RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 ZGPATQ8N5A5 531 aaKnown RBP19.22■□□□□ 0.67
USP43-204ENST00000573955 EVI5LQ96CN4 794 aa19.22■□□□□ 0.67
USP43-204ENST00000573955 VGLL3A8MV65 326 aa19.21■□□□□ 0.67
USP43-204ENST00000573955 FAM89AQ96GI7 184 aa19.21■□□□□ 0.67
USP43-204ENST00000573955 FAM227BQ96M60 508 aa19.21■□□□□ 0.67
USP43-204ENST00000573955 TEX13AQ9BXU3 409 aaPredicted RBP19.21■□□□□ 0.67
USP43-204ENST00000573955 LSG1Q9H089 658 aaKnown RBP19.21■□□□□ 0.67
USP43-204ENST00000573955 GZF1Q9H116 711 aaPredicted RBP19.21■□□□□ 0.67
USP43-204ENST00000573955 ZBTB1Q9Y2K1 713 aa19.21■□□□□ 0.67
USP43-204ENST00000573955 LRP6O75581 1613 aa19.21■□□□□ 0.67
USP43-204ENST00000573955 TCIRG1Q13488 830 aa19.21■□□□□ 0.67
USP43-204ENST00000573955 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.21■□□□□ 0.67
USP43-204ENST00000573955 DBNDD2Q9BQY9 259 aa19.21■□□□□ 0.67
USP43-204ENST00000573955 SSFA2P28290 1259 aa19.21■□□□□ 0.66
USP43-204ENST00000573955 HLFQ16534 295 aa19.21■□□□□ 0.66
USP43-204ENST00000573955 SYNE4Q8N205 404 aa19.21■□□□□ 0.66
USP43-204ENST00000573955 FSD1Q9BTV5 496 aa19.21■□□□□ 0.66
USP43-204ENST00000573955 RAD50Q92878 1312 aa19.2■□□□□ 0.66
USP43-204ENST00000573955 OFD1O75665 1012 aa19.2■□□□□ 0.66
USP43-204ENST00000573955 HSPA4P34932 840 aa19.2■□□□□ 0.66
USP43-204ENST00000573955 MEX3CQ5U5Q3 659 aaKnown RBP19.2■□□□□ 0.66
USP43-204ENST00000573955 ARID3AQ99856 593 aa19.2■□□□□ 0.66
USP43-204ENST00000573955 TJP1Q07157 1748 aa19.2■□□□□ 0.66
USP43-204ENST00000573955 CYP19A1P11511 503 aaPredicted RBP19.2■□□□□ 0.66
USP43-204ENST00000573955 PTH1RQ03431 593 aa19.2■□□□□ 0.66
USP43-204ENST00000573955 ZFP91Q96JP5 570 aaPredicted RBP19.2■□□□□ 0.66
USP43-204ENST00000573955 KIF20AO95235 890 aa19.19■□□□□ 0.66
USP43-204ENST00000573955 RAB3GAP1Q15042 981 aa19.19■□□□□ 0.66
USP43-204ENST00000573955 LRRC24Q50LG9 513 aa19.19■□□□□ 0.66
USP43-204ENST00000573955 NEUROD6Q96NK8 337 aa19.19■□□□□ 0.66
USP43-204ENST00000573955 DNAJC2Q99543 621 aaKnown RBP19.19■□□□□ 0.66
USP43-204ENST00000573955 ISCA1Q9BUE6 129 aa19.19■□□□□ 0.66
USP43-204ENST00000573955 GRPEL1Q9HAV7 217 aa19.19■□□□□ 0.66
USP43-204ENST00000573955 CIZ1Q9ULV3 898 aaPredicted RBP19.19■□□□□ 0.66
USP43-204ENST00000573955 NRAPQ86VF7 1730 aa19.19■□□□□ 0.66
USP43-204ENST00000573955 COL15A1P39059 1388 aa19.19■□□□□ 0.66
USP43-204ENST00000573955 JCADQ9P266 1359 aa19.19■□□□□ 0.66
USP43-204ENST00000573955 NMIQ13287 307 aaPredicted RBP19.19■□□□□ 0.66
USP43-204ENST00000573955 USP21Q9UK80 565 aa19.19■□□□□ 0.66
USP43-204ENST00000573955 PKP1Q13835 747 aa19.18■□□□□ 0.66
USP43-204ENST00000573955 SMIM5Q71RC9 77 aa19.18■□□□□ 0.66
USP43-204ENST00000573955 RASEFQ8IZ41 740 aa19.18■□□□□ 0.66
USP43-204ENST00000573955 RUFY2Q8WXA3 655 aa19.18■□□□□ 0.66
USP43-204ENST00000573955 TBC1D2BQ9UPU7 963 aa19.18■□□□□ 0.66
USP43-204ENST00000573955 SLIT2O94813 1529 aa19.18■□□□□ 0.66
USP43-204ENST00000573955 ZSCAN20P17040 1043 aaPredicted RBP19.18■□□□□ 0.66
USP43-204ENST00000573955 ANAPC15P60006 121 aa19.18■□□□□ 0.66
USP43-204ENST00000573955 PUS3Q9BZE2 481 aaKnown RBP19.18■□□□□ 0.66
USP43-204ENST00000573955 BCL9LQ86UU0 1499 aa19.17■□□□□ 0.66
USP43-204ENST00000573955 ATG9AQ7Z3C6 839 aa19.17■□□□□ 0.66
USP43-204ENST00000573955 TMX3Q96JJ7 454 aa19.17■□□□□ 0.66
USP43-204ENST00000573955 SNX14Q9Y5W7 946 aa19.17■□□□□ 0.66
USP43-204ENST00000573955 MAP3K15Q6ZN16 1313 aa19.17■□□□□ 0.66
USP43-204ENST00000573955 CHGBP05060 677 aa19.17■□□□□ 0.66
USP43-204ENST00000573955 TIMM10P62072 90 aa19.17■□□□□ 0.66
USP43-204ENST00000573955 LARP6Q9BRS8 491 aaKnown RBP19.17■□□□□ 0.66
USP43-204ENST00000573955 A0A0D9SFI3 127 aa19.16■□□□□ 0.66
USP43-204ENST00000573955 CPA1P15085 419 aa19.16■□□□□ 0.66
USP43-204ENST00000573955 PRPF40BQ6NWY9 871 aaKnown RBP19.16■□□□□ 0.66
USP43-204ENST00000573955 DOT1LQ8TEK3 1739 aa19.16■□□□□ 0.66
USP43-204ENST00000573955 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.15■□□□□ 0.66
USP43-204ENST00000573955 GIGYF2Q6Y7W6 1299 aaKnown RBP19.15■□□□□ 0.66
USP43-204ENST00000573955 CCDC57Q2TAC2 916 aa19.14■□□□□ 0.65
USP43-204ENST00000573955 ISY1Q9ULR0 285 aaKnown RBP19.14■□□□□ 0.65
USP43-204ENST00000573955 KCNJ4P48050 445 aa19.14■□□□□ 0.65
USP43-204ENST00000573955 FOXD4L5Q5VV16 416 aaPredicted RBP19.14■□□□□ 0.65
USP43-204ENST00000573955 DDX46Q7L014 1031 aaKnown RBP19.14■□□□□ 0.65
USP43-204ENST00000573955 TEX2Q8IWB9 1127 aa19.14■□□□□ 0.65
USP43-204ENST00000573955 FOXD4L4Q8WXT5 416 aaPredicted RBP19.14■□□□□ 0.65
USP43-204ENST00000573955 WNK3Q9BYP7 1800 aa19.14■□□□□ 0.65
USP43-204ENST00000573955 ATP5JP18859 108 aa19.13■□□□□ 0.65
USP43-204ENST00000573955 GTPBP4Q9BZE4 634 aaKnown RBP19.13■□□□□ 0.65
USP43-204ENST00000573955 EYA2O00167 538 aa19.13■□□□□ 0.65
USP43-204ENST00000573955 DZIP3Q86Y13 1208 aaKnown RBP19.13■□□□□ 0.65
USP43-204ENST00000573955 FAM177BA6PVY3 158 aa19.12■□□□□ 0.65
USP43-204ENST00000573955 ATP6V1AP38606 617 aa19.12■□□□□ 0.65
USP43-204ENST00000573955 ZBTB38Q8NAP3 1195 aaPredicted RBP19.12■□□□□ 0.65
USP43-204ENST00000573955 GBP4Q96PP9 640 aa19.12■□□□□ 0.65
USP43-204ENST00000573955 CDCA7Q9BWT1 371 aaPredicted RBP19.12■□□□□ 0.65
USP43-204ENST00000573955 THRAP3Q9Y2W1 955 aaKnown RBP19.12■□□□□ 0.65
USP43-204ENST00000573955 TRAK2O60296 914 aa19.12■□□□□ 0.65
USP43-204ENST00000573955 PCCAP05165 728 aaPredicted RBP19.12■□□□□ 0.65
USP43-204ENST00000573955 IL15P40933 162 aaPredicted RBP19.12■□□□□ 0.65
USP43-204ENST00000573955 ZNF589Q86UQ0 364 aaPredicted RBP19.12■□□□□ 0.65
USP43-204ENST00000573955 NLRP10Q86W26 655 aa19.12■□□□□ 0.65
USP43-204ENST00000573955 CCDC171Q6TFL3 1326 aa19.12■□□□□ 0.65
USP43-204ENST00000573955 LETM1O95202 739 aaPredicted RBP19.11■□□□□ 0.65
USP43-204ENST00000573955 CASTP20810 708 aaKnown RBP19.11■□□□□ 0.65
USP43-204ENST00000573955 CDK11BP21127 795 aaKnown RBP19.11■□□□□ 0.65
USP43-204ENST00000573955 ADCK5Q3MIX3 580 aa19.11■□□□□ 0.65
USP43-204ENST00000573955 CCDC94Q9BW85 323 aaPredicted RBP19.11■□□□□ 0.65
USP43-204ENST00000573955 RBM8AQ9Y5S9 174 aaKnown RBP19.11■□□□□ 0.65
USP43-204ENST00000573955 DDX11L8A8MPP1 907 aa19.1■□□□□ 0.65
USP43-204ENST00000573955 HIP1O00291 1037 aa19.1■□□□□ 0.65
USP43-204ENST00000573955 TRIM28Q13263 835 aaKnown RBP19.1■□□□□ 0.65
USP43-204ENST00000573955 SLFNL1Q499Z3 407 aa19.1■□□□□ 0.65
USP43-204ENST00000573955 HOMEZQ8IX15 550 aa19.1■□□□□ 0.65
USP43-204ENST00000573955 EPB41L2O43491 1005 aaKnown RBP19.1■□□□□ 0.65
USP43-204ENST00000573955 MCM2P49736 904 aa19.1■□□□□ 0.65
USP43-204ENST00000573955 JAKMIP1Q96N16 626 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms