RNA–Protein interactions for RNA: ENST00000577706.1

TOP2A-203, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-203ENST00000577706 NGLY1Q96IV0 654 aa7.37□□□□□ -1.23
TOP2A-203ENST00000577706 WEE1P30291 646 aa7.36□□□□□ -1.23
TOP2A-203ENST00000577706 AFF1P51825 1210 aaKnown RBP7.36□□□□□ -1.23
TOP2A-203ENST00000577706 ELOAQ14241 798 aaKnown RBP7.36□□□□□ -1.23
TOP2A-203ENST00000577706 BTLAQ7Z6A9 289 aa7.36□□□□□ -1.23
TOP2A-203ENST00000577706 FMR1NBQ8N0W7 255 aaPredicted RBP7.36□□□□□ -1.23
TOP2A-203ENST00000577706 CCDC82Q8N4S0 544 aa7.36□□□□□ -1.23
TOP2A-203ENST00000577706 STK32AQ8WU08 396 aa7.36□□□□□ -1.23
TOP2A-203ENST00000577706 DNAJB12Q9NXW2 375 aaKnown RBP7.36□□□□□ -1.23
TOP2A-203ENST00000577706 RGS9O75916 674 aaPredicted RBP7.35□□□□□ -1.23
TOP2A-203ENST00000577706 ATG7O95352 703 aa7.35□□□□□ -1.23
TOP2A-203ENST00000577706 FAM69CQ0P6D2 419 aa7.35□□□□□ -1.23
TOP2A-203ENST00000577706 HIF1AQ16665 826 aa7.35□□□□□ -1.23
TOP2A-203ENST00000577706 PRIMPOLQ96LW4 560 aa7.35□□□□□ -1.23
TOP2A-203ENST00000577706 PNMA5Q96PV4 448 aa7.35□□□□□ -1.23
TOP2A-203ENST00000577706 SSBP4Q9BWG4 385 aaPredicted RBP7.35□□□□□ -1.23
TOP2A-203ENST00000577706 ILDR2Q71H61 639 aa7.34□□□□□ -1.23
TOP2A-203ENST00000577706 PBXIP1Q96AQ6 731 aa7.34□□□□□ -1.23
TOP2A-203ENST00000577706 GSX2Q9BZM3 304 aa7.34□□□□□ -1.23
TOP2A-203ENST00000577706 ACIN1Q9UKV3 1341 aaKnown RBP7.33□□□□□ -1.24
TOP2A-203ENST00000577706 NAGPAQ9UK23 515 aa7.33□□□□□ -1.24
TOP2A-203ENST00000577706 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.33□□□□□ -1.24
TOP2A-203ENST00000577706 PRMT3O60678 531 aa7.32□□□□□ -1.24
TOP2A-203ENST00000577706 CCINQ13939 588 aa7.32□□□□□ -1.24
TOP2A-203ENST00000577706 TMEM164Q5U3C3 297 aa7.32□□□□□ -1.24
TOP2A-203ENST00000577706 MSL1Q68DK7 614 aa7.32□□□□□ -1.24
TOP2A-203ENST00000577706 GOLGA2P5Q9HBQ8 144 aa7.32□□□□□ -1.24
TOP2A-203ENST00000577706 FOXO3O43524 673 aa7.31□□□□□ -1.24
TOP2A-203ENST00000577706 NFKB1P19838 968 aa7.31□□□□□ -1.24
TOP2A-203ENST00000577706 RTN1Q16799 776 aa7.31□□□□□ -1.24
TOP2A-203ENST00000577706 SWI5Q1ZZU3 235 aa7.31□□□□□ -1.24
TOP2A-203ENST00000577706 DTWD1Q8N5C7 304 aa7.31□□□□□ -1.24
TOP2A-203ENST00000577706 WFDC12Q8WWY7 111 aa7.31□□□□□ -1.24
TOP2A-203ENST00000577706 BCS1LQ9Y276 419 aa7.31□□□□□ -1.24
TOP2A-203ENST00000577706 IREB2P48200 963 aaKnown RBP7.3□□□□□ -1.24
TOP2A-203ENST00000577706 FKBP5Q13451 457 aaPredicted RBP7.3□□□□□ -1.24
TOP2A-203ENST00000577706 PCSK7Q16549 785 aa7.3□□□□□ -1.24
TOP2A-203ENST00000577706 OCLNQ16625 522 aa7.3□□□□□ -1.24
TOP2A-203ENST00000577706 FAM35AQ86V20 835 aa7.3□□□□□ -1.24
TOP2A-203ENST00000577706 FBXO11Q86XK2 927 aa7.3□□□□□ -1.24
TOP2A-203ENST00000577706 QTRT2Q9H974 415 aaKnown RBP7.3□□□□□ -1.24
TOP2A-203ENST00000577706 KLK14Q9P0G3 267 aa7.3□□□□□ -1.24
TOP2A-203ENST00000577706 RNF112Q9ULX5 631 aa7.3□□□□□ -1.24
TOP2A-203ENST00000577706 CPB1P15086 417 aa7.29□□□□□ -1.24
TOP2A-203ENST00000577706 IER5Q5VY09 327 aa7.29□□□□□ -1.24
TOP2A-203ENST00000577706 VTI1AQ96AJ9 217 aa7.29□□□□□ -1.24
TOP2A-203ENST00000577706 SLAIN2Q9P270 581 aa7.29□□□□□ -1.24
TOP2A-203ENST00000577706 SUPT5HO00267 1087 aaKnown RBP7.28□□□□□ -1.24
TOP2A-203ENST00000577706 NOS3P29474 1203 aa7.28□□□□□ -1.24
TOP2A-203ENST00000577706 KRTAP19-1Q8IUB9 90 aa7.28□□□□□ -1.24
TOP2A-203ENST00000577706 DMGDHQ9UI17 866 aaKnown RBP7.28□□□□□ -1.24
TOP2A-203ENST00000577706 LRFN2Q9ULH4 789 aa7.28□□□□□ -1.24
TOP2A-203ENST00000577706 TGFBR3LH3BV60 316 aa7.27□□□□□ -1.25
TOP2A-203ENST00000577706 EPB42P16452 691 aa7.27□□□□□ -1.25
TOP2A-203ENST00000577706 DGKZQ13574 1117 aa7.27□□□□□ -1.25
TOP2A-203ENST00000577706 GRIK5Q16478 980 aa7.27□□□□□ -1.25
TOP2A-203ENST00000577706 IGF2-ASQ6U949 168 aa7.27□□□□□ -1.25
TOP2A-203ENST00000577706 CAPN12Q6ZSI9 719 aa7.27□□□□□ -1.25
TOP2A-203ENST00000577706 WFDC8Q8IUA0 241 aa7.27□□□□□ -1.25
TOP2A-203ENST00000577706 LPIN3Q9BQK8 851 aa7.27□□□□□ -1.25
TOP2A-203ENST00000577706 FRRS1LQ9P0K9 344 aa7.27□□□□□ -1.25
TOP2A-203ENST00000577706 MAP3K6O95382 1288 aa7.26□□□□□ -1.25
TOP2A-203ENST00000577706 C11orf91Q3C1V1 193 aa7.26□□□□□ -1.25
TOP2A-203ENST00000577706 COX20Q5RI15 118 aa7.26□□□□□ -1.25
TOP2A-203ENST00000577706 ELMSAN1Q6PJG2 1045 aa7.26□□□□□ -1.25
TOP2A-203ENST00000577706 CLP1Q92989 425 aaKnown RBP7.26□□□□□ -1.25
TOP2A-203ENST00000577706 KRTAP9-9Q9BYP9 154 aa7.26□□□□□ -1.25
TOP2A-203ENST00000577706 KRTAP9-4Q9BYQ2 154 aa7.26□□□□□ -1.25
TOP2A-203ENST00000577706 CXXC1Q9P0U4 656 aaPredicted RBP7.26□□□□□ -1.25
TOP2A-203ENST00000577706 TIMELESSQ9UNS1 1208 aa7.26□□□□□ -1.25
TOP2A-203ENST00000577706 PERM1Q5SV97 790 aa7.25□□□□□ -1.25
TOP2A-203ENST00000577706 MCTP1Q6DN14 999 aa7.25□□□□□ -1.25
TOP2A-203ENST00000577706 PRR23CQ6ZRP0 262 aa7.25□□□□□ -1.25
TOP2A-203ENST00000577706 MYO19Q96H55 970 aa7.25□□□□□ -1.25
TOP2A-203ENST00000577706 MEGF10Q96KG7 1140 aa7.25□□□□□ -1.25
TOP2A-203ENST00000577706 MKNK1Q9BUB5 465 aa7.25□□□□□ -1.25
TOP2A-203ENST00000577706 SAP130Q9H0E3 1048 aa7.25□□□□□ -1.25
TOP2A-203ENST00000577706 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.25□□□□□ -1.25
TOP2A-203ENST00000577706 ZBTB42B2RXF5 422 aa7.24□□□□□ -1.25
TOP2A-203ENST00000577706 GRNP28799 593 aaKnown RBP7.24□□□□□ -1.25
TOP2A-203ENST00000577706 PLAURQ03405 335 aa7.24□□□□□ -1.25
TOP2A-203ENST00000577706 NAA30Q147X3 362 aaPredicted RBP7.24□□□□□ -1.25
TOP2A-203ENST00000577706 DHX32Q7L7V1 743 aaKnown RBP7.24□□□□□ -1.25
TOP2A-203ENST00000577706 KRT25Q7Z3Z0 450 aa7.24□□□□□ -1.25
TOP2A-203ENST00000577706 SLC51AQ86UW1 340 aa7.24□□□□□ -1.25
TOP2A-203ENST00000577706 TRPM4Q8TD43 1214 aa7.24□□□□□ -1.25
TOP2A-203ENST00000577706 TTC9Q92623 222 aa7.24□□□□□ -1.25
TOP2A-203ENST00000577706 PPP1R15AO75807 674 aaPredicted RBP7.23□□□□□ -1.25
TOP2A-203ENST00000577706 MICAL2O94851 1124 aa7.23□□□□□ -1.25
TOP2A-203ENST00000577706 INPP5BP32019 993 aa7.23□□□□□ -1.25
TOP2A-203ENST00000577706 IDH3AP50213 366 aa7.23□□□□□ -1.25
TOP2A-203ENST00000577706 ERICH6Q7L0X2 663 aa7.23□□□□□ -1.25
TOP2A-203ENST00000577706 IFT43Q96FT9 208 aa7.23□□□□□ -1.25
TOP2A-203ENST00000577706 PCMTD2Q9NV79 361 aa7.23□□□□□ -1.25
TOP2A-203ENST00000577706 ZFATQ9P243 1243 aa7.23□□□□□ -1.25
TOP2A-203ENST00000577706 CARNS1A5YM72 827 aa7.22□□□□□ -1.25
TOP2A-203ENST00000577706 OPLAHO14841 1288 aa7.22□□□□□ -1.25
TOP2A-203ENST00000577706 PAX4O43316 350 aa7.22□□□□□ -1.25
TOP2A-203ENST00000577706 ATP2B4P23634 1241 aa7.22□□□□□ -1.25
TOP2A-203ENST00000577706 TARSP26639 723 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms