RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.89■□□□□ 0.29
SMG6-215ENST00000574501 CCDC61Q9Y6R9 512 aa16.89■□□□□ 0.29
SMG6-215ENST00000574501 MAP3K5Q99683 1374 aa16.88■□□□□ 0.29
SMG6-215ENST00000574501 IFIT2P09913 472 aaKnown RBP16.88■□□□□ 0.29
SMG6-215ENST00000574501 PSMA5P28066 241 aa16.88■□□□□ 0.29
SMG6-215ENST00000574501 RESTQ13127 1097 aa16.88■□□□□ 0.29
SMG6-215ENST00000574501 TXNDC2Q86VQ3 553 aa16.88■□□□□ 0.29
SMG6-215ENST00000574501 BRF1Q92994 677 aa16.88■□□□□ 0.29
SMG6-215ENST00000574501 TTC41PQ6P2S7 1318 aa16.88■□□□□ 0.29
SMG6-215ENST00000574501 H3BQV1 296 aa16.88■□□□□ 0.29
SMG6-215ENST00000574501 IFFO2Q5TF58 517 aa16.88■□□□□ 0.29
SMG6-215ENST00000574501 MAP4K1Q92918 833 aa16.88■□□□□ 0.29
SMG6-215ENST00000574501 RIMS1Q86UR5 1692 aaKnown RBP16.88■□□□□ 0.29
SMG6-215ENST00000574501 NMIQ13287 307 aaPredicted RBP16.87■□□□□ 0.29
SMG6-215ENST00000574501 TEX35Q5T0J7 233 aa16.87■□□□□ 0.29
SMG6-215ENST00000574501 TMCO3Q6UWJ1 677 aa16.87■□□□□ 0.29
SMG6-215ENST00000574501 DIP2CQ9Y2E4 1556 aa16.87■□□□□ 0.29
SMG6-215ENST00000574501 ZRANB2O95218 330 aaKnown RBP eCLIP16.87■□□□□ 0.29
SMG6-215ENST00000574501 RPS6KB1P23443 525 aa16.87■□□□□ 0.29
SMG6-215ENST00000574501 KRBA2Q6ZNG9 492 aa16.87■□□□□ 0.29
SMG6-215ENST00000574501 NFATC2IPQ8NCF5 419 aa16.87■□□□□ 0.29
SMG6-215ENST00000574501 KCND1Q9NSA2 647 aa16.87■□□□□ 0.29
SMG6-215ENST00000574501 ECHDC1Q9NTX5 307 aa16.87■□□□□ 0.29
SMG6-215ENST00000574501 NRKQ7Z2Y5 1582 aa16.86■□□□□ 0.29
SMG6-215ENST00000574501 DLC1Q96QB1 1528 aa16.86■□□□□ 0.29
SMG6-215ENST00000574501 GSDMDP57764 484 aa16.86■□□□□ 0.29
SMG6-215ENST00000574501 ARMCX5Q6P1M9 558 aa16.86■□□□□ 0.29
SMG6-215ENST00000574501 HOMER1Q86YM7 354 aa16.86■□□□□ 0.29
SMG6-215ENST00000574501 CLASRPQ8N2M8 674 aaKnown RBP16.86■□□□□ 0.29
SMG6-215ENST00000574501 SMARCE1Q969G3 411 aa16.86■□□□□ 0.29
SMG6-215ENST00000574501 TSPYL1Q9H0U9 437 aa16.86■□□□□ 0.29
SMG6-215ENST00000574501 ANKRD1Q15327 319 aa16.86■□□□□ 0.29
SMG6-215ENST00000574501 TMC6Q7Z403 805 aa16.86■□□□□ 0.29
SMG6-215ENST00000574501 UBXN4Q92575 508 aa16.86■□□□□ 0.29
SMG6-215ENST00000574501 EPC1Q9H2F5 836 aa16.86■□□□□ 0.29
SMG6-215ENST00000574501 ADGRL3Q9HAR2 1447 aa16.86■□□□□ 0.29
SMG6-215ENST00000574501 USP42Q9H9J4 1324 aaKnown RBP16.85■□□□□ 0.29
SMG6-215ENST00000574501 SMC2O95347 1197 aa16.85■□□□□ 0.29
SMG6-215ENST00000574501 ANO10Q9NW15 660 aa16.85■□□□□ 0.29
SMG6-215ENST00000574501 ORC3Q9UBD5 711 aaPredicted RBP16.85■□□□□ 0.29
SMG6-215ENST00000574501 DNAI1Q9UI46 699 aa16.85■□□□□ 0.29
SMG6-215ENST00000574501 CFAP45Q9UL16 551 aa16.85■□□□□ 0.29
SMG6-215ENST00000574501 EVI5LQ96CN4 794 aa16.85■□□□□ 0.29
SMG6-215ENST00000574501 PA2G4Q9UQ80 394 aaKnown RBP16.85■□□□□ 0.29
SMG6-215ENST00000574501 A0A0D9SFI3 127 aa16.84■□□□□ 0.29
SMG6-215ENST00000574501 NUTM2FA1L443 756 aa16.84■□□□□ 0.29
SMG6-215ENST00000574501 TPM4P67936 248 aa16.84■□□□□ 0.29
SMG6-215ENST00000574501 HDGFL1Q5TGJ6 251 aa16.84■□□□□ 0.29
SMG6-215ENST00000574501 CEP57L1Q8IYX8 460 aa16.84■□□□□ 0.29
SMG6-215ENST00000574501 ZBTB9Q96C00 473 aa16.84■□□□□ 0.29
SMG6-215ENST00000574501 ZFP91Q96JP5 570 aaPredicted RBP16.84■□□□□ 0.29
SMG6-215ENST00000574501 XPO4Q9C0E2 1151 aaKnown RBP16.84■□□□□ 0.29
SMG6-215ENST00000574501 OSBPL5Q9H0X9 879 aaPredicted RBP16.84■□□□□ 0.29
SMG6-215ENST00000574501 ARGLU1Q9NWB6 273 aaPredicted RBP16.84■□□□□ 0.29
SMG6-215ENST00000574501 SETD1AO15047 1707 aaKnown RBP16.84■□□□□ 0.29
SMG6-215ENST00000574501 CTAGE5O15320 804 aa16.84■□□□□ 0.29
SMG6-215ENST00000574501 KINO60870 393 aaKnown RBP16.84■□□□□ 0.29
SMG6-215ENST00000574501 GIGYF1O75420 1035 aaPredicted RBP16.84■□□□□ 0.29
SMG6-215ENST00000574501 EIF2S2P20042 333 aaKnown RBP16.84■□□□□ 0.29
SMG6-215ENST00000574501 TNNT3P45378 269 aaPredicted RBP16.84■□□□□ 0.29
SMG6-215ENST00000574501 TAF7Q15545 349 aaPredicted RBP16.84■□□□□ 0.29
SMG6-215ENST00000574501 SFPQP23246 707 aaKnown RBP eCLIP16.83■□□□□ 0.28
SMG6-215ENST00000574501 HSP90AB4PQ58FF6 505 aa16.83■□□□□ 0.28
SMG6-215ENST00000574501 CCDC73Q6ZRK6 1079 aa16.83■□□□□ 0.28
SMG6-215ENST00000574501 TXLNBQ8N3L3 684 aa16.83■□□□□ 0.28
SMG6-215ENST00000574501 CCDC34Q96HJ3 373 aa16.83■□□□□ 0.28
SMG6-215ENST00000574501 IFNKQ9P0W0 207 aa16.83■□□□□ 0.28
SMG6-215ENST00000574501 FAM208AQ9UK61 1670 aaKnown RBP16.83■□□□□ 0.28
SMG6-215ENST00000574501 PPFIA3O75145 1194 aa16.82■□□□□ 0.28
SMG6-215ENST00000574501 SASH3O75995 380 aa16.82■□□□□ 0.28
SMG6-215ENST00000574501 AACSQ86V21 672 aa16.82■□□□□ 0.28
SMG6-215ENST00000574501 MNS1Q8NEH6 495 aa16.82■□□□□ 0.28
SMG6-215ENST00000574501 FMNL2Q96PY5 1086 aa16.82■□□□□ 0.28
SMG6-215ENST00000574501 LCMT1Q9UIC8 334 aa16.82■□□□□ 0.28
SMG6-215ENST00000574501 TRIM66O15016 1216 aa16.82■□□□□ 0.28
SMG6-215ENST00000574501 HSP90B1P14625 803 aaKnown RBP16.82■□□□□ 0.28
SMG6-215ENST00000574501 OAS2P29728 719 aaKnown RBP16.82■□□□□ 0.28
SMG6-215ENST00000574501 ADD1P35611 737 aaKnown RBP16.82■□□□□ 0.28
SMG6-215ENST00000574501 GYS2P54840 703 aa16.82■□□□□ 0.28
SMG6-215ENST00000574501 RSPH14Q9UHP6 348 aa16.82■□□□□ 0.28
SMG6-215ENST00000574501 CRYBG1Q9Y4K1 1723 aa16.82■□□□□ 0.28
SMG6-215ENST00000574501 PSDA5PKW4 1024 aaPredicted RBP16.81■□□□□ 0.28
SMG6-215ENST00000574501 URI1O94763 535 aaPredicted RBP16.81■□□□□ 0.28
SMG6-215ENST00000574501 C10orf67Q8IYJ2 551 aa16.81■□□□□ 0.28
SMG6-215ENST00000574501 GPATCH3Q96I76 525 aa16.81■□□□□ 0.28
SMG6-215ENST00000574501 CARD6Q9BX69 1037 aa16.81■□□□□ 0.28
SMG6-215ENST00000574501 IMPACTQ9P2X3 320 aa16.81■□□□□ 0.28
SMG6-215ENST00000574501 PRR36Q9H6K5 1346 aa16.81■□□□□ 0.28
SMG6-215ENST00000574501 ZNF589Q86UQ0 364 aaPredicted RBP16.81■□□□□ 0.28
SMG6-215ENST00000574501 FSIP1Q8NA03 581 aa16.81■□□□□ 0.28
SMG6-215ENST00000574501 ZSCAN16Q9H4T2 348 aaPredicted RBP16.81■□□□□ 0.28
SMG6-215ENST00000574501 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.81■□□□□ 0.28
SMG6-215ENST00000574501 NPHP4O75161 1426 aaPredicted RBP16.81■□□□□ 0.28
SMG6-215ENST00000574501 PEAK1Q9H792 1746 aa16.81■□□□□ 0.28
SMG6-215ENST00000574501 C3P01024 1663 aa16.81■□□□□ 0.28
SMG6-215ENST00000574501 FANCGO15287 622 aa16.8■□□□□ 0.28
SMG6-215ENST00000574501 ETF1P62495 437 aaKnown RBP16.8■□□□□ 0.28
SMG6-215ENST00000574501 USP28Q96RU2 1077 aa16.8■□□□□ 0.28
SMG6-215ENST00000574501 LRRC2Q9BYS8 371 aa16.8■□□□□ 0.28
SMG6-215ENST00000574501 NAT10Q9H0A0 1025 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms