RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 STYK1Q6J9G0 422 aa29.24■■■□□ 2.27
TVP23A-206ENST00000572980 FOXO4P98177 505 aa29.23■■■□□ 2.27
TVP23A-206ENST00000572980 TTLL11Q8NHH1 800 aa29.23■■■□□ 2.27
TVP23A-206ENST00000572980 ZNF622Q969S3 477 aaKnown RBP eCLIP29.23■■■□□ 2.27
TVP23A-206ENST00000572980 RBM17Q96I25 401 aaKnown RBP29.23■■■□□ 2.27
TVP23A-206ENST00000572980 KCNA3P22001 575 aa29.22■■■□□ 2.27
TVP23A-206ENST00000572980 HOXA10P31260 410 aaPredicted RBP29.22■■■□□ 2.27
TVP23A-206ENST00000572980 KAZALD1Q96I82 304 aa29.22■■■□□ 2.27
TVP23A-206ENST00000572980 MYH3P11055 1940 aa29.22■■■□□ 2.27
TVP23A-206ENST00000572980 GNAI2P04899 355 aa29.22■■■□□ 2.27
TVP23A-206ENST00000572980 CSF1RP07333 972 aa29.22■■■□□ 2.27
TVP23A-206ENST00000572980 ALDH1B1P30837 517 aa29.22■■■□□ 2.27
TVP23A-206ENST00000572980 DDX46Q7L014 1031 aaKnown RBP29.22■■■□□ 2.27
TVP23A-206ENST00000572980 PIM2Q9P1W9 311 aa29.22■■■□□ 2.27
TVP23A-206ENST00000572980 KIAA1551Q9HCM1 1747 aa29.21■■■□□ 2.27
TVP23A-206ENST00000572980 EPHA10Q5JZY3 1008 aa29.21■■■□□ 2.27
TVP23A-206ENST00000572980 CNKSR1Q969H4 720 aa29.21■■■□□ 2.27
TVP23A-206ENST00000572980 BICC1Q9H694 974 aaKnown RBP29.21■■■□□ 2.27
TVP23A-206ENST00000572980 LMBR1LQ6UX01 489 aa29.2■■■□□ 2.26
TVP23A-206ENST00000572980 CRAMP1Q96RY5 1269 aa29.2■■■□□ 2.26
TVP23A-206ENST00000572980 LRRFIP2Q9Y608 721 aaKnown RBP29.2■■■□□ 2.26
TVP23A-206ENST00000572980 COL11A2P13942 1736 aaPredicted RBP29.2■■■□□ 2.26
TVP23A-206ENST00000572980 CCDC85AQ96PX6 553 aaPredicted RBP29.19■■■□□ 2.26
TVP23A-206ENST00000572980 TTLL6Q8N841 843 aa29.18■■■□□ 2.26
TVP23A-206ENST00000572980 CHMP3Q9Y3E7 222 aa29.18■■■□□ 2.26
TVP23A-206ENST00000572980 DLEC1Q9Y238 1755 aa29.18■■■□□ 2.26
TVP23A-206ENST00000572980 RABL6Q3YEC7 729 aaPredicted RBP29.18■■■□□ 2.26
TVP23A-206ENST00000572980 GREM2Q9H772 168 aa29.18■■■□□ 2.26
TVP23A-206ENST00000572980 RTL9Q8NET4 1388 aa29.17■■■□□ 2.26
TVP23A-206ENST00000572980 ANKRD44Q8N8A2 993 aa29.16■■■□□ 2.26
TVP23A-206ENST00000572980 DALRD3Q5D0E6 543 aaKnown RBP29.15■■■□□ 2.26
TVP23A-206ENST00000572980 ZBTB40Q9NUA8 1239 aa29.15■■■□□ 2.26
TVP23A-206ENST00000572980 ITGA6P23229 1130 aa29.14■■■□□ 2.26
TVP23A-206ENST00000572980 IFIT5Q13325 482 aaKnown RBP29.14■■■□□ 2.26
TVP23A-206ENST00000572980 GRAPQ13588 217 aa29.14■■■□□ 2.26
TVP23A-206ENST00000572980 CCDC57Q2TAC2 916 aa29.14■■■□□ 2.26
TVP23A-206ENST00000572980 FAM161AQ3B820 660 aa29.14■■■□□ 2.26
TVP23A-206ENST00000572980 GRAPLQ8TC17 118 aaPredicted RBP29.14■■■□□ 2.26
TVP23A-206ENST00000572980 CRBNQ96SW2 442 aa29.14■■■□□ 2.26
TVP23A-206ENST00000572980 CDC5LQ99459 802 aaKnown RBP29.14■■■□□ 2.26
TVP23A-206ENST00000572980 SEC31BQ9NQW1 1179 aa29.13■■■□□ 2.25
TVP23A-206ENST00000572980 ANKRD18BA2A2Z9 1011 aa29.13■■■□□ 2.25
TVP23A-206ENST00000572980 BBOX1O75936 387 aa29.13■■■□□ 2.25
TVP23A-206ENST00000572980 PRPF40BQ6NWY9 871 aaKnown RBP29.13■■■□□ 2.25
TVP23A-206ENST00000572980 WWC3Q9ULE0 1092 aa29.13■■■□□ 2.25
TVP23A-206ENST00000572980 BRCA1P38398 1863 aaKnown RBP29.12■■■□□ 2.25
TVP23A-206ENST00000572980 BCS1LQ9Y276 419 aa29.12■■■□□ 2.25
TVP23A-206ENST00000572980 RPS8P62241 208 aaKnown RBP29.11■■■□□ 2.25
TVP23A-206ENST00000572980 C1orf115Q9H7X2 142 aa29.11■■■□□ 2.25
TVP23A-206ENST00000572980 ANKRD18AQ8IVF6 992 aa29.1■■■□□ 2.25
TVP23A-206ENST00000572980 CELF1Q92879 486 aaKnown RBP29.1■■■□□ 2.25
TVP23A-206ENST00000572980 MTX1Q13505 466 aa29.09■■■□□ 2.25
TVP23A-206ENST00000572980 TMC4Q7Z404 712 aa29.09■■■□□ 2.25
TVP23A-206ENST00000572980 TAF7LQ5H9L4 462 aa29.09■■■□□ 2.25
TVP23A-206ENST00000572980 PPEF1O14829 653 aaPredicted RBP29.08■■■□□ 2.25
TVP23A-206ENST00000572980 IGHMBP2P38935 993 aaKnown RBP29.08■■■□□ 2.25
TVP23A-206ENST00000572980 TMX4Q9H1E5 349 aaPredicted RBP29.08■■■□□ 2.25
TVP23A-206ENST00000572980 TAF1P21675 1872 aa29.07■■■□□ 2.24
TVP23A-206ENST00000572980 SRGAP3O43295 1099 aa29.07■■■□□ 2.24
TVP23A-206ENST00000572980 PELP1Q8IZL8 1130 aaKnown RBP29.07■■■□□ 2.24
TVP23A-206ENST00000572980 CACNA1SQ13698 1873 aa29.07■■■□□ 2.24
TVP23A-206ENST00000572980 SLX4Q8IY92 1834 aa29.06■■■□□ 2.24
TVP23A-206ENST00000572980 AAMPQ13685 434 aa29.06■■■□□ 2.24
TVP23A-206ENST00000572980 MPHOSPH8Q99549 860 aa29.06■■■□□ 2.24
TVP23A-206ENST00000572980 ATP8B2P98198 1209 aa29.05■■■□□ 2.24
TVP23A-206ENST00000572980 C21orf2O43822 256 aa29.05■■■□□ 2.24
TVP23A-206ENST00000572980 IRX6P78412 446 aaPredicted RBP29.05■■■□□ 2.24
TVP23A-206ENST00000572980 RPAP2Q8IXW5 612 aaPredicted RBP29.05■■■□□ 2.24
TVP23A-206ENST00000572980 ATP6V0A2Q9Y487 856 aa29.05■■■□□ 2.24
TVP23A-206ENST00000572980 GPR162Q16538 588 aa29.04■■■□□ 2.24
TVP23A-206ENST00000572980 SOGA3Q5TF21 947 aa29.04■■■□□ 2.24
TVP23A-206ENST00000572980 CEP85Q6P2H3 762 aa29.04■■■□□ 2.24
TVP23A-206ENST00000572980 SP8Q8IXZ3 490 aa29.04■■■□□ 2.24
TVP23A-206ENST00000572980 C7orf43Q8WVR3 580 aa29.04■■■□□ 2.24
TVP23A-206ENST00000572980 BSDC1Q9NW68 430 aaPredicted RBP29.04■■■□□ 2.24
TVP23A-206ENST00000572980 ZNF219Q9P2Y4 722 aaPredicted RBP29.04■■■□□ 2.24
TVP23A-206ENST00000572980 CC2D2BQ6DHV5 1058 aa29.03■■■□□ 2.24
TVP23A-206ENST00000572980 PNMA6EA0A0J9YXQ4 647 aa29.02■■■□□ 2.24
TVP23A-206ENST00000572980 LDHAL6AQ6ZMR3 332 aa29.02■■■□□ 2.24
TVP23A-206ENST00000572980 EXOC6Q8TAG9 804 aa29.02■■■□□ 2.24
TVP23A-206ENST00000572980 ZNF594Q96JF6 807 aaPredicted RBP29.02■■■□□ 2.24
TVP23A-206ENST00000572980 RFX5P48382 616 aaPredicted RBP29.01■■■□□ 2.24
TVP23A-206ENST00000572980 ARFGEF1Q9Y6D6 1849 aa29.01■■■□□ 2.23
TVP23A-206ENST00000572980 DCAF8L1A6NGE4 600 aa29.01■■■□□ 2.23
TVP23A-206ENST00000572980 GRIPAP1Q4V328 841 aa29.01■■■□□ 2.23
TVP23A-206ENST00000572980 COL4A1P02462 1669 aa29■■■□□ 2.23
TVP23A-206ENST00000572980 YBX3P16989 372 aaKnown RBP eCLIP29■■■□□ 2.23
TVP23A-206ENST00000572980 PTPN12Q05209 780 aaKnown RBP29■■■□□ 2.23
TVP23A-206ENST00000572980 SSH3Q8TE77 659 aa29■■■□□ 2.23
TVP23A-206ENST00000572980 CNNM1Q9NRU3 951 aa29■■■□□ 2.23
TVP23A-206ENST00000572980 CCDC93Q567U6 631 aa28.99■■■□□ 2.23
TVP23A-206ENST00000572980 HMMRO75330 724 aa28.98■■■□□ 2.23
TVP23A-206ENST00000572980 POLA2Q14181 598 aa28.98■■■□□ 2.23
TVP23A-206ENST00000572980 KLHDC4Q8TBB5 520 aa28.98■■■□□ 2.23
TVP23A-206ENST00000572980 COPRSQ9NQ92 184 aa28.98■■■□□ 2.23
TVP23A-206ENST00000572980 GRIN3BO60391 1043 aa28.97■■■□□ 2.23
TVP23A-206ENST00000572980 RTKN2Q8IZC4 609 aa28.97■■■□□ 2.23
TVP23A-206ENST00000572980 FBXO3Q9UK99 471 aa28.97■■■□□ 2.23
TVP23A-206ENST00000572980 NEFLP07196 543 aa28.96■■■□□ 2.23
TVP23A-206ENST00000572980 OLFM4Q6UX06 510 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms