RNA–Protein interactions for RNA: ENST00000575643.1

PSMB6-204, Transcript of proteasome subunit beta 6, humanhuman

TSL 2

Gene PSMB6, Length 666 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB6-204ENST00000575643 MRS2Q9HD23 443 aa17.13■□□□□ 0.33
PSMB6-204ENST00000575643 DPP8Q6V1X1 898 aaPredicted RBP17.12■□□□□ 0.33
PSMB6-204ENST00000575643 RIC3Q7Z5B4 369 aa17.12■□□□□ 0.33
PSMB6-204ENST00000575643 CELF1Q92879 486 aaKnown RBP17.12■□□□□ 0.33
PSMB6-204ENST00000575643 MYD88Q99836 296 aa17.12■□□□□ 0.33
PSMB6-204ENST00000575643 ZNF316A6NFI3 1004 aaPredicted RBP17.11■□□□□ 0.33
PSMB6-204ENST00000575643 IRS4O14654 1257 aaPredicted RBP17.11■□□□□ 0.33
PSMB6-204ENST00000575643 WWC1Q8IX03 1113 aa17.11■□□□□ 0.33
PSMB6-204ENST00000575643 SP8Q8IXZ3 490 aa17.11■□□□□ 0.33
PSMB6-204ENST00000575643 CREBZFQ9NS37 354 aa17.11■□□□□ 0.33
PSMB6-204ENST00000575643 BBOX1O75936 387 aa17.1■□□□□ 0.33
PSMB6-204ENST00000575643 EPS15P42566 896 aa17.1■□□□□ 0.33
PSMB6-204ENST00000575643 TRIM28Q13263 835 aaKnown RBP17.1■□□□□ 0.33
PSMB6-204ENST00000575643 CCDC27Q2M243 656 aa17.1■□□□□ 0.33
PSMB6-204ENST00000575643 MAP1SQ66K74 1059 aaPredicted RBP17.1■□□□□ 0.33
PSMB6-204ENST00000575643 MPNDQ8N594 471 aa17.1■□□□□ 0.33
PSMB6-204ENST00000575643 TMX4Q9H1E5 349 aaPredicted RBP17.1■□□□□ 0.33
PSMB6-204ENST00000575643 MKRN1Q9UHC7 482 aaKnown RBP17.1■□□□□ 0.33
PSMB6-204ENST00000575643 ITGBL1O95965 494 aaPredicted RBP17.09■□□□□ 0.33
PSMB6-204ENST00000575643 KIAA2012Q0VF49 1180 aa17.09■□□□□ 0.33
PSMB6-204ENST00000575643 SF3B3Q15393 1217 aaKnown RBP17.09■□□□□ 0.33
PSMB6-204ENST00000575643 CCDC30Q5VVM6 783 aa17.09■□□□□ 0.33
PSMB6-204ENST00000575643 JARID2Q92833 1246 aaPredicted RBP17.09■□□□□ 0.33
PSMB6-204ENST00000575643 CLEC11AQ9Y240 323 aa17.09■□□□□ 0.33
PSMB6-204ENST00000575643 TRPM7Q96QT4 1865 aa17.09■□□□□ 0.33
PSMB6-204ENST00000575643 SCN9AQ15858 1988 aa17.09■□□□□ 0.33
PSMB6-204ENST00000575643 CNTNAP1P78357 1384 aa17.08■□□□□ 0.32
PSMB6-204ENST00000575643 FANCIQ9NVI1 1328 aa17.08■□□□□ 0.32
PSMB6-204ENST00000575643 YDJCA8MPS7 323 aa17.08■□□□□ 0.32
PSMB6-204ENST00000575643 ANP32CO43423 234 aa17.08■□□□□ 0.32
PSMB6-204ENST00000575643 LMOD1P29536 600 aaPredicted RBP17.08■□□□□ 0.32
PSMB6-204ENST00000575643 IFFO2Q5TF58 517 aa17.08■□□□□ 0.32
PSMB6-204ENST00000575643 ZBTB38Q8NAP3 1195 aaPredicted RBP17.08■□□□□ 0.32
PSMB6-204ENST00000575643 SUPT20HQ8NEM7 779 aa17.08■□□□□ 0.32
PSMB6-204ENST00000575643 GPR101Q96P66 508 aaPredicted RBP17.08■□□□□ 0.32
PSMB6-204ENST00000575643 CXCL9Q07325 125 aa17.07■□□□□ 0.32
PSMB6-204ENST00000575643 PNMA8AQ86V59 439 aaPredicted RBP17.07■□□□□ 0.32
PSMB6-204ENST00000575643 METTL22Q9BUU2 404 aaPredicted RBP17.07■□□□□ 0.32
PSMB6-204ENST00000575643 SEC31BQ9NQW1 1179 aa17.07■□□□□ 0.32
PSMB6-204ENST00000575643 ZNRF3Q9ULT6 936 aa17.07■□□□□ 0.32
PSMB6-204ENST00000575643 MAP3K2Q9Y2U5 619 aa17.07■□□□□ 0.32
PSMB6-204ENST00000575643 PSME4Q14997 1843 aa17.07■□□□□ 0.32
PSMB6-204ENST00000575643 THSD7BQ9C0I4 1608 aa17.07■□□□□ 0.32
PSMB6-204ENST00000575643 RAD17O75943 681 aa17.06■□□□□ 0.32
PSMB6-204ENST00000575643 HSPA1AP0DMV8 641 aaKnown RBP17.06■□□□□ 0.32
PSMB6-204ENST00000575643 HSPA1BP0DMV9 641 aaKnown RBP17.06■□□□□ 0.32
PSMB6-204ENST00000575643 GPSM2P81274 684 aa17.06■□□□□ 0.32
PSMB6-204ENST00000575643 FMR1Q06787 632 aaKnown RBP eCLIP17.06■□□□□ 0.32
PSMB6-204ENST00000575643 TWISTNBQ3B726 338 aaPredicted RBP17.06■□□□□ 0.32
PSMB6-204ENST00000575643 G2E3Q7L622 706 aa17.06■□□□□ 0.32
PSMB6-204ENST00000575643 TMC4Q7Z404 712 aa17.06■□□□□ 0.32
PSMB6-204ENST00000575643 CCDC191Q8NCU4 936 aa17.06■□□□□ 0.32
PSMB6-204ENST00000575643 CCDC85AQ96PX6 553 aaPredicted RBP17.06■□□□□ 0.32
PSMB6-204ENST00000575643 VPS33BQ9H267 617 aa17.06■□□□□ 0.32
PSMB6-204ENST00000575643 CWC25Q9NXE8 425 aaPredicted RBP17.06■□□□□ 0.32
PSMB6-204ENST00000575643 GPRC5DQ9NZD1 345 aa17.06■□□□□ 0.32
PSMB6-204ENST00000575643 SALL2Q9Y467 1007 aaPredicted RBP17.06■□□□□ 0.32
PSMB6-204ENST00000575643 IL16Q14005 1332 aa17.05■□□□□ 0.32
PSMB6-204ENST00000575643 SHTN1A0MZ66 631 aa17.05■□□□□ 0.32
PSMB6-204ENST00000575643 PCCAP05165 728 aaPredicted RBP17.05■□□□□ 0.32
PSMB6-204ENST00000575643 IGKV5-2P06315 115 aa17.05■□□□□ 0.32
PSMB6-204ENST00000575643 GMPSP49915 693 aaPredicted RBP17.05■□□□□ 0.32
PSMB6-204ENST00000575643 CNTROBQ8N137 903 aa17.05■□□□□ 0.32
PSMB6-204ENST00000575643 CACNA1FO60840 1977 aa17.05■□□□□ 0.32
PSMB6-204ENST00000575643 ZNF646O15015 1829 aaPredicted RBP17.05■□□□□ 0.32
PSMB6-204ENST00000575643 PI4KAP2A4QPH2 592 aa17.04■□□□□ 0.32
PSMB6-204ENST00000575643 TMEM88BA6NKF7 163 aa17.04■□□□□ 0.32
PSMB6-204ENST00000575643 DDX58O95786 925 aaKnown RBP17.04■□□□□ 0.32
PSMB6-204ENST00000575643 CIAPIN1Q6FI81 312 aa17.04■□□□□ 0.32
PSMB6-204ENST00000575643 PI4KAP1Q8N8J0 262 aa17.04■□□□□ 0.32
PSMB6-204ENST00000575643 POLLQ9UGP5 575 aa17.04■□□□□ 0.32
PSMB6-204ENST00000575643 NSFL1CQ9UNZ2 370 aaKnown RBP17.04■□□□□ 0.32
PSMB6-204ENST00000575643 A0A1B0GUL6 1792 aa17.04■□□□□ 0.32
PSMB6-204ENST00000575643 CWF19L2Q2TBE0 894 aaKnown RBP17.03■□□□□ 0.32
PSMB6-204ENST00000575643 STK31Q9BXU1 1019 aa17.03■□□□□ 0.32
PSMB6-204ENST00000575643 DBNDD1Q9H9R9 158 aa17.03■□□□□ 0.32
PSMB6-204ENST00000575643 CDHR2Q9BYE9 1310 aa17.02■□□□□ 0.32
PSMB6-204ENST00000575643 TRAF5O00463 557 aa17.02■□□□□ 0.32
PSMB6-204ENST00000575643 RIMBP2O15034 1052 aa17.02■□□□□ 0.32
PSMB6-204ENST00000575643 PDE8AO60658 829 aa17.02■□□□□ 0.32
PSMB6-204ENST00000575643 COL13A1Q5TAT6 717 aaPredicted RBP17.02■□□□□ 0.32
PSMB6-204ENST00000575643 KSR2Q6VAB6 950 aa17.02■□□□□ 0.32
PSMB6-204ENST00000575643 TRPM4Q8TD43 1214 aa17.02■□□□□ 0.32
PSMB6-204ENST00000575643 RTL9Q8NET4 1388 aa17.02■□□□□ 0.31
PSMB6-204ENST00000575643 C6orf229H3BNL8 230 aa17.01■□□□□ 0.31
PSMB6-204ENST00000575643 CTSWP56202 376 aa17.01■□□□□ 0.31
PSMB6-204ENST00000575643 RPS8P62241 208 aaKnown RBP17.01■□□□□ 0.31
PSMB6-204ENST00000575643 WASHC4Q2M389 1173 aa17.01■□□□□ 0.31
PSMB6-204ENST00000575643 CCDC152Q4G0S7 254 aa17.01■□□□□ 0.31
PSMB6-204ENST00000575643 USP50Q70EL3 339 aaPredicted RBP17.01■□□□□ 0.31
PSMB6-204ENST00000575643 TBC1D16Q8TBP0 767 aa17.01■□□□□ 0.31
PSMB6-204ENST00000575643 SPINK5Q9NQ38 1064 aaPredicted RBP17.01■□□□□ 0.31
PSMB6-204ENST00000575643 ADARB2Q9NS39 739 aaKnown RBP17.01■□□□□ 0.31
PSMB6-204ENST00000575643 NEURL1BA8MQ27 555 aa17■□□□□ 0.31
PSMB6-204ENST00000575643 PSMD14O00487 310 aa17■□□□□ 0.31
PSMB6-204ENST00000575643 ECE2O60344 883 aa17■□□□□ 0.31
PSMB6-204ENST00000575643 UFL1O94874 794 aa17■□□□□ 0.31
PSMB6-204ENST00000575643 SLC4A2P04920 1241 aa17■□□□□ 0.31
PSMB6-204ENST00000575643 FLIIQ13045 1269 aa17■□□□□ 0.31
PSMB6-204ENST00000575643 ZBTB12Q9Y330 459 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms