RNA–Protein interactions for RNA: ENST00000572845.1

TVP23B-205, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 483 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-205ENST00000572845 C11orf91Q3C1V1 193 aa6.58□□□□□ -1.36
TVP23B-205ENST00000572845 PERM1Q5SV97 790 aa6.58□□□□□ -1.36
TVP23B-205ENST00000572845 ANKMY2Q8IV38 441 aa6.58□□□□□ -1.36
TVP23B-205ENST00000572845 VRTNQ9H8Y1 702 aa6.58□□□□□ -1.36
TVP23B-205ENST00000572845 RNF112Q9ULX5 631 aa6.58□□□□□ -1.36
TVP23B-205ENST00000572845 MICAL2O94851 1124 aa6.57□□□□□ -1.36
TVP23B-205ENST00000572845 RARAP10276 462 aa6.57□□□□□ -1.36
TVP23B-205ENST00000572845 NRLP54845 237 aa6.57□□□□□ -1.36
TVP23B-205ENST00000572845 GRIK5Q16478 980 aa6.57□□□□□ -1.36
TVP23B-205ENST00000572845 MYO19Q96H55 970 aa6.57□□□□□ -1.36
TVP23B-205ENST00000572845 SRA1Q9HD15 236 aaKnown RBP6.57□□□□□ -1.36
TVP23B-205ENST00000572845 EGFRP00533 1210 aa6.56□□□□□ -1.36
TVP23B-205ENST00000572845 TARSP26639 723 aaKnown RBP6.56□□□□□ -1.36
TVP23B-205ENST00000572845 IREB2P48200 963 aaKnown RBP6.56□□□□□ -1.36
TVP23B-205ENST00000572845 DGKZQ13574 1117 aa6.56□□□□□ -1.36
TVP23B-205ENST00000572845 CRTC2Q53ET0 693 aaPredicted RBP6.56□□□□□ -1.36
TVP23B-205ENST00000572845 KANK4Q5T7N3 995 aaPredicted RBP6.56□□□□□ -1.36
TVP23B-205ENST00000572845 PROSER2Q86WR7 435 aaPredicted RBP6.56□□□□□ -1.36
TVP23B-205ENST00000572845 MAP4K3Q8IVH8 894 aa6.56□□□□□ -1.36
TVP23B-205ENST00000572845 CACTIN-AS1Q8N1I8 211 aa6.56□□□□□ -1.36
TVP23B-205ENST00000572845 FNBP4Q8N3X1 1017 aaPredicted RBP6.56□□□□□ -1.36
TVP23B-205ENST00000572845 IFT43Q96FT9 208 aa6.56□□□□□ -1.36
TVP23B-205ENST00000572845 CALR3Q96L12 384 aaKnown RBP6.56□□□□□ -1.36
TVP23B-205ENST00000572845 PPP1R12CQ9BZL4 782 aa6.56□□□□□ -1.36
TVP23B-205ENST00000572845 KLK14Q9P0G3 267 aa6.56□□□□□ -1.36
TVP23B-205ENST00000572845 ZFATQ9P243 1243 aa6.56□□□□□ -1.36
TVP23B-205ENST00000572845 KRTAP9-6A0A140TA67 174 aa6.55□□□□□ -1.36
TVP23B-205ENST00000572845 ZBTB42B2RXF5 422 aa6.55□□□□□ -1.36
TVP23B-205ENST00000572845 SASH3O75995 380 aa6.55□□□□□ -1.36
TVP23B-205ENST00000572845 NOS3P29474 1203 aa6.55□□□□□ -1.36
TVP23B-205ENST00000572845 TMEM130Q8N3G9 435 aa6.55□□□□□ -1.36
TVP23B-205ENST00000572845 RBSNQ9H1K0 784 aa6.55□□□□□ -1.36
TVP23B-205ENST00000572845 TLR7Q9NYK1 1049 aaKnown RBP6.55□□□□□ -1.36
TVP23B-205ENST00000572845 USP17L15C9J2P7 530 aa6.54□□□□□ -1.36
TVP23B-205ENST00000572845 USP17L10C9JJH3 530 aa6.54□□□□□ -1.36
TVP23B-205ENST00000572845 USP17L13C9JLJ4 530 aa6.54□□□□□ -1.36
TVP23B-205ENST00000572845 USP17L12C9JPN9 530 aa6.54□□□□□ -1.36
TVP23B-205ENST00000572845 USP17L11C9JVI0 530 aa6.54□□□□□ -1.36
TVP23B-205ENST00000572845 USP17L21D6R901 530 aa6.54□□□□□ -1.36
TVP23B-205ENST00000572845 USP17L18D6R9N7 530 aa6.54□□□□□ -1.36
TVP23B-205ENST00000572845 USP17L22D6RA61 530 aa6.54□□□□□ -1.36
TVP23B-205ENST00000572845 USP17L17D6RBQ6 530 aa6.54□□□□□ -1.36
TVP23B-205ENST00000572845 USP17L19D6RCP7 530 aa6.54□□□□□ -1.36
TVP23B-205ENST00000572845 USP17L20D6RJB6 530 aa6.54□□□□□ -1.36
TVP23B-205ENST00000572845 PSAPP07602 524 aa6.54□□□□□ -1.36
TVP23B-205ENST00000572845 WEE1P30291 646 aa6.54□□□□□ -1.36
TVP23B-205ENST00000572845 PLAURQ03405 335 aa6.54□□□□□ -1.36
TVP23B-205ENST00000572845 USP17L24Q0WX57 530 aa6.54□□□□□ -1.36
TVP23B-205ENST00000572845 KRT25Q7Z3Z0 450 aa6.54□□□□□ -1.36
TVP23B-205ENST00000572845 MRPL18Q9H0U6 180 aaKnown RBP6.54□□□□□ -1.36
TVP23B-205ENST00000572845 SMG9Q9H0W8 520 aaKnown RBP6.54□□□□□ -1.36
TVP23B-205ENST00000572845 MUC3BQ9H195 1237 aa6.54□□□□□ -1.36
TVP23B-205ENST00000572845 AKTIPQ9H8T0 292 aa6.54□□□□□ -1.36
TVP23B-205ENST00000572845 LOC102724428A0A0B4J2F2 783 aa6.53□□□□□ -1.36
TVP23B-205ENST00000572845 DLL1O00548 723 aa6.53□□□□□ -1.36
TVP23B-205ENST00000572845 EIF2AK2P19525 551 aaKnown RBP6.53□□□□□ -1.36
TVP23B-205ENST00000572845 GRNP28799 593 aaKnown RBP6.53□□□□□ -1.36
TVP23B-205ENST00000572845 SIK1P57059 783 aa6.53□□□□□ -1.36
TVP23B-205ENST00000572845 PRR23CQ6ZRP0 262 aa6.53□□□□□ -1.36
TVP23B-205ENST00000572845 QTRT2Q9H974 415 aaKnown RBP6.53□□□□□ -1.36
TVP23B-205ENST00000572845 RTCBQ9Y3I0 505 aaKnown RBP6.53□□□□□ -1.36
TVP23B-205ENST00000572845 XYLBO75191 536 aa6.52□□□□□ -1.37
TVP23B-205ENST00000572845 GHRHP01286 108 aa6.52□□□□□ -1.37
TVP23B-205ENST00000572845 LMOD1P29536 600 aaPredicted RBP6.52□□□□□ -1.37
TVP23B-205ENST00000572845 SOX18P35713 384 aa6.52□□□□□ -1.37
TVP23B-205ENST00000572845 MLLT1Q03111 559 aaPredicted RBP6.52□□□□□ -1.37
TVP23B-205ENST00000572845 DZIP1LQ8IYY4 767 aaKnown RBP6.52□□□□□ -1.37
TVP23B-205ENST00000572845 FAM200AQ8TCP9 573 aa6.52□□□□□ -1.37
TVP23B-205ENST00000572845 OPLAHO14841 1288 aa6.51□□□□□ -1.37
TVP23B-205ENST00000572845 DEAF1O75398 565 aaPredicted RBP6.51□□□□□ -1.37
TVP23B-205ENST00000572845 PLD4Q96BZ4 506 aa6.51□□□□□ -1.37
TVP23B-205ENST00000572845 MEGF10Q96KG7 1140 aa6.51□□□□□ -1.37
TVP23B-205ENST00000572845 A6NJR5 290 aa6.5□□□□□ -1.37
TVP23B-205ENST00000572845 GSC2O15499 205 aa6.5□□□□□ -1.37
TVP23B-205ENST00000572845 HOXD8P13378 290 aaPredicted RBP6.5□□□□□ -1.37
TVP23B-205ENST00000572845 HFE2Q6ZVN8 426 aa6.5□□□□□ -1.37
TVP23B-205ENST00000572845 CMTR1Q8N1G2 835 aaKnown RBP6.5□□□□□ -1.37
TVP23B-205ENST00000572845 CLUAP1Q96AJ1 413 aa6.5□□□□□ -1.37
TVP23B-205ENST00000572845 ARXQ96QS3 562 aa6.5□□□□□ -1.37
TVP23B-205ENST00000572845 PTCD1O75127 700 aaKnown RBP6.49□□□□□ -1.37
TVP23B-205ENST00000572845 TREML1Q86YW5 311 aa6.49□□□□□ -1.37
TVP23B-205ENST00000572845 IL22RA1Q8N6P7 574 aa6.49□□□□□ -1.37
TVP23B-205ENST00000572845 PCMTD2Q9NV79 361 aa6.49□□□□□ -1.37
TVP23B-205ENST00000572845 FAM13BQ9NYF5 915 aa6.49□□□□□ -1.37
TVP23B-205ENST00000572845 F8W735 103 aaPredicted RBP6.48□□□□□ -1.37
TVP23B-205ENST00000572845 LGR5O75473 907 aa6.48□□□□□ -1.37
TVP23B-205ENST00000572845 FSTP19883 344 aa6.48□□□□□ -1.37
TVP23B-205ENST00000572845 GDF6Q6KF10 455 aaPredicted RBP6.48□□□□□ -1.37
TVP23B-205ENST00000572845 RGL4Q8IZJ4 473 aa6.48□□□□□ -1.37
TVP23B-205ENST00000572845 J3QW42 95 aa6.47□□□□□ -1.37
TVP23B-205ENST00000572845 MMP20O60882 483 aa6.47□□□□□ -1.37
TVP23B-205ENST00000572845 BRD2P25440 801 aaKnown RBP6.47□□□□□ -1.37
TVP23B-205ENST00000572845 NLRP13Q86W25 1043 aa6.47□□□□□ -1.37
TVP23B-205ENST00000572845 PPME1Q9Y570 386 aa6.47□□□□□ -1.37
TVP23B-205ENST00000572845 RFX1P22670 979 aa6.46□□□□□ -1.38
TVP23B-205ENST00000572845 SWI5Q1ZZU3 235 aa6.46□□□□□ -1.38
TVP23B-205ENST00000572845 Q6ZS46 218 aa6.46□□□□□ -1.38
TVP23B-205ENST00000572845 KRTAP1-3Q8IUG1 177 aa6.46□□□□□ -1.38
TVP23B-205ENST00000572845 SPACA7Q96KW9 195 aa6.46□□□□□ -1.38
TVP23B-205ENST00000572845 LRFN2Q9ULH4 789 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms