RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 CCDC152Q4G0S7 254 aa26.28■■□□□ 1.8
CHMP6-204ENST00000572778 SLC4A10Q6U841 1118 aa26.28■■□□□ 1.8
CHMP6-204ENST00000572778 SP8Q8IXZ3 490 aa26.28■■□□□ 1.8
CHMP6-204ENST00000572778 CELF1Q92879 486 aaKnown RBP26.28■■□□□ 1.8
CHMP6-204ENST00000572778 CCDC85AQ96PX6 553 aaPredicted RBP26.28■■□□□ 1.8
CHMP6-204ENST00000572778 DDX60Q8IY21 1712 aaKnown RBP26.28■■□□□ 1.8
CHMP6-204ENST00000572778 CT47B1P0C2W7 299 aaPredicted RBP26.27■■□□□ 1.8
CHMP6-204ENST00000572778 BEND3Q5T5X7 828 aa26.27■■□□□ 1.8
CHMP6-204ENST00000572778 PSMD1Q99460 953 aa26.27■■□□□ 1.8
CHMP6-204ENST00000572778 SBF1O95248 1867 aa26.26■■□□□ 1.79
CHMP6-204ENST00000572778 LAMB2P55268 1798 aa26.26■■□□□ 1.79
CHMP6-204ENST00000572778 KDM2BQ8NHM5 1336 aa26.26■■□□□ 1.79
CHMP6-204ENST00000572778 ALDH1L2Q3SY69 923 aa26.26■■□□□ 1.79
CHMP6-204ENST00000572778 SMC4Q9NTJ3 1288 aa26.26■■□□□ 1.79
CHMP6-204ENST00000572778 IARSP41252 1262 aaKnown RBP26.25■■□□□ 1.79
CHMP6-204ENST00000572778 TMC4Q7Z404 712 aa26.25■■□□□ 1.79
CHMP6-204ENST00000572778 SEC31BQ9NQW1 1179 aa26.25■■□□□ 1.79
CHMP6-204ENST00000572778 SNED1Q8TER0 1413 aa26.24■■□□□ 1.79
CHMP6-204ENST00000572778 CTSWP56202 376 aa26.24■■□□□ 1.79
CHMP6-204ENST00000572778 NMRK2Q9NPI5 230 aa26.24■■□□□ 1.79
CHMP6-204ENST00000572778 CACNA1FO60840 1977 aa26.24■■□□□ 1.79
CHMP6-204ENST00000572778 PTPRCP08575 1304 aa26.23■■□□□ 1.79
CHMP6-204ENST00000572778 RPS8P62241 208 aaKnown RBP26.23■■□□□ 1.79
CHMP6-204ENST00000572778 DPY19L2Q6NUT2 758 aa26.23■■□□□ 1.79
CHMP6-204ENST00000572778 GLTPD2A6NH11 291 aa26.22■■□□□ 1.79
CHMP6-204ENST00000572778 DPP8Q6V1X1 898 aaPredicted RBP26.22■■□□□ 1.79
CHMP6-204ENST00000572778 MPNDQ8N594 471 aa26.22■■□□□ 1.79
CHMP6-204ENST00000572778 SRCIN1Q9C0H9 1055 aa26.22■■□□□ 1.79
CHMP6-204ENST00000572778 CASP7P55210 303 aa26.21■■□□□ 1.79
CHMP6-204ENST00000572778 TTLL11Q8NHH1 800 aa26.21■■□□□ 1.79
CHMP6-204ENST00000572778 KIF3CO14782 793 aa26.2■■□□□ 1.78
CHMP6-204ENST00000572778 ALDH1L1O75891 902 aa26.2■■□□□ 1.78
CHMP6-204ENST00000572778 SUPT20HQ8NEM7 779 aa26.2■■□□□ 1.78
CHMP6-204ENST00000572778 RRAGCQ9HB90 399 aa26.2■■□□□ 1.78
CHMP6-204ENST00000572778 LARGE2Q8N3Y3 721 aa26.19■■□□□ 1.78
CHMP6-204ENST00000572778 JDP2Q8WYK2 163 aa26.19■■□□□ 1.78
CHMP6-204ENST00000572778 PLA2G12BQ9BX93 195 aa26.19■■□□□ 1.78
CHMP6-204ENST00000572778 GREM2Q9H772 168 aa26.19■■□□□ 1.78
CHMP6-204ENST00000572778 C9orf78Q9NZ63 289 aaPredicted RBP26.19■■□□□ 1.78
CHMP6-204ENST00000572778 ANKRD18AQ8IVF6 992 aa26.18■■□□□ 1.78
CHMP6-204ENST00000572778 NSFL1CQ9UNZ2 370 aaKnown RBP26.18■■□□□ 1.78
CHMP6-204ENST00000572778 CCDC88AQ3V6T2 1871 aa26.17■■□□□ 1.78
CHMP6-204ENST00000572778 TIAM2Q8IVF5 1701 aa26.17■■□□□ 1.78
CHMP6-204ENST00000572778 GRM8O00222 908 aa26.17■■□□□ 1.78
CHMP6-204ENST00000572778 PPIP5K2O43314 1243 aa26.17■■□□□ 1.78
CHMP6-204ENST00000572778 RARSP54136 660 aaKnown RBP26.17■■□□□ 1.78
CHMP6-204ENST00000572778 C1QTNF8P60827 252 aa26.17■■□□□ 1.78
CHMP6-204ENST00000572778 CDC5LQ99459 802 aaKnown RBP26.17■■□□□ 1.78
CHMP6-204ENST00000572778 RTFDC1Q9BY42 306 aaPredicted RBP26.17■■□□□ 1.78
CHMP6-204ENST00000572778 AOC3Q16853 763 aa26.16■■□□□ 1.78
CHMP6-204ENST00000572778 NOB1Q9ULX3 412 aaKnown RBP26.16■■□□□ 1.78
CHMP6-204ENST00000572778 COL4A1P02462 1669 aa26.15■■□□□ 1.78
CHMP6-204ENST00000572778 ZBED9Q6R2W3 1325 aa26.15■■□□□ 1.78
CHMP6-204ENST00000572778 DDNO94850 711 aaPredicted RBP26.15■■□□□ 1.78
CHMP6-204ENST00000572778 GPSM2P81274 684 aa26.15■■□□□ 1.78
CHMP6-204ENST00000572778 TAF1P21675 1872 aa26.15■■□□□ 1.78
CHMP6-204ENST00000572778 C16orf71Q8IYS4 520 aaPredicted RBP26.14■■□□□ 1.78
CHMP6-204ENST00000572778 VPS33BQ9H267 617 aa26.14■■□□□ 1.78
CHMP6-204ENST00000572778 FZD9O00144 591 aa26.13■■□□□ 1.77
CHMP6-204ENST00000572778 CSF1RP07333 972 aa26.13■■□□□ 1.77
CHMP6-204ENST00000572778 NIM1KQ8IY84 436 aa26.13■■□□□ 1.77
CHMP6-204ENST00000572778 ZNF541Q9H0D2 1346 aa26.13■■□□□ 1.77
CHMP6-204ENST00000572778 RTL9Q8NET4 1388 aa26.12■■□□□ 1.77
CHMP6-204ENST00000572778 C6orf229H3BNL8 230 aa26.12■■□□□ 1.77
CHMP6-204ENST00000572778 VEGFAP15692 232 aaPredicted RBP26.12■■□□□ 1.77
CHMP6-204ENST00000572778 ITGA6P23229 1130 aa26.12■■□□□ 1.77
CHMP6-204ENST00000572778 BRPF1P55201 1214 aaPredicted RBP26.12■■□□□ 1.77
CHMP6-204ENST00000572778 EIF6P56537 245 aaKnown RBP26.12■■□□□ 1.77
CHMP6-204ENST00000572778 FOXO4P98177 505 aa26.12■■□□□ 1.77
CHMP6-204ENST00000572778 FAM161AQ3B820 660 aa26.12■■□□□ 1.77
CHMP6-204ENST00000572778 ANKIB1Q9P2G1 1089 aa26.12■■□□□ 1.77
CHMP6-204ENST00000572778 CHMP3Q9Y3E7 222 aa26.12■■□□□ 1.77
CHMP6-204ENST00000572778 DICER1Q9UPY3 1922 aaKnown RBP26.11■■□□□ 1.77
CHMP6-204ENST00000572778 TOMM70O94826 608 aa26.1■■□□□ 1.77
CHMP6-204ENST00000572778 IGHMBP2P38935 993 aaKnown RBP26.1■■□□□ 1.77
CHMP6-204ENST00000572778 KIAA2012Q0VF49 1180 aa26.1■■□□□ 1.77
CHMP6-204ENST00000572778 API5Q9BZZ5 524 aaKnown RBP26.1■■□□□ 1.77
CHMP6-204ENST00000572778 POLLQ9UGP5 575 aa26.1■■□□□ 1.77
CHMP6-204ENST00000572778 NBPF7P0C2Y1 421 aaPredicted RBP26.09■■□□□ 1.77
CHMP6-204ENST00000572778 WASHC4Q2M389 1173 aa26.09■■□□□ 1.77
CHMP6-204ENST00000572778 EPHA10Q5JZY3 1008 aa26.09■■□□□ 1.77
CHMP6-204ENST00000572778 LMBR1LQ6UX01 489 aa26.09■■□□□ 1.77
CHMP6-204ENST00000572778 BSDC1Q9NW68 430 aaPredicted RBP26.09■■□□□ 1.77
CHMP6-204ENST00000572778 KIF16BQ96L93 1317 aa26.09■■□□□ 1.77
CHMP6-204ENST00000572778 COL4A5P29400 1685 aa26.09■■□□□ 1.77
CHMP6-204ENST00000572778 ANKRD18BA2A2Z9 1011 aa26.08■■□□□ 1.77
CHMP6-204ENST00000572778 RIMBP2O15034 1052 aa26.08■■□□□ 1.77
CHMP6-204ENST00000572778 TBC1D16Q8TBP0 767 aa26.08■■□□□ 1.77
CHMP6-204ENST00000572778 SUCLG2Q96I99 432 aa26.08■■□□□ 1.77
CHMP6-204ENST00000572778 PODXL2Q9NZ53 605 aa26.08■■□□□ 1.77
CHMP6-204ENST00000572778 GJA3Q9Y6H8 435 aa26.08■■□□□ 1.77
CHMP6-204ENST00000572778 POTECB2RU33 542 aa26.07■■□□□ 1.76
CHMP6-204ENST00000572778 IFIT5Q13325 482 aaKnown RBP26.07■■□□□ 1.76
CHMP6-204ENST00000572778 EYA3Q99504 573 aa26.07■■□□□ 1.76
CHMP6-204ENST00000572778 MPHOSPH8Q99549 860 aa26.07■■□□□ 1.76
CHMP6-204ENST00000572778 GGA1Q9UJY5 639 aa26.07■■□□□ 1.76
CHMP6-204ENST00000572778 ZNRF3Q9ULT6 936 aa26.07■■□□□ 1.76
CHMP6-204ENST00000572778 LRRC37AA6NMS7 1700 aa26.07■■□□□ 1.76
CHMP6-204ENST00000572778 UTYO14607 1347 aa26.07■■□□□ 1.76
CHMP6-204ENST00000572778 BCAR3O75815 825 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms