RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 CCT4P50991 539 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-203ENST00000577442 CTSWP56202 376 aa16.06■□□□□ 0.16
CDK5RAP3-203ENST00000577442 GRAPQ13588 217 aa16.06■□□□□ 0.16
CDK5RAP3-203ENST00000577442 GRIPAP1Q4V328 841 aa16.06■□□□□ 0.16
CDK5RAP3-203ENST00000577442 GRAPLQ8TC17 118 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-203ENST00000577442 JARID2Q92833 1246 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-203ENST00000577442 ZNF219Q9P2Y4 722 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-203ENST00000577442 CASP7P55210 303 aa16.05■□□□□ 0.16
CDK5RAP3-203ENST00000577442 RTKN2Q8IZC4 609 aa16.05■□□□□ 0.16
CDK5RAP3-203ENST00000577442 C7orf43Q8WVR3 580 aa16.05■□□□□ 0.16
CDK5RAP3-203ENST00000577442 RTL9Q8NET4 1388 aa16.04■□□□□ 0.16
CDK5RAP3-203ENST00000577442 SBF1O95248 1867 aa16.04■□□□□ 0.16
CDK5RAP3-203ENST00000577442 LTBP3Q9NS15 1303 aa16.04■□□□□ 0.16
CDK5RAP3-203ENST00000577442 BCAR3O75815 825 aa16.04■□□□□ 0.16
CDK5RAP3-203ENST00000577442 FRAT1Q92837 279 aaPredicted RBP16.04■□□□□ 0.16
CDK5RAP3-203ENST00000577442 YTHDC1Q96MU7 727 aaKnown RBP16.04■□□□□ 0.16
CDK5RAP3-203ENST00000577442 TAOK3Q9H2K8 898 aa16.04■□□□□ 0.16
CDK5RAP3-203ENST00000577442 YY1P25490 414 aa16.03■□□□□ 0.16
CDK5RAP3-203ENST00000577442 ZKSCAN2Q63HK3 967 aa16.03■□□□□ 0.16
CDK5RAP3-203ENST00000577442 ATF7IPQ6VMQ6 1270 aa16.03■□□□□ 0.16
CDK5RAP3-203ENST00000577442 CDC5LQ99459 802 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-203ENST00000577442 ATP6V0A2Q9Y487 856 aa16.03■□□□□ 0.16
CDK5RAP3-203ENST00000577442 TAF1P21675 1872 aa16.03■□□□□ 0.16
CDK5RAP3-203ENST00000577442 UTYO14607 1347 aa16.02■□□□□ 0.16
CDK5RAP3-203ENST00000577442 CCDC88AQ3V6T2 1871 aa16.02■□□□□ 0.16
CDK5RAP3-203ENST00000577442 NFKBIEO00221 500 aa16.02■□□□□ 0.16
CDK5RAP3-203ENST00000577442 LMNB1P20700 586 aa16.02■□□□□ 0.16
CDK5RAP3-203ENST00000577442 RASSF7Q02833 373 aa16.02■□□□□ 0.16
CDK5RAP3-203ENST00000577442 TTLL11Q8NHH1 800 aa16.02■□□□□ 0.16
CDK5RAP3-203ENST00000577442 TRIM27P14373 513 aa16.01■□□□□ 0.15
CDK5RAP3-203ENST00000577442 RPS8P62241 208 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP3-203ENST00000577442 FKBP4Q02790 459 aaKnown RBP eCLIP16.01■□□□□ 0.15
CDK5RAP3-203ENST00000577442 HDAC5Q9UQL6 1122 aa16.01■□□□□ 0.15
CDK5RAP3-203ENST00000577442 LRRC37AA6NMS7 1700 aa16.01■□□□□ 0.15
CDK5RAP3-203ENST00000577442 ZC3H4Q9UPT8 1303 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-203ENST00000577442 DICER1Q9UPY3 1922 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-203ENST00000577442 C9orf131Q5VYM1 1079 aa16■□□□□ 0.15
CDK5RAP3-203ENST00000577442 ANKRD18AQ8IVF6 992 aa16■□□□□ 0.15
CDK5RAP3-203ENST00000577442 SP8Q8IXZ3 490 aa16■□□□□ 0.15
CDK5RAP3-203ENST00000577442 FTSJ3Q8IY81 847 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-203ENST00000577442 CELF1Q92879 486 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-203ENST00000577442 CCDC85AQ96PX6 553 aaPredicted RBP16■□□□□ 0.15
CDK5RAP3-203ENST00000577442 PSMD1Q99460 953 aa16■□□□□ 0.15
CDK5RAP3-203ENST00000577442 RNF181Q9P0P0 153 aa16■□□□□ 0.15
CDK5RAP3-203ENST00000577442 RCAN3Q9UKA8 241 aa16■□□□□ 0.15
CDK5RAP3-203ENST00000577442 CSF1RP07333 972 aa15.99■□□□□ 0.15
CDK5RAP3-203ENST00000577442 FAM161AQ3B820 660 aa15.99■□□□□ 0.15
CDK5RAP3-203ENST00000577442 INTS3Q68E01 1043 aaKnown RBP15.99■□□□□ 0.15
CDK5RAP3-203ENST00000577442 GREM2Q9H772 168 aa15.99■□□□□ 0.15
CDK5RAP3-203ENST00000577442 SEC31BQ9NQW1 1179 aa15.99■□□□□ 0.15
CDK5RAP3-203ENST00000577442 SNED1Q8TER0 1413 aa15.99■□□□□ 0.15
CDK5RAP3-203ENST00000577442 NBPF7P0C2Y1 421 aaPredicted RBP15.98■□□□□ 0.15
CDK5RAP3-203ENST00000577442 MS4A1P11836 297 aa15.98■□□□□ 0.15
CDK5RAP3-203ENST00000577442 IGHMBP2P38935 993 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-203ENST00000577442 OLFM4Q6UX06 510 aa15.98■□□□□ 0.15
CDK5RAP3-203ENST00000577442 SUPT20HQ8NEM7 779 aa15.98■□□□□ 0.15
CDK5RAP3-203ENST00000577442 USP44Q9H0E7 712 aa15.98■□□□□ 0.15
CDK5RAP3-203ENST00000577442 CHMP3Q9Y3E7 222 aa15.98■□□□□ 0.15
CDK5RAP3-203ENST00000577442 TIAM2Q8IVF5 1701 aa15.97■□□□□ 0.15
CDK5RAP3-203ENST00000577442 SPEF2Q9C093 1822 aa15.97■□□□□ 0.15
CDK5RAP3-203ENST00000577442 ANKRD18BA2A2Z9 1011 aa15.97■□□□□ 0.15
CDK5RAP3-203ENST00000577442 UBTFL1P0CB47 393 aaPredicted RBP15.97■□□□□ 0.15
CDK5RAP3-203ENST00000577442 ITGA6P23229 1130 aa15.97■□□□□ 0.15
CDK5RAP3-203ENST00000577442 FOXO4P98177 505 aa15.97■□□□□ 0.15
CDK5RAP3-203ENST00000577442 IFIT5Q13325 482 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-203ENST00000577442 LMBR1LQ6UX01 489 aa15.97■□□□□ 0.15
CDK5RAP3-203ENST00000577442 DPP8Q6V1X1 898 aaPredicted RBP15.97■□□□□ 0.15
CDK5RAP3-203ENST00000577442 MPNDQ8N594 471 aa15.97■□□□□ 0.15
CDK5RAP3-203ENST00000577442 SUCLG2Q96I99 432 aa15.97■□□□□ 0.15
CDK5RAP3-203ENST00000577442 GNAI3P08754 354 aa15.96■□□□□ 0.15
CDK5RAP3-203ENST00000577442 CLUAP1Q96AJ1 413 aa15.96■□□□□ 0.15
CDK5RAP3-203ENST00000577442 COL4A1P02462 1669 aa15.95■□□□□ 0.14
CDK5RAP3-203ENST00000577442 IARSP41252 1262 aaKnown RBP15.95■□□□□ 0.14
CDK5RAP3-203ENST00000577442 CCDC57Q2TAC2 916 aa15.95■□□□□ 0.14
CDK5RAP3-203ENST00000577442 RABL6Q3YEC7 729 aaPredicted RBP15.95■□□□□ 0.14
CDK5RAP3-203ENST00000577442 TAF7LQ5H9L4 462 aa15.95■□□□□ 0.14
CDK5RAP3-203ENST00000577442 EPHA10Q5JZY3 1008 aa15.95■□□□□ 0.14
CDK5RAP3-203ENST00000577442 DZIP1LQ8IYY4 767 aaKnown RBP15.95■□□□□ 0.14
CDK5RAP3-203ENST00000577442 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.95■□□□□ 0.14
CDK5RAP3-203ENST00000577442 MPHOSPH8Q99549 860 aa15.95■□□□□ 0.14
CDK5RAP3-203ENST00000577442 RTFDC1Q9BY42 306 aaPredicted RBP15.95■□□□□ 0.14
CDK5RAP3-203ENST00000577442 BICC1Q9H694 974 aaKnown RBP15.95■□□□□ 0.14
CDK5RAP3-203ENST00000577442 ZNF277Q9NRM2 450 aaPredicted RBP15.95■□□□□ 0.14
CDK5RAP3-203ENST00000577442 BSDC1Q9NW68 430 aaPredicted RBP15.95■□□□□ 0.14
CDK5RAP3-203ENST00000577442 VPS33BQ9H267 617 aa15.94■□□□□ 0.14
CDK5RAP3-203ENST00000577442 PRELPP51888 382 aa15.93■□□□□ 0.14
CDK5RAP3-203ENST00000577442 TMEM57Q8N5G2 664 aa15.93■□□□□ 0.14
CDK5RAP3-203ENST00000577442 KAZALD1Q96I82 304 aa15.93■□□□□ 0.14
CDK5RAP3-203ENST00000577442 MEIS3Q99687 375 aa15.93■□□□□ 0.14
CDK5RAP3-203ENST00000577442 PODXL2Q9NZ53 605 aa15.93■□□□□ 0.14
CDK5RAP3-203ENST00000577442 ANKIB1Q9P2G1 1089 aa15.93■□□□□ 0.14
CDK5RAP3-203ENST00000577442 NSFL1CQ9UNZ2 370 aaKnown RBP15.93■□□□□ 0.14
CDK5RAP3-203ENST00000577442 TNNQ9UQP3 1299 aa15.93■□□□□ 0.14
CDK5RAP3-203ENST00000577442 LTBP1Q14766 1721 aa15.93■□□□□ 0.14
CDK5RAP3-203ENST00000577442 XDHP47989 1333 aa15.93■□□□□ 0.14
CDK5RAP3-203ENST00000577442 PPIP5K2O43314 1243 aa15.92■□□□□ 0.14
CDK5RAP3-203ENST00000577442 SLC51AQ86UW1 340 aa15.92■□□□□ 0.14
CDK5RAP3-203ENST00000577442 ITPRIPQ8IWB1 547 aa15.92■□□□□ 0.14
CDK5RAP3-203ENST00000577442 LARGE2Q8N3Y3 721 aa15.92■□□□□ 0.14
CDK5RAP3-203ENST00000577442 ANKRD44Q8N8A2 993 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms