RNA–Protein interactions for RNA: ENST00000578217.1

SLC46A1-201, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 596 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-201ENST00000578217 NBPF5PQ86XG9 351 aaPredicted RBP11.01□□□□□ -0.65
SLC46A1-201ENST00000578217 PDCD7Q8N8D1 485 aaKnown RBP11.01□□□□□ -0.65
SLC46A1-201ENST00000578217 ZNF408Q9H9D4 720 aa11.01□□□□□ -0.65
SLC46A1-201ENST00000578217 HEG1Q9ULI3 1381 aa11.01□□□□□ -0.65
SLC46A1-201ENST00000578217 SZT2Q5T011 3432 aa11□□□□□ -0.65
SLC46A1-201ENST00000578217 PRAMEF22A3QJZ6 481 aa11□□□□□ -0.65
SLC46A1-201ENST00000578217 FAM155AB1AL88 458 aaPredicted RBP11□□□□□ -0.65
SLC46A1-201ENST00000578217 HMOX1P09601 288 aa11□□□□□ -0.65
SLC46A1-201ENST00000578217 LMOD1P29536 600 aaPredicted RBP11□□□□□ -0.65
SLC46A1-201ENST00000578217 USP50Q70EL3 339 aaPredicted RBP11□□□□□ -0.65
SLC46A1-201ENST00000578217 DZIP3Q86Y13 1208 aaKnown RBP11□□□□□ -0.65
SLC46A1-201ENST00000578217 FBXO22Q8NEZ5 403 aa11□□□□□ -0.65
SLC46A1-201ENST00000578217 PSMD1Q99460 953 aa11□□□□□ -0.65
SLC46A1-201ENST00000578217 OCEL1Q9H607 264 aa11□□□□□ -0.65
SLC46A1-201ENST00000578217 SCUBE2Q9NQ36 999 aa11□□□□□ -0.65
SLC46A1-201ENST00000578217 ABCC12Q96J65 1359 aa11□□□□□ -0.65
SLC46A1-201ENST00000578217 EIF6P56537 245 aaKnown RBP10.99□□□□□ -0.65
SLC46A1-201ENST00000578217 CDCA8Q53HL2 280 aa10.99□□□□□ -0.65
SLC46A1-201ENST00000578217 HABP4Q5JVS0 413 aaKnown RBP10.99□□□□□ -0.65
SLC46A1-201ENST00000578217 JDP2Q8WYK2 163 aa10.99□□□□□ -0.65
SLC46A1-201ENST00000578217 HHIPL1Q96JK4 782 aa10.99□□□□□ -0.65
SLC46A1-201ENST00000578217 GPRC5DQ9NZD1 345 aa10.99□□□□□ -0.65
SLC46A1-201ENST00000578217 SIPA1L3O60292 1781 aaPredicted RBP10.98□□□□□ -0.65
SLC46A1-201ENST00000578217 TRPA1O75762 1119 aa10.98□□□□□ -0.65
SLC46A1-201ENST00000578217 ZNF790Q6PG37 636 aa10.98□□□□□ -0.65
SLC46A1-201ENST00000578217 IL17REQ8NFR9 667 aa10.98□□□□□ -0.65
SLC46A1-201ENST00000578217 TRPM4Q8TD43 1214 aa10.98□□□□□ -0.65
SLC46A1-201ENST00000578217 MS4A4AQ96JQ5 239 aa10.98□□□□□ -0.65
SLC46A1-201ENST00000578217 USP16Q9Y5T5 823 aa10.98□□□□□ -0.65
SLC46A1-201ENST00000578217 POLR2AP24928 1970 aaKnown RBP10.97□□□□□ -0.65
SLC46A1-201ENST00000578217 GMPSP49915 693 aaPredicted RBP10.97□□□□□ -0.65
SLC46A1-201ENST00000578217 NOGQ13253 232 aa10.97□□□□□ -0.65
SLC46A1-201ENST00000578217 LARGE2Q8N3Y3 721 aa10.97□□□□□ -0.65
SLC46A1-201ENST00000578217 BBXQ8WY36 941 aaPredicted RBP10.97□□□□□ -0.65
SLC46A1-201ENST00000578217 ADARB2Q9NS39 739 aaKnown RBP10.97□□□□□ -0.65
SLC46A1-201ENST00000578217 RNF186Q9NXI6 227 aa10.97□□□□□ -0.65
SLC46A1-201ENST00000578217 PGAP2Q9UHJ9 254 aa10.97□□□□□ -0.65
SLC46A1-201ENST00000578217 HPS5Q9UPZ3 1129 aa10.97□□□□□ -0.65
SLC46A1-201ENST00000578217 KIAA0100Q14667 2235 aaKnown RBP10.97□□□□□ -0.65
SLC46A1-201ENST00000578217 TCERG1O14776 1098 aaKnown RBP10.96□□□□□ -0.65
SLC46A1-201ENST00000578217 SEC24BO95487 1268 aa10.96□□□□□ -0.65
SLC46A1-201ENST00000578217 HUNKP57058 714 aa10.96□□□□□ -0.65
SLC46A1-201ENST00000578217 KIF23Q02241 960 aaPredicted RBP10.96□□□□□ -0.65
SLC46A1-201ENST00000578217 CXCL9Q07325 125 aa10.96□□□□□ -0.65
SLC46A1-201ENST00000578217 HLFQ16534 295 aa10.96□□□□□ -0.65
SLC46A1-201ENST00000578217 CRY2Q49AN0 593 aa10.96□□□□□ -0.65
SLC46A1-201ENST00000578217 C3orf67Q6ZVT6 689 aa10.96□□□□□ -0.65
SLC46A1-201ENST00000578217 TTC5Q8N0Z6 440 aa10.96□□□□□ -0.65
SLC46A1-201ENST00000578217 CENPFP49454 3210 aa10.96□□□□□ -0.66
SLC46A1-201ENST00000578217 NPC1L1Q9UHC9 1359 aa10.95□□□□□ -0.66
SLC46A1-201ENST00000578217 NBPF26B4DH59 902 aa10.95□□□□□ -0.66
SLC46A1-201ENST00000578217 AOC3Q16853 763 aa10.95□□□□□ -0.66
SLC46A1-201ENST00000578217 NBPF10Q6P3W6 841 aaKnown RBP10.95□□□□□ -0.66
SLC46A1-201ENST00000578217 CTU1Q7Z7A3 348 aaKnown RBP10.95□□□□□ -0.66
SLC46A1-201ENST00000578217 USP48Q86UV5 1035 aa10.95□□□□□ -0.66
SLC46A1-201ENST00000578217 NUTM1Q86Y26 1132 aa10.95□□□□□ -0.66
SLC46A1-201ENST00000578217 NBPF15Q8N660 670 aa10.95□□□□□ -0.66
SLC46A1-201ENST00000578217 POLR3GLQ9BT43 218 aa10.95□□□□□ -0.66
SLC46A1-201ENST00000578217 NIP7Q9Y221 180 aaKnown RBP eCLIP10.95□□□□□ -0.66
SLC46A1-201ENST00000578217 AKAP11Q9UKA4 1901 aa10.94□□□□□ -0.66
SLC46A1-201ENST00000578217 EGFRP00533 1210 aa10.94□□□□□ -0.66
SLC46A1-201ENST00000578217 PLCG2P16885 1265 aa10.94□□□□□ -0.66
SLC46A1-201ENST00000578217 FXR1P51114 621 aaKnown RBP eCLIP10.94□□□□□ -0.66
SLC46A1-201ENST00000578217 CLEC4GQ6UXB4 293 aa10.94□□□□□ -0.66
SLC46A1-201ENST00000578217 PANK3Q9H999 370 aa10.94□□□□□ -0.66
SLC46A1-201ENST00000578217 BRCA2P51587 3418 aa10.94□□□□□ -0.66
SLC46A1-201ENST00000578217 RANBP2P49792 3224 aaKnown RBP10.93□□□□□ -0.66
SLC46A1-201ENST00000578217 ALDH1B1P30837 517 aa10.93□□□□□ -0.66
SLC46A1-201ENST00000578217 RGMBQ6NW40 437 aa10.93□□□□□ -0.66
SLC46A1-201ENST00000578217 TPTE2Q6XPS3 522 aa10.93□□□□□ -0.66
SLC46A1-201ENST00000578217 MORC1Q86VD1 984 aa10.93□□□□□ -0.66
SLC46A1-201ENST00000578217 NIM1KQ8IY84 436 aa10.93□□□□□ -0.66
SLC46A1-201ENST00000578217 CSRNP1Q96S65 589 aa10.93□□□□□ -0.66
SLC46A1-201ENST00000578217 TEX13AQ9BXU3 409 aaPredicted RBP10.93□□□□□ -0.66
SLC46A1-201ENST00000578217 SAGE1Q9NXZ1 904 aa10.93□□□□□ -0.66
SLC46A1-201ENST00000578217 PPIP5K2O43314 1243 aa10.92□□□□□ -0.66
SLC46A1-201ENST00000578217 FMNL2Q96PY5 1086 aa10.92□□□□□ -0.66
SLC46A1-201ENST00000578217 ADM5C9JUS6 153 aa10.91□□□□□ -0.66
SLC46A1-201ENST00000578217 GTPBP6O43824 516 aaPredicted RBP10.91□□□□□ -0.66
SLC46A1-201ENST00000578217 RAD17O75943 681 aa10.91□□□□□ -0.66
SLC46A1-201ENST00000578217 HOXA10P31260 410 aaPredicted RBP10.91□□□□□ -0.66
SLC46A1-201ENST00000578217 CDC37L1Q7L3B6 337 aa10.91□□□□□ -0.66
SLC46A1-201ENST00000578217 YDJCA8MPS7 323 aa10.9□□□□□ -0.66
SLC46A1-201ENST00000578217 SAMD7Q7Z3H4 446 aa10.9□□□□□ -0.66
SLC46A1-201ENST00000578217 GBA2Q9HCG7 927 aaPredicted RBP10.9□□□□□ -0.66
SLC46A1-201ENST00000578217 ZNRF3Q9ULT6 936 aa10.9□□□□□ -0.66
SLC46A1-201ENST00000578217 RIC1Q4ADV7 1423 aa10.9□□□□□ -0.66
SLC46A1-201ENST00000578217 COL6A3P12111 3177 aa10.89□□□□□ -0.67
SLC46A1-201ENST00000578217 ASTN2O75129 1339 aaPredicted RBP10.89□□□□□ -0.67
SLC46A1-201ENST00000578217 PPEF1O14829 653 aaPredicted RBP10.89□□□□□ -0.67
SLC46A1-201ENST00000578217 SLC10A3P09131 477 aa10.89□□□□□ -0.67
SLC46A1-201ENST00000578217 ZNF157P51786 506 aaPredicted RBP10.89□□□□□ -0.67
SLC46A1-201ENST00000578217 TEFQ10587 303 aa10.89□□□□□ -0.67
SLC46A1-201ENST00000578217 CC2D2BQ6DHV5 1058 aa10.89□□□□□ -0.67
SLC46A1-201ENST00000578217 ZC3H15Q8WU90 426 aaKnown RBP10.89□□□□□ -0.67
SLC46A1-201ENST00000578217 CNOT7Q9UIV1 285 aaKnown RBP10.89□□□□□ -0.67
SLC46A1-201ENST00000578217 CEMIPQ8WUJ3 1361 aa10.89□□□□□ -0.67
SLC46A1-201ENST00000578217 UBN2Q6ZU65 1347 aa10.88□□□□□ -0.67
SLC46A1-201ENST00000578217 PPP1R37O75864 691 aa10.88□□□□□ -0.67
SLC46A1-201ENST00000578217 TBC1D8O95759 1140 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms