RNA–Protein interactions for RNA: ENST00000573872.5

TRAP1-208, Transcript of TNF receptor associated protein 1, humanhuman

TSL 3

Gene TRAP1, Length 656 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-208ENST00000573872 CTSWP56202 376 aa16.63■□□□□ 0.25
TRAP1-208ENST00000573872 RBM17Q96I25 401 aaKnown RBP16.63■□□□□ 0.25
TRAP1-208ENST00000573872 C9orf78Q9NZ63 289 aaPredicted RBP16.63■□□□□ 0.25
TRAP1-208ENST00000573872 GRIN3BO60391 1043 aa16.62■□□□□ 0.25
TRAP1-208ENST00000573872 CSF1RP07333 972 aa16.62■□□□□ 0.25
TRAP1-208ENST00000573872 FOXO4P98177 505 aa16.62■□□□□ 0.25
TRAP1-208ENST00000573872 TTLL11Q8NHH1 800 aa16.62■□□□□ 0.25
TRAP1-208ENST00000573872 KAZALD1Q96I82 304 aa16.62■□□□□ 0.25
TRAP1-208ENST00000573872 TAF1P21675 1872 aa16.62■□□□□ 0.25
TRAP1-208ENST00000573872 RTL9Q8NET4 1388 aa16.62■□□□□ 0.25
TRAP1-208ENST00000573872 SNED1Q8TER0 1413 aa16.62■□□□□ 0.25
TRAP1-208ENST00000573872 RLBP1P12271 317 aa16.61■□□□□ 0.25
TRAP1-208ENST00000573872 GRAPQ13588 217 aa16.61■□□□□ 0.25
TRAP1-208ENST00000573872 CCDC152Q4G0S7 254 aa16.61■□□□□ 0.25
TRAP1-208ENST00000573872 GRAPLQ8TC17 118 aaPredicted RBP16.61■□□□□ 0.25
TRAP1-208ENST00000573872 CLUAP1Q96AJ1 413 aa16.61■□□□□ 0.25
TRAP1-208ENST00000573872 SUCLG2Q96I99 432 aa16.61■□□□□ 0.25
TRAP1-208ENST00000573872 DCAF8L1A6NGE4 600 aa16.6■□□□□ 0.25
TRAP1-208ENST00000573872 EPHA10Q5JZY3 1008 aa16.6■□□□□ 0.25
TRAP1-208ENST00000573872 DDX46Q7L014 1031 aaKnown RBP16.6■□□□□ 0.25
TRAP1-208ENST00000573872 TMEM57Q8N5G2 664 aa16.6■□□□□ 0.25
TRAP1-208ENST00000573872 FER1L6Q2WGJ9 1857 aa16.59■□□□□ 0.25
TRAP1-208ENST00000573872 C21orf2O43822 256 aa16.59■□□□□ 0.25
TRAP1-208ENST00000573872 DZIP1LQ8IYY4 767 aaKnown RBP16.59■□□□□ 0.25
TRAP1-208ENST00000573872 CELF1Q92879 486 aaKnown RBP16.59■□□□□ 0.25
TRAP1-208ENST00000573872 GREM2Q9H772 168 aa16.59■□□□□ 0.25
TRAP1-208ENST00000573872 SEC31BQ9NQW1 1179 aa16.59■□□□□ 0.25
TRAP1-208ENST00000573872 PPEF1O14829 653 aaPredicted RBP16.58■□□□□ 0.24
TRAP1-208ENST00000573872 BBOX1O75936 387 aa16.58■□□□□ 0.24
TRAP1-208ENST00000573872 RABL6Q3YEC7 729 aaPredicted RBP16.58■□□□□ 0.24
TRAP1-208ENST00000573872 OLFM4Q6UX06 510 aa16.58■□□□□ 0.24
TRAP1-208ENST00000573872 SLC51AQ86UW1 340 aa16.58■□□□□ 0.24
TRAP1-208ENST00000573872 CCDC85AQ96PX6 553 aaPredicted RBP16.58■□□□□ 0.24
TRAP1-208ENST00000573872 MEIS3Q99687 375 aa16.58■□□□□ 0.24
TRAP1-208ENST00000573872 LRRC37AA6NMS7 1700 aa16.58■□□□□ 0.24
TRAP1-208ENST00000573872 PLIN1O60240 522 aa16.57■□□□□ 0.24
TRAP1-208ENST00000573872 SOGA3Q5TF21 947 aa16.57■□□□□ 0.24
TRAP1-208ENST00000573872 ATP6V0A2Q9Y487 856 aa16.57■□□□□ 0.24
TRAP1-208ENST00000573872 NFKBIEO00221 500 aa16.56■□□□□ 0.24
TRAP1-208ENST00000573872 RPS8P62241 208 aaKnown RBP16.56■□□□□ 0.24
TRAP1-208ENST00000573872 FAM161AQ3B820 660 aa16.56■□□□□ 0.24
TRAP1-208ENST00000573872 CC2D2BQ6DHV5 1058 aa16.56■□□□□ 0.24
TRAP1-208ENST00000573872 LMBR1LQ6UX01 489 aa16.56■□□□□ 0.24
TRAP1-208ENST00000573872 TMC4Q7Z404 712 aa16.56■□□□□ 0.24
TRAP1-208ENST00000573872 FTSJ3Q8IY81 847 aaKnown RBP16.56■□□□□ 0.24
TRAP1-208ENST00000573872 ANKRD44Q8N8A2 993 aa16.56■□□□□ 0.24
TRAP1-208ENST00000573872 BICC1Q9H694 974 aaKnown RBP16.56■□□□□ 0.24
TRAP1-208ENST00000573872 ZNF219Q9P2Y4 722 aaPredicted RBP16.56■□□□□ 0.24
TRAP1-208ENST00000573872 CHD4Q14839 1912 aa16.55■□□□□ 0.24
TRAP1-208ENST00000573872 LTBP3Q9NS15 1303 aa16.55■□□□□ 0.24
TRAP1-208ENST00000573872 UBTFL1P0CB47 393 aaPredicted RBP16.55■□□□□ 0.24
TRAP1-208ENST00000573872 ITGA6P23229 1130 aa16.55■□□□□ 0.24
TRAP1-208ENST00000573872 CCDC93Q567U6 631 aa16.55■□□□□ 0.24
TRAP1-208ENST00000573872 ARHGAP27Q6ZUM4 889 aa16.55■□□□□ 0.24
TRAP1-208ENST00000573872 SP8Q8IXZ3 490 aa16.55■□□□□ 0.24
TRAP1-208ENST00000573872 PANK1Q8TE04 598 aa16.55■□□□□ 0.24
TRAP1-208ENST00000573872 SBF1O95248 1867 aa16.54■□□□□ 0.24
TRAP1-208ENST00000573872 MS4A1P11836 297 aa16.54■□□□□ 0.24
TRAP1-208ENST00000573872 PRELPP51888 382 aa16.54■□□□□ 0.24
TRAP1-208ENST00000573872 CDC5LQ99459 802 aaKnown RBP16.54■□□□□ 0.24
TRAP1-208ENST00000573872 LTBP1Q14766 1721 aa16.53■□□□□ 0.24
TRAP1-208ENST00000573872 ZBTB7BO15156 539 aaPredicted RBP16.53■□□□□ 0.24
TRAP1-208ENST00000573872 GNAI3P08754 354 aa16.53■□□□□ 0.24
TRAP1-208ENST00000573872 RASSF7Q02833 373 aa16.53■□□□□ 0.24
TRAP1-208ENST00000573872 PDE3AQ14432 1141 aa16.53■□□□□ 0.24
TRAP1-208ENST00000573872 ANKRD18AQ8IVF6 992 aa16.53■□□□□ 0.24
TRAP1-208ENST00000573872 RTKN2Q8IZC4 609 aa16.53■□□□□ 0.24
TRAP1-208ENST00000573872 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.53■□□□□ 0.24
TRAP1-208ENST00000573872 GRIPAP1Q4V328 841 aa16.52■□□□□ 0.24
TRAP1-208ENST00000573872 C20orf194Q5TEA3 1177 aa16.52■□□□□ 0.24
TRAP1-208ENST00000573872 ITPRIPQ8IWB1 547 aa16.52■□□□□ 0.24
TRAP1-208ENST00000573872 PSMD1Q99460 953 aa16.52■□□□□ 0.24
TRAP1-208ENST00000573872 BSDC1Q9NW68 430 aaPredicted RBP16.52■□□□□ 0.24
TRAP1-208ENST00000573872 LRRFIP2Q9Y608 721 aaKnown RBP16.52■□□□□ 0.24
TRAP1-208ENST00000573872 DUOX1Q9NRD9 1551 aa16.51■□□□□ 0.23
TRAP1-208ENST00000573872 ANKRD18BA2A2Z9 1011 aa16.51■□□□□ 0.23
TRAP1-208ENST00000573872 RRP1P56182 461 aaKnown RBP16.51■□□□□ 0.23
TRAP1-208ENST00000573872 FKBP4Q02790 459 aaKnown RBP eCLIP16.51■□□□□ 0.23
TRAP1-208ENST00000573872 IFIT5Q13325 482 aaKnown RBP16.51■□□□□ 0.23
TRAP1-208ENST00000573872 MVPQ14764 893 aaKnown RBP16.51■□□□□ 0.23
TRAP1-208ENST00000573872 RTFDC1Q9BY42 306 aaPredicted RBP16.51■□□□□ 0.23
TRAP1-208ENST00000573872 TAOK3Q9H2K8 898 aa16.51■□□□□ 0.23
TRAP1-208ENST00000573872 HDAC5Q9UQL6 1122 aa16.51■□□□□ 0.23
TRAP1-208ENST00000573872 SPEF2Q9C093 1822 aa16.51■□□□□ 0.23
TRAP1-208ENST00000573872 CCDC57Q2TAC2 916 aa16.5■□□□□ 0.23
TRAP1-208ENST00000573872 CHMP3Q9Y3E7 222 aa16.5■□□□□ 0.23
TRAP1-208ENST00000573872 GNAI2P04899 355 aa16.49■□□□□ 0.23
TRAP1-208ENST00000573872 IGHMBP2P38935 993 aaKnown RBP16.49■□□□□ 0.23
TRAP1-208ENST00000573872 RFX5P48382 616 aaPredicted RBP16.49■□□□□ 0.23
TRAP1-208ENST00000573872 MTX1Q13505 466 aa16.49■□□□□ 0.23
TRAP1-208ENST00000573872 CCDC88AQ3V6T2 1871 aa16.49■□□□□ 0.23
TRAP1-208ENST00000573872 PODXL2Q9NZ53 605 aa16.49■□□□□ 0.23
TRAP1-208ENST00000573872 COG6Q9Y2V7 657 aa16.49■□□□□ 0.23
TRAP1-208ENST00000573872 DICER1Q9UPY3 1922 aaKnown RBP16.49■□□□□ 0.23
TRAP1-208ENST00000573872 LMNB1P20700 586 aa16.48■□□□□ 0.23
TRAP1-208ENST00000573872 GPSM2P81274 684 aa16.48■□□□□ 0.23
TRAP1-208ENST00000573872 MPNDQ8N594 471 aa16.48■□□□□ 0.23
TRAP1-208ENST00000573872 ZNF594Q96JF6 807 aaPredicted RBP16.48■□□□□ 0.23
TRAP1-208ENST00000573872 TMX4Q9H1E5 349 aaPredicted RBP16.48■□□□□ 0.23
TRAP1-208ENST00000573872 MINPP1Q9UNW1 487 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms