RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 RRP1P56182 461 aaKnown RBP19.76■□□□□ 0.75
CCNE1-204ENST00000574121 DALRD3Q5D0E6 543 aaKnown RBP19.76■□□□□ 0.75
CCNE1-204ENST00000574121 ITPRIPQ8IWB1 547 aa19.76■□□□□ 0.75
CCNE1-204ENST00000574121 CSF1RP07333 972 aa19.75■□□□□ 0.75
CCNE1-204ENST00000574121 DDX46Q7L014 1031 aaKnown RBP19.75■□□□□ 0.75
CCNE1-204ENST00000574121 TTLL11Q8NHH1 800 aa19.75■□□□□ 0.75
CCNE1-204ENST00000574121 PANK1Q8TE04 598 aa19.75■□□□□ 0.75
CCNE1-204ENST00000574121 COL11A2P13942 1736 aaPredicted RBP19.75■□□□□ 0.75
CCNE1-204ENST00000574121 FOXO4P98177 505 aa19.74■□□□□ 0.75
CCNE1-204ENST00000574121 MVPQ14764 893 aaKnown RBP19.74■□□□□ 0.75
CCNE1-204ENST00000574121 SUCLG2Q96I99 432 aa19.74■□□□□ 0.75
CCNE1-204ENST00000574121 MEIS3Q99687 375 aa19.74■□□□□ 0.75
CCNE1-204ENST00000574121 CHMP4BQ9H444 224 aaKnown RBP19.74■□□□□ 0.75
CCNE1-204ENST00000574121 RABL6Q3YEC7 729 aaPredicted RBP19.73■□□□□ 0.75
CCNE1-204ENST00000574121 PRPF40BQ6NWY9 871 aaKnown RBP19.73■□□□□ 0.75
CCNE1-204ENST00000574121 KAZALD1Q96I82 304 aa19.73■□□□□ 0.75
CCNE1-204ENST00000574121 DDX19BQ9UMR2 479 aa19.73■□□□□ 0.75
CCNE1-204ENST00000574121 BBOX1O75936 387 aa19.72■□□□□ 0.75
CCNE1-204ENST00000574121 BRCA1P38398 1863 aaKnown RBP19.72■□□□□ 0.75
CCNE1-204ENST00000574121 GRAPQ13588 217 aa19.72■□□□□ 0.75
CCNE1-204ENST00000574121 TMC4Q7Z404 712 aa19.72■□□□□ 0.75
CCNE1-204ENST00000574121 GRAPLQ8TC17 118 aaPredicted RBP19.72■□□□□ 0.75
CCNE1-204ENST00000574121 BCS1LQ9Y276 419 aa19.72■□□□□ 0.75
CCNE1-204ENST00000574121 DCAF8L1A6NGE4 600 aa19.71■□□□□ 0.75
CCNE1-204ENST00000574121 ZBTB7BO15156 539 aaPredicted RBP19.71■□□□□ 0.75
CCNE1-204ENST00000574121 SOGA3Q5TF21 947 aa19.71■□□□□ 0.75
CCNE1-204ENST00000574121 LMBR1LQ6UX01 489 aa19.71■□□□□ 0.75
CCNE1-204ENST00000574121 CDC5LQ99459 802 aaKnown RBP19.71■□□□□ 0.75
CCNE1-204ENST00000574121 BICC1Q9H694 974 aaKnown RBP19.71■□□□□ 0.75
CCNE1-204ENST00000574121 GPR162Q16538 588 aa19.7■□□□□ 0.74
CCNE1-204ENST00000574121 EPHA10Q5JZY3 1008 aa19.7■□□□□ 0.74
CCNE1-204ENST00000574121 GREM2Q9H772 168 aa19.7■□□□□ 0.74
CCNE1-204ENST00000574121 COG6Q9Y2V7 657 aa19.7■□□□□ 0.74
CCNE1-204ENST00000574121 GRIN3BO60391 1043 aa19.69■□□□□ 0.74
CCNE1-204ENST00000574121 GNAI2P04899 355 aa19.69■□□□□ 0.74
CCNE1-204ENST00000574121 ITGA6P23229 1130 aa19.69■□□□□ 0.74
CCNE1-204ENST00000574121 RPS8P62241 208 aaKnown RBP19.69■□□□□ 0.74
CCNE1-204ENST00000574121 GRIPAP1Q4V328 841 aa19.69■□□□□ 0.74
CCNE1-204ENST00000574121 C20orf194Q5TEA3 1177 aa19.69■□□□□ 0.74
CCNE1-204ENST00000574121 CC2D2BQ6DHV5 1058 aa19.69■□□□□ 0.74
CCNE1-204ENST00000574121 ANKRD44Q8N8A2 993 aa19.69■□□□□ 0.74
CCNE1-204ENST00000574121 C7orf43Q8WVR3 580 aa19.69■□□□□ 0.74
CCNE1-204ENST00000574121 MYH3P11055 1940 aa19.68■□□□□ 0.74
CCNE1-204ENST00000574121 PPEF1O14829 653 aaPredicted RBP19.68■□□□□ 0.74
CCNE1-204ENST00000574121 YBX3P16989 372 aaKnown RBP eCLIP19.68■□□□□ 0.74
CCNE1-204ENST00000574121 IFIT5Q13325 482 aaKnown RBP19.68■□□□□ 0.74
CCNE1-204ENST00000574121 CCDC57Q2TAC2 916 aa19.68■□□□□ 0.74
CCNE1-204ENST00000574121 FAM161AQ3B820 660 aa19.68■□□□□ 0.74
CCNE1-204ENST00000574121 LRRFIP2Q9Y608 721 aaKnown RBP19.68■□□□□ 0.74
CCNE1-204ENST00000574121 ANKRD18BA2A2Z9 1011 aa19.67■□□□□ 0.74
CCNE1-204ENST00000574121 MTX1Q13505 466 aa19.67■□□□□ 0.74
CCNE1-204ENST00000574121 ANKRD18AQ8IVF6 992 aa19.67■□□□□ 0.74
CCNE1-204ENST00000574121 PELP1Q8IZL8 1130 aaKnown RBP19.67■□□□□ 0.74
CCNE1-204ENST00000574121 CELF1Q92879 486 aaKnown RBP19.67■□□□□ 0.74
CCNE1-204ENST00000574121 CCDC85AQ96PX6 553 aaPredicted RBP19.67■□□□□ 0.74
CCNE1-204ENST00000574121 TMX4Q9H1E5 349 aaPredicted RBP19.67■□□□□ 0.74
CCNE1-204ENST00000574121 SEC31BQ9NQW1 1179 aa19.67■□□□□ 0.74
CCNE1-204ENST00000574121 WWC3Q9ULE0 1092 aa19.67■□□□□ 0.74
CCNE1-204ENST00000574121 ATP6V0A2Q9Y487 856 aa19.67■□□□□ 0.74
CCNE1-204ENST00000574121 SP8Q8IXZ3 490 aa19.66■□□□□ 0.74
CCNE1-204ENST00000574121 CHMP3Q9Y3E7 222 aa19.66■□□□□ 0.74
CCNE1-204ENST00000574121 SUPT16HQ9Y5B9 1047 aaKnown RBP19.66■□□□□ 0.74
CCNE1-204ENST00000574121 C21orf2O43822 256 aa19.65■□□□□ 0.74
CCNE1-204ENST00000574121 CENPBP07199 599 aaPredicted RBP19.65■□□□□ 0.74
CCNE1-204ENST00000574121 CCDC93Q567U6 631 aa19.65■□□□□ 0.74
CCNE1-204ENST00000574121 ZBTB40Q9NUA8 1239 aa19.65■□□□□ 0.74
CCNE1-204ENST00000574121 BSDC1Q9NW68 430 aaPredicted RBP19.65■□□□□ 0.74
CCNE1-204ENST00000574121 ARFGEF1Q9Y6D6 1849 aa19.65■□□□□ 0.74
CCNE1-204ENST00000574121 IGHMBP2P38935 993 aaKnown RBP19.64■□□□□ 0.73
CCNE1-204ENST00000574121 RTKN2Q8IZC4 609 aa19.64■□□□□ 0.73
CCNE1-204ENST00000574121 SLX4Q8IY92 1834 aa19.64■□□□□ 0.73
CCNE1-204ENST00000574121 MPHOSPH8Q99549 860 aa19.63■□□□□ 0.73
CCNE1-204ENST00000574121 LTBP3Q9NS15 1303 aa19.62■□□□□ 0.73
CCNE1-204ENST00000574121 TAF7LQ5H9L4 462 aa19.62■□□□□ 0.73
CCNE1-204ENST00000574121 AAMPQ13685 434 aa19.61■□□□□ 0.73
CCNE1-204ENST00000574121 ZNF219Q9P2Y4 722 aaPredicted RBP19.61■□□□□ 0.73
CCNE1-204ENST00000574121 FBXO3Q9UK99 471 aa19.61■□□□□ 0.73
CCNE1-204ENST00000574121 SNED1Q8TER0 1413 aa19.6■□□□□ 0.73
CCNE1-204ENST00000574121 SRGAP3O43295 1099 aa19.6■□□□□ 0.73
CCNE1-204ENST00000574121 LRRC37AA6NMS7 1700 aa19.59■□□□□ 0.73
CCNE1-204ENST00000574121 RFX5P48382 616 aaPredicted RBP19.59■□□□□ 0.73
CCNE1-204ENST00000574121 ATP8B2P98198 1209 aa19.59■□□□□ 0.73
CCNE1-204ENST00000574121 LDHAL6AQ6ZMR3 332 aa19.59■□□□□ 0.73
CCNE1-204ENST00000574121 ARHGAP27Q6ZUM4 889 aa19.59■□□□□ 0.73
CCNE1-204ENST00000574121 PSMD1Q99460 953 aa19.59■□□□□ 0.73
CCNE1-204ENST00000574121 PODXL2Q9NZ53 605 aa19.59■□□□□ 0.73
CCNE1-204ENST00000574121 COL4A1P02462 1669 aa19.59■□□□□ 0.73
CCNE1-204ENST00000574121 NFKBIEO00221 500 aa19.58■□□□□ 0.72
CCNE1-204ENST00000574121 OLFM4Q6UX06 510 aa19.58■□□□□ 0.72
CCNE1-204ENST00000574121 RPAP2Q8IXW5 612 aaPredicted RBP19.58■□□□□ 0.72
CCNE1-204ENST00000574121 MPNDQ8N594 471 aa19.58■□□□□ 0.72
CCNE1-204ENST00000574121 RTFDC1Q9BY42 306 aaPredicted RBP19.58■□□□□ 0.72
CCNE1-204ENST00000574121 TAOK3Q9H2K8 898 aa19.58■□□□□ 0.72
CCNE1-204ENST00000574121 C1orf115Q9H7X2 142 aa19.58■□□□□ 0.72
CCNE1-204ENST00000574121 MINPP1Q9UNW1 487 aa19.58■□□□□ 0.72
CCNE1-204ENST00000574121 XDHP47989 1333 aa19.57■□□□□ 0.72
CCNE1-204ENST00000574121 CACNA1SQ13698 1873 aa19.57■□□□□ 0.72
CCNE1-204ENST00000574121 FKBP4Q02790 459 aaKnown RBP eCLIP19.57■□□□□ 0.72
CCNE1-204ENST00000574121 PTPN12Q05209 780 aaKnown RBP19.57■□□□□ 0.72
CCNE1-204ENST00000574121 POLA2Q14181 598 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms