RNA–Protein interactions for RNA: ENST00000577498.1

IFT20-204, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-204ENST00000577498 RTL9Q8NET4 1388 aa18.61■□□□□ 0.57
IFT20-204ENST00000577498 EYA2O00167 538 aa18.61■□□□□ 0.57
IFT20-204ENST00000577498 IL15P40933 162 aaPredicted RBP18.61■□□□□ 0.57
IFT20-204ENST00000577498 TTC41PQ6P2S7 1318 aa18.6■□□□□ 0.57
IFT20-204ENST00000577498 ANKRD18BA2A2Z9 1011 aa18.6■□□□□ 0.57
IFT20-204ENST00000577498 PHF14O94880 888 aa18.6■□□□□ 0.57
IFT20-204ENST00000577498 SLC10A5Q5PT55 438 aa18.6■□□□□ 0.57
IFT20-204ENST00000577498 SMIM5Q71RC9 77 aa18.6■□□□□ 0.57
IFT20-204ENST00000577498 GPATCH3Q96I76 525 aa18.6■□□□□ 0.57
IFT20-204ENST00000577498 IFIT2P09913 472 aaKnown RBP18.59■□□□□ 0.57
IFT20-204ENST00000577498 GSPT1P15170 499 aaKnown RBP18.59■□□□□ 0.57
IFT20-204ENST00000577498 ATG9AQ7Z3C6 839 aa18.59■□□□□ 0.57
IFT20-204ENST00000577498 AKT1S1Q96B36 256 aa18.59■□□□□ 0.57
IFT20-204ENST00000577498 GPR108Q9NPR9 543 aa18.59■□□□□ 0.57
IFT20-204ENST00000577498 DDX60Q8IY21 1712 aaKnown RBP18.59■□□□□ 0.57
IFT20-204ENST00000577498 FAM177BA6PVY3 158 aa18.58■□□□□ 0.56
IFT20-204ENST00000577498 EIF5BO60841 1220 aaKnown RBP18.58■□□□□ 0.56
IFT20-204ENST00000577498 HCLS1P14317 486 aaPredicted RBP18.58■□□□□ 0.56
IFT20-204ENST00000577498 ITGA6P23229 1130 aa18.58■□□□□ 0.56
IFT20-204ENST00000577498 CCDC152Q4G0S7 254 aa18.58■□□□□ 0.56
IFT20-204ENST00000577498 TAF7LQ5H9L4 462 aa18.58■□□□□ 0.56
IFT20-204ENST00000577498 AACSQ86V21 672 aa18.58■□□□□ 0.56
IFT20-204ENST00000577498 NUTM1Q86Y26 1132 aa18.58■□□□□ 0.56
IFT20-204ENST00000577498 FLAD1Q8NFF5 587 aa18.58■□□□□ 0.56
IFT20-204ENST00000577498 BCL11AQ9H165 835 aa18.58■□□□□ 0.56
IFT20-204ENST00000577498 GREM2Q9H772 168 aa18.58■□□□□ 0.56
IFT20-204ENST00000577498 CARMIL3Q8ND23 1372 aa18.57■□□□□ 0.56
IFT20-204ENST00000577498 CDC45O75419 566 aa18.57■□□□□ 0.56
IFT20-204ENST00000577498 TFCP2Q12800 502 aa18.57■□□□□ 0.56
IFT20-204ENST00000577498 TPTE2Q6XPS3 522 aa18.57■□□□□ 0.56
IFT20-204ENST00000577498 BICDL1Q6ZP65 573 aa18.57■□□□□ 0.56
IFT20-204ENST00000577498 ILDR2Q71H61 639 aa18.57■□□□□ 0.56
IFT20-204ENST00000577498 NBPF5PQ86XG9 351 aaPredicted RBP18.57■□□□□ 0.56
IFT20-204ENST00000577498 EAF2Q96CJ1 260 aaPredicted RBP18.57■□□□□ 0.56
IFT20-204ENST00000577498 ERC2O15083 957 aa18.56■□□□□ 0.56
IFT20-204ENST00000577498 ERFEQ4G0M1 354 aa18.56■□□□□ 0.56
IFT20-204ENST00000577498 TNNI3KQ59H18 835 aa18.56■□□□□ 0.56
IFT20-204ENST00000577498 ZNF594Q96JF6 807 aaPredicted RBP18.56■□□□□ 0.56
IFT20-204ENST00000577498 ECHDC1Q9NTX5 307 aa18.56■□□□□ 0.56
IFT20-204ENST00000577498 FPGT-TNNI3KV9GXZ4 949 aa18.56■□□□□ 0.56
IFT20-204ENST00000577498 LRP5O75197 1615 aa18.56■□□□□ 0.56
IFT20-204ENST00000577498 GLRX3O76003 335 aaKnown RBP18.55■□□□□ 0.56
IFT20-204ENST00000577498 GYS1P13807 737 aa18.55■□□□□ 0.56
IFT20-204ENST00000577498 SDSP20132 328 aa18.55■□□□□ 0.56
IFT20-204ENST00000577498 GTF2E1P29083 439 aaPredicted RBP18.55■□□□□ 0.56
IFT20-204ENST00000577498 NFIXQ14938 502 aa18.55■□□□□ 0.56
IFT20-204ENST00000577498 SF3B3Q15393 1217 aaKnown RBP18.55■□□□□ 0.56
IFT20-204ENST00000577498 ZNF827Q17R98 1081 aa18.55■□□□□ 0.56
IFT20-204ENST00000577498 PI4K2BQ8TCG2 481 aa18.55■□□□□ 0.56
IFT20-204ENST00000577498 CAMKK2Q96RR4 588 aa18.55■□□□□ 0.56
IFT20-204ENST00000577498 TFCP2L1Q9NZI6 479 aa18.55■□□□□ 0.56
IFT20-204ENST00000577498 LRRC24Q50LG9 513 aa18.54■□□□□ 0.56
IFT20-204ENST00000577498 CCDC85AQ96PX6 553 aaPredicted RBP18.54■□□□□ 0.56
IFT20-204ENST00000577498 CEP126Q9P2H0 1117 aa18.54■□□□□ 0.56
IFT20-204ENST00000577498 RIC1Q4ADV7 1423 aa18.54■□□□□ 0.56
IFT20-204ENST00000577498 TUBGCP6Q96RT7 1819 aa18.53■□□□□ 0.56
IFT20-204ENST00000577498 PUS3Q9BZE2 481 aaKnown RBP18.53■□□□□ 0.56
IFT20-204ENST00000577498 AKAP2Q9Y2D5 859 aa18.53■□□□□ 0.56
IFT20-204ENST00000577498 RIPOR2Q9Y4F9 1068 aa18.53■□□□□ 0.56
IFT20-204ENST00000577498 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.53■□□□□ 0.56
IFT20-204ENST00000577498 ZNF609O15014 1411 aa18.52■□□□□ 0.56
IFT20-204ENST00000577498 TM4SF1P30408 202 aa18.52■□□□□ 0.56
IFT20-204ENST00000577498 SF3B2Q13435 895 aaKnown RBP18.52■□□□□ 0.56
IFT20-204ENST00000577498 TSHZ3Q63HK5 1081 aa18.52■□□□□ 0.56
IFT20-204ENST00000577498 LDHAL6AQ6ZMR3 332 aa18.52■□□□□ 0.56
IFT20-204ENST00000577498 ABCC12Q96J65 1359 aa18.52■□□□□ 0.55
IFT20-204ENST00000577498 BAG6P46379 1132 aa18.51■□□□□ 0.55
IFT20-204ENST00000577498 CASC1Q6TDU7 716 aa18.51■□□□□ 0.55
IFT20-204ENST00000577498 TBC1D9Q6ZT07 1266 aa18.51■□□□□ 0.55
IFT20-204ENST00000577498 CDC5LQ99459 802 aaKnown RBP18.51■□□□□ 0.55
IFT20-204ENST00000577498 CCDC8Q9H0W5 538 aaPredicted RBP18.51■□□□□ 0.55
IFT20-204ENST00000577498 UPF2Q9HAU5 1272 aaKnown RBP18.51■□□□□ 0.55
IFT20-204ENST00000577498 CNNM1Q9NRU3 951 aa18.51■□□□□ 0.55
IFT20-204ENST00000577498 EP400Q96L91 3159 aa18.5■□□□□ 0.55
IFT20-204ENST00000577498 NLGN1Q8N2Q7 840 aa18.5■□□□□ 0.55
IFT20-204ENST00000577498 CNBD1Q8NA66 436 aa18.5■□□□□ 0.55
IFT20-204ENST00000577498 NLRP3Q96P20 1036 aa18.5■□□□□ 0.55
IFT20-204ENST00000577498 DBNLQ9UJU6 430 aaKnown RBP18.5■□□□□ 0.55
IFT20-204ENST00000577498 MROH5Q6ZUA9 1318 aa18.49■□□□□ 0.55
IFT20-204ENST00000577498 ATP5JP18859 108 aa18.49■□□□□ 0.55
IFT20-204ENST00000577498 IGHMBP2P38935 993 aaKnown RBP18.49■□□□□ 0.55
IFT20-204ENST00000577498 EN1Q05925 392 aaPredicted RBP18.49■□□□□ 0.55
IFT20-204ENST00000577498 EZH2Q15910 746 aaKnown RBP18.49■□□□□ 0.55
IFT20-204ENST00000577498 METTL24Q5JXM2 366 aa18.49■□□□□ 0.55
IFT20-204ENST00000577498 COL23A1Q86Y22 540 aaPredicted RBP18.49■□□□□ 0.55
IFT20-204ENST00000577498 CCDC125Q86Z20 511 aa18.49■□□□□ 0.55
IFT20-204ENST00000577498 CNTROBQ8N137 903 aa18.49■□□□□ 0.55
IFT20-204ENST00000577498 MPHOSPH8Q99549 860 aa18.49■□□□□ 0.55
IFT20-204ENST00000577498 TRIM6-TRIM34B2RNG4 842 aa18.48■□□□□ 0.55
IFT20-204ENST00000577498 SEC24BO95487 1268 aa18.48■□□□□ 0.55
IFT20-204ENST00000577498 C3orf67Q6ZVT6 689 aa18.48■□□□□ 0.55
IFT20-204ENST00000577498 SEC31BQ9NQW1 1179 aa18.48■□□□□ 0.55
IFT20-204ENST00000577498 STK32BQ9NY57 414 aa18.48■□□□□ 0.55
IFT20-204ENST00000577498 TLR7Q9NYK1 1049 aaKnown RBP18.48■□□□□ 0.55
IFT20-204ENST00000577498 PNPLA7Q6ZV29 1317 aa18.48■□□□□ 0.55
IFT20-204ENST00000577498 QSER1Q2KHR3 1735 aa18.47■□□□□ 0.55
IFT20-204ENST00000577498 A0A1B0GUL7 405 aa18.47■□□□□ 0.55
IFT20-204ENST00000577498 NPHP1O15259 732 aa18.47■□□□□ 0.55
IFT20-204ENST00000577498 VGLL2Q8N8G2 317 aa18.47■□□□□ 0.55
IFT20-204ENST00000577498 DBNDD2Q9BQY9 259 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms