aa	Known RBP	5.84	□□□□□ -1.47
PPP4R1-209	ENST00000578329	ZNRF3	Q9ULT6	936 aa		5.84	□□□□□ -1.47
PPP4R1-209	ENST00000578329	ZBTB12	Q9Y330	459 aa	Predicted RBP	5.84	□□□□□ -1.47
PPP4R1-209	ENST00000578329	GJA3	Q9Y6H8	435 aa		5.84	□□□□□ -1.47
PPP4R1-209	ENST00000578329	PSME4	Q14997	1843 aa		5.83	□□□□□ -1.48
PPP4R1-209	ENST00000578329	IRS2	Q9Y4H2	1338 aa		5.83	□□□□□ -1.48
PPP4R1-209	ENST00000578329	PPIP5K2	O43314	1243 aa		5.83	□□□□□ -1.48
PPP4R1-209	ENST00000578329	BBOX1	O75936	387 aa		5.83	□□□□□ -1.48
PPP4R1-209	ENST00000578329	HSPA8	P11142	646 aa	Known RBP	5.83	□□□□□ -1.48
PPP4R1-209	ENST00000578329	GTF2E1	P29083	439 aa	Predicted RBP	5.83	□□□□□ -1.48
PPP4R1-209	ENST00000578329	NPM2	Q86SE8	214 aa	Known RBP	5.83	□□□□□ -1.48
PPP4R1-209	ENST00000578329	GML	Q99445	158 aa		5.83	□□□□□ -1.48
PPP4R1-209	ENST00000578329	GLIS2	Q9BZE0	524 aa	Predicted RBP	5.83	□□□□□ -1.48
PPP4R1-209	ENST00000578329	IFT57	Q9NWB7	429 aa		5.83	□□□□□ -1.48
PPP4R1-209	ENST00000578329	DBF4	Q9UBU7	674 aa	Predicted RBP	5.83	□□□□□ -1.48
PPP4R1-209	ENST00000578329	LAS1L	Q9Y4W2	734 aa	Known RBP	5.83	□□□□□ -1.48
PPP4R1-209	ENST00000578329	PSMD14	O00487	310 aa		5.82	□□□□□ -1.48
PPP4R1-209	ENST00000578329	IRS4	O14654	1257 aa	Predicted RBP	5.82	□□□□□ -1.48
PPP4R1-209	ENST00000578329	AOC2	O75106	756 aa		5.82	□□□□□ -1.48
PPP4R1-209	ENST00000578329	KLRK1	P26718	216 aa		5.82	□□□□□ -1.48
PPP4R1-209	ENST00000578329	LMOD3	Q0VAK6	560 aa		5.82	□□□□□ -1.48
PPP4R1-209	ENST00000578329	CYP4F22	Q6NT55	531 aa		5.82	□□□□□ -1.48
PPP4R1-209	ENST00000578329	USP50	Q70EL3	339 aa	Predicted RBP	5.82	□□□□□ -1.48
PPP4R1-209	ENST00000578329	SAMD7	Q7Z3H4	446 aa		5.82	□□□□□ -1.48
PPP4R1-209	ENST00000578329	PNMA8A	Q86V59	439 aa	Predicted RBP	5.82	□□□□□ -1.48
PPP4R1-209	ENST00000578329	TXNRD3	Q86VQ6	643 aa		5.82	□□□□□ -1.48
PPP4R1-209	ENST00000578329	MPND	Q8N594	471 aa		5.82	□□□□□ -1.48
PPP4R1-209	ENST00000578329	TBC1D16	Q8TBP0	767 aa		5.82	□□□□□ -1.48
PPP4R1-209	ENST00000578329	PNN	Q9H307	717 aa	Known RBP	5.82	□□□□□ -1.48
PPP4R1-209	ENST00000578329	DBNDD1	Q9H9R9	158 aa		5.82	□□□□□ -1.48
PPP4R1-209	ENST00000578329	TLL2	Q9Y6L7	1015 aa		5.82	□□□□□ -1.48
PPP4R1-209	ENST00000578329		A0A1B0GUL6	1792 aa		5.82	□□□□□ -1.48
PPP4R1-209	ENST00000578329	SPEF2	Q9C093	1822 aa		5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	AOX1	Q06278	1338 aa		5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	WDR33	Q9C0J8	1336 aa	Known RBP	5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	FAM155A	B1AL88	458 aa	Predicted RBP	5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	SNAP23	O00161	211 aa		5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	PCCA	P05165	728 aa	Predicted RBP	5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	LBX1	P52954	281 aa		5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	EIF6	P56537	245 aa	Known RBP	5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	RPS8	P62241	208 aa	Known RBP	5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	DOK7	Q18PE1	504 aa		5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	CWF19L2	Q2TBE0	894 aa	Known RBP	5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	DEFB115	Q30KQ5	88 aa		5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	HSP90AB3P	Q58FF7	597 aa		5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	CIAPIN1	Q6FI81	312 aa		5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	DPP8	Q6V1X1	898 aa	Predicted RBP	5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	SAPCD2	Q86UD0	394 aa		5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	WWC1	Q8IX03	1113 aa		5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	NIM1K	Q8IY84	436 aa		5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	TNS4	Q8IZW8	715 aa		5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	JDP2	Q8WYK2	163 aa		5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	MYD88	Q99836	296 aa		5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	METTL22	Q9BUU2	404 aa	Predicted RBP	5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	MXD3	Q9BW11	206 aa		5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	VPS33B	Q9H267	617 aa		5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	ADARB2	Q9NS39	739 aa	Known RBP	5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	HYPK	Q9NX55	129 aa		5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	PODXL2	Q9NZ53	605 aa		5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	ZNF609	O15014	1411 aa		5.81	□□□□□ -1.48
PPP4R1-209	ENST00000578329	PI4KAP2	A4QPH2	592 aa		5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329	ADM5	C9JUS6	153 aa		5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329		H7C1W4	665 aa		5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329	RIMBP2	O15034	1052 aa		5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329	ECE2	O60344	883 aa		5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329	CAPN15	O75808	1086 aa		5.8	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms