RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 CELF1Q92879 486 aaKnown RBP35.4■■■■□ 3.26
SCARF1-207ENST00000573867 BBOX1O75936 387 aa35.39■■■■□ 3.26
SCARF1-207ENST00000573867 GCKRQ14397 625 aa35.39■■■■□ 3.26
SCARF1-207ENST00000573867 NMRK2Q9NPI5 230 aa35.39■■■■□ 3.26
SCARF1-207ENST00000573867 H7C1W4 665 aa35.38■■■■□ 3.25
SCARF1-207ENST00000573867 PDE8AO60658 829 aa35.38■■■■□ 3.25
SCARF1-207ENST00000573867 BEND3Q5T5X7 828 aa35.38■■■■□ 3.25
SCARF1-207ENST00000573867 PSMD1Q99460 953 aa35.38■■■■□ 3.25
SCARF1-207ENST00000573867 KIF3CO14782 793 aa35.37■■■■□ 3.25
SCARF1-207ENST00000573867 CASP7P55210 303 aa35.37■■■■□ 3.25
SCARF1-207ENST00000573867 HNRNPUQ00839 825 aaKnown RBP eCLIP35.37■■■■□ 3.25
SCARF1-207ENST00000573867 BCL2L13Q9BXK5 485 aa35.37■■■■□ 3.25
SCARF1-207ENST00000573867 UBE3BQ7Z3V4 1068 aa35.36■■■■□ 3.25
SCARF1-207ENST00000573867 SEC31BQ9NQW1 1179 aa35.36■■■■□ 3.25
SCARF1-207ENST00000573867 COL4A5P29400 1685 aa35.36■■■■□ 3.25
SCARF1-207ENST00000573867 SP8Q8IXZ3 490 aa35.35■■■■□ 3.25
SCARF1-207ENST00000573867 CCDC85AQ96PX6 553 aaPredicted RBP35.35■■■■□ 3.25
SCARF1-207ENST00000573867 LRRC37AA6NMS7 1700 aa35.35■■■■□ 3.25
SCARF1-207ENST00000573867 HSP90B1P14625 803 aaKnown RBP35.33■■■■□ 3.25
SCARF1-207ENST00000573867 IARSP41252 1262 aaKnown RBP35.33■■■■□ 3.25
SCARF1-207ENST00000573867 GLTPD2A6NH11 291 aa35.32■■■■□ 3.24
SCARF1-207ENST00000573867 CTSWP56202 376 aa35.32■■■■□ 3.24
SCARF1-207ENST00000573867 KDM2BQ8NHM5 1336 aa35.32■■■■□ 3.24
SCARF1-207ENST00000573867 GRIPAP1Q4V328 841 aa35.31■■■■□ 3.24
SCARF1-207ENST00000573867 ALDH1L2Q3SY69 923 aa35.3■■■■□ 3.24
SCARF1-207ENST00000573867 CCDC152Q4G0S7 254 aa35.3■■■■□ 3.24
SCARF1-207ENST00000573867 DUOX1Q9NRD9 1551 aa35.3■■■■□ 3.24
SCARF1-207ENST00000573867 TTLL11Q8NHH1 800 aa35.29■■■■□ 3.24
SCARF1-207ENST00000573867 C1QTNF8P60827 252 aa35.28■■■■□ 3.24
SCARF1-207ENST00000573867 SLC4A10Q6U841 1118 aa35.28■■■■□ 3.24
SCARF1-207ENST00000573867 TMC4Q7Z404 712 aa35.28■■■■□ 3.24
SCARF1-207ENST00000573867 RTFDC1Q9BY42 306 aaPredicted RBP35.28■■■■□ 3.24
SCARF1-207ENST00000573867 CT47B1P0C2W7 299 aaPredicted RBP35.27■■■■□ 3.24
SCARF1-207ENST00000573867 RPS8P62241 208 aaKnown RBP35.27■■■■□ 3.24
SCARF1-207ENST00000573867 PLA2G12BQ9BX93 195 aa35.27■■■■□ 3.24
SCARF1-207ENST00000573867 RRAGCQ9HB90 399 aa35.27■■■■□ 3.24
SCARF1-207ENST00000573867 SMC4Q9NTJ3 1288 aa35.27■■■■□ 3.24
SCARF1-207ENST00000573867 MPNDQ8N594 471 aa35.26■■■■□ 3.24
SCARF1-207ENST00000573867 GREM2Q9H772 168 aa35.26■■■■□ 3.24
SCARF1-207ENST00000573867 PTPRCP08575 1304 aa35.26■■■■□ 3.23
SCARF1-207ENST00000573867 ZNF541Q9H0D2 1346 aa35.26■■■■□ 3.23
SCARF1-207ENST00000573867 DPP8Q6V1X1 898 aaPredicted RBP35.25■■■■□ 3.23
SCARF1-207ENST00000573867 TMX4Q9H1E5 349 aaPredicted RBP35.25■■■■□ 3.23
SCARF1-207ENST00000573867 MYH3P11055 1940 aa35.25■■■■□ 3.23
SCARF1-207ENST00000573867 LTBP1Q14766 1721 aa35.23■■■■□ 3.23
SCARF1-207ENST00000573867 DDNO94850 711 aaPredicted RBP35.23■■■■□ 3.23
SCARF1-207ENST00000573867 RTL9Q8NET4 1388 aa35.23■■■■□ 3.23
SCARF1-207ENST00000573867 POTECB2RU33 542 aa35.22■■■■□ 3.23
SCARF1-207ENST00000573867 FZD9O00144 591 aa35.22■■■■□ 3.23
SCARF1-207ENST00000573867 ALDH1L1O75891 902 aa35.22■■■■□ 3.23
SCARF1-207ENST00000573867 AOC3Q16853 763 aa35.22■■■■□ 3.23
SCARF1-207ENST00000573867 SRCIN1Q9C0H9 1055 aa35.22■■■■□ 3.23
SCARF1-207ENST00000573867 WDR90Q96KV7 1748 aa35.22■■■■□ 3.23
SCARF1-207ENST00000573867 GRM8O00222 908 aa35.21■■■■□ 3.23
SCARF1-207ENST00000573867 RARSP54136 660 aaKnown RBP35.21■■■■□ 3.23
SCARF1-207ENST00000573867 GPSM2P81274 684 aa35.21■■■■□ 3.23
SCARF1-207ENST00000573867 DPY19L2Q6NUT2 758 aa35.21■■■■□ 3.23
SCARF1-207ENST00000573867 LARGE2Q8N3Y3 721 aa35.21■■■■□ 3.23
SCARF1-207ENST00000573867 PPIP5K2O43314 1243 aa35.2■■■■□ 3.23
SCARF1-207ENST00000573867 CSF1RP07333 972 aa35.19■■■■□ 3.22
SCARF1-207ENST00000573867 FOXO4P98177 505 aa35.19■■■■□ 3.22
SCARF1-207ENST00000573867 FAM161AQ3B820 660 aa35.18■■■■□ 3.22
SCARF1-207ENST00000573867 EPHA10Q5JZY3 1008 aa35.18■■■■□ 3.22
SCARF1-207ENST00000573867 SUPT20HQ8NEM7 779 aa35.18■■■■□ 3.22
SCARF1-207ENST00000573867 NSFL1CQ9UNZ2 370 aaKnown RBP35.18■■■■□ 3.22
SCARF1-207ENST00000573867 ZBED9Q6R2W3 1325 aa35.17■■■■□ 3.22
SCARF1-207ENST00000573867 BRPF1P55201 1214 aaPredicted RBP35.17■■■■□ 3.22
SCARF1-207ENST00000573867 ANKRD18AQ8IVF6 992 aa35.17■■■■□ 3.22
SCARF1-207ENST00000573867 JDP2Q8WYK2 163 aa35.17■■■■□ 3.22
SCARF1-207ENST00000573867 POLLQ9UGP5 575 aa35.17■■■■□ 3.22
SCARF1-207ENST00000573867 NOB1Q9ULX3 412 aaKnown RBP35.16■■■■□ 3.22
SCARF1-207ENST00000573867 KIAA2012Q0VF49 1180 aa35.15■■■■□ 3.22
SCARF1-207ENST00000573867 CDC5LQ99459 802 aaKnown RBP35.15■■■■□ 3.22
SCARF1-207ENST00000573867 VPS33BQ9H267 617 aa35.15■■■■□ 3.22
SCARF1-207ENST00000573867 SPEF2Q9C093 1822 aa35.14■■■■□ 3.22
SCARF1-207ENST00000573867 VEGFAP15692 232 aaPredicted RBP35.14■■■■□ 3.22
SCARF1-207ENST00000573867 GPR101Q96P66 508 aaPredicted RBP35.14■■■■□ 3.22
SCARF1-207ENST00000573867 C9orf78Q9NZ63 289 aaPredicted RBP35.14■■■■□ 3.22
SCARF1-207ENST00000573867 TOMM70O94826 608 aa35.13■■■■□ 3.21
SCARF1-207ENST00000573867 NBPF7P0C2Y1 421 aaPredicted RBP35.13■■■■□ 3.21
SCARF1-207ENST00000573867 ITGA6P23229 1130 aa35.13■■■■□ 3.21
SCARF1-207ENST00000573867 NIM1KQ8IY84 436 aa35.13■■■■□ 3.21
SCARF1-207ENST00000573867 UTYO14607 1347 aa35.12■■■■□ 3.21
SCARF1-207ENST00000573867 TBC1D16Q8TBP0 767 aa35.12■■■■□ 3.21
SCARF1-207ENST00000573867 KAZALD1Q96I82 304 aa35.12■■■■□ 3.21
SCARF1-207ENST00000573867 SUCLG2Q96I99 432 aa35.12■■■■□ 3.21
SCARF1-207ENST00000573867 L3MBTL3Q96JM7 780 aaPredicted RBP35.12■■■■□ 3.21
SCARF1-207ENST00000573867 PODXL2Q9NZ53 605 aa35.12■■■■□ 3.21
SCARF1-207ENST00000573867 BSDC1Q9NW68 430 aaPredicted RBP35.1■■■■□ 3.21
SCARF1-207ENST00000573867 C6orf229H3BNL8 230 aa35.09■■■■□ 3.21
SCARF1-207ENST00000573867 LMBR1LQ6UX01 489 aa35.09■■■■□ 3.21
SCARF1-207ENST00000573867 EIF6P56537 245 aaKnown RBP35.08■■■■□ 3.21
SCARF1-207ENST00000573867 MINPP1Q9UNW1 487 aa35.08■■■■□ 3.21
SCARF1-207ENST00000573867 WTIPA6NIX2 430 aaPredicted RBP35.07■■■■□ 3.2
SCARF1-207ENST00000573867 WASHC4Q2M389 1173 aa35.07■■■■□ 3.2
SCARF1-207ENST00000573867 C16orf71Q8IYS4 520 aaPredicted RBP35.07■■■■□ 3.2
SCARF1-207ENST00000573867 GPC2Q8N158 579 aa35.07■■■■□ 3.2
SCARF1-207ENST00000573867 RBM46Q8TBY0 533 aaKnown RBP35.07■■■■□ 3.2
SCARF1-207ENST00000573867 ANKIB1Q9P2G1 1089 aa35.07■■■■□ 3.2
SCARF1-207ENST00000573867 ZNRF3Q9ULT6 936 aa35.07■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms