RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 CASP7P55210 303 aa20.47■□□□□ 0.87
LITAF-210ENST00000571976 CTSWP56202 376 aa20.47■□□□□ 0.87
LITAF-210ENST00000571976 GRIPAP1Q4V328 841 aa20.47■□□□□ 0.87
LITAF-210ENST00000571976 RTKN2Q8IZC4 609 aa20.47■□□□□ 0.87
LITAF-210ENST00000571976 TMX4Q9H1E5 349 aaPredicted RBP20.47■□□□□ 0.87
LITAF-210ENST00000571976 C9orf78Q9NZ63 289 aaPredicted RBP20.47■□□□□ 0.87
LITAF-210ENST00000571976 IPO8O15397 1037 aaKnown RBP20.46■□□□□ 0.87
LITAF-210ENST00000571976 BCAR3O75815 825 aa20.46■□□□□ 0.87
LITAF-210ENST00000571976 RASSF7Q02833 373 aa20.46■□□□□ 0.87
LITAF-210ENST00000571976 TMC4Q7Z404 712 aa20.46■□□□□ 0.87
LITAF-210ENST00000571976 PLA2G12BQ9BX93 195 aa20.46■□□□□ 0.87
LITAF-210ENST00000571976 TAOK3Q9H2K8 898 aa20.46■□□□□ 0.87
LITAF-210ENST00000571976 ATP6V0A2Q9Y487 856 aa20.46■□□□□ 0.87
LITAF-210ENST00000571976 LTBP3Q9NS15 1303 aa20.46■□□□□ 0.87
LITAF-210ENST00000571976 LMNB1P20700 586 aa20.45■□□□□ 0.86
LITAF-210ENST00000571976 C9orf131Q5VYM1 1079 aa20.45■□□□□ 0.86
LITAF-210ENST00000571976 OLFM4Q6UX06 510 aa20.45■□□□□ 0.86
LITAF-210ENST00000571976 TTLL11Q8NHH1 800 aa20.45■□□□□ 0.86
LITAF-210ENST00000571976 FER1L6Q2WGJ9 1857 aa20.44■□□□□ 0.86
LITAF-210ENST00000571976 SP8Q8IXZ3 490 aa20.44■□□□□ 0.86
LITAF-210ENST00000571976 CCT4P50991 539 aaKnown RBP20.43■□□□□ 0.86
LITAF-210ENST00000571976 RPS8P62241 208 aaKnown RBP20.43■□□□□ 0.86
LITAF-210ENST00000571976 FKBP4Q02790 459 aaKnown RBP eCLIP20.43■□□□□ 0.86
LITAF-210ENST00000571976 FRAT1Q92837 279 aaPredicted RBP20.43■□□□□ 0.86
LITAF-210ENST00000571976 CELF1Q92879 486 aaKnown RBP20.43■□□□□ 0.86
LITAF-210ENST00000571976 CCDC85AQ96PX6 553 aaPredicted RBP20.43■□□□□ 0.86
LITAF-210ENST00000571976 RNF181Q9P0P0 153 aa20.43■□□□□ 0.86
LITAF-210ENST00000571976 UTYO14607 1347 aa20.43■□□□□ 0.86
LITAF-210ENST00000571976 CSF1RP07333 972 aa20.42■□□□□ 0.86
LITAF-210ENST00000571976 SEC31BQ9NQW1 1179 aa20.42■□□□□ 0.86
LITAF-210ENST00000571976 PRELPP51888 382 aa20.41■□□□□ 0.86
LITAF-210ENST00000571976 ATF7IPQ6VMQ6 1270 aa20.41■□□□□ 0.86
LITAF-210ENST00000571976 PSMD1Q99460 953 aa20.41■□□□□ 0.86
LITAF-210ENST00000571976 GREM2Q9H772 168 aa20.41■□□□□ 0.86
LITAF-210ENST00000571976 RTL9Q8NET4 1388 aa20.41■□□□□ 0.86
LITAF-210ENST00000571976 SBF1O95248 1867 aa20.41■□□□□ 0.86
LITAF-210ENST00000571976 MYH3P11055 1940 aa20.4■□□□□ 0.86
LITAF-210ENST00000571976 TAF1P21675 1872 aa20.4■□□□□ 0.86
LITAF-210ENST00000571976 FOXO4P98177 505 aa20.4■□□□□ 0.86
LITAF-210ENST00000571976 SNED1Q8TER0 1413 aa20.4■□□□□ 0.86
LITAF-210ENST00000571976 CDC5LQ99459 802 aaKnown RBP20.4■□□□□ 0.86
LITAF-210ENST00000571976 NBPF7P0C2Y1 421 aaPredicted RBP20.39■□□□□ 0.85
LITAF-210ENST00000571976 TRIM27P14373 513 aa20.39■□□□□ 0.85
LITAF-210ENST00000571976 ZKSCAN2Q63HK3 967 aa20.39■□□□□ 0.85
LITAF-210ENST00000571976 ANKRD18AQ8IVF6 992 aa20.39■□□□□ 0.85
LITAF-210ENST00000571976 USP44Q9H0E7 712 aa20.39■□□□□ 0.85
LITAF-210ENST00000571976 ZC3H4Q9UPT8 1303 aaKnown RBP20.38■□□□□ 0.85
LITAF-210ENST00000571976 MPNDQ8N594 471 aa20.38■□□□□ 0.85
LITAF-210ENST00000571976 YTHDC1Q96MU7 727 aaKnown RBP20.38■□□□□ 0.85
LITAF-210ENST00000571976 ZNF277Q9NRM2 450 aaPredicted RBP20.38■□□□□ 0.85
LITAF-210ENST00000571976 ITGA6P23229 1130 aa20.37■□□□□ 0.85
LITAF-210ENST00000571976 INTS3Q68E01 1043 aaKnown RBP20.37■□□□□ 0.85
LITAF-210ENST00000571976 LMBR1LQ6UX01 489 aa20.37■□□□□ 0.85
LITAF-210ENST00000571976 DPP8Q6V1X1 898 aaPredicted RBP20.37■□□□□ 0.85
LITAF-210ENST00000571976 SLC51AQ86UW1 340 aa20.37■□□□□ 0.85
LITAF-210ENST00000571976 ZNF784Q8NCA9 323 aaPredicted RBP20.37■□□□□ 0.85
LITAF-210ENST00000571976 SUCLG2Q96I99 432 aa20.37■□□□□ 0.85
LITAF-210ENST00000571976 FAM161AQ3B820 660 aa20.36■□□□□ 0.85
LITAF-210ENST00000571976 EPHA10Q5JZY3 1008 aa20.36■□□□□ 0.85
LITAF-210ENST00000571976 SUPT20HQ8NEM7 779 aa20.36■□□□□ 0.85
LITAF-210ENST00000571976 RTFDC1Q9BY42 306 aaPredicted RBP20.36■□□□□ 0.85
LITAF-210ENST00000571976 COL4A1P02462 1669 aa20.35■□□□□ 0.85
LITAF-210ENST00000571976 CCDC88AQ3V6T2 1871 aa20.35■□□□□ 0.85
LITAF-210ENST00000571976 ANKRD18BA2A2Z9 1011 aa20.35■□□□□ 0.85
LITAF-210ENST00000571976 IGHMBP2P38935 993 aaKnown RBP20.35■□□□□ 0.85
LITAF-210ENST00000571976 IARSP41252 1262 aaKnown RBP20.35■□□□□ 0.85
LITAF-210ENST00000571976 IFIT5Q13325 482 aaKnown RBP20.35■□□□□ 0.85
LITAF-210ENST00000571976 KAZALD1Q96I82 304 aa20.35■□□□□ 0.85
LITAF-210ENST00000571976 VPS33BQ9H267 617 aa20.35■□□□□ 0.85
LITAF-210ENST00000571976 RCAN3Q9UKA8 241 aa20.35■□□□□ 0.85
LITAF-210ENST00000571976 NSFL1CQ9UNZ2 370 aaKnown RBP20.35■□□□□ 0.85
LITAF-210ENST00000571976 LRRC37AA6NMS7 1700 aa20.34■□□□□ 0.85
LITAF-210ENST00000571976 CCDC57Q2TAC2 916 aa20.34■□□□□ 0.85
LITAF-210ENST00000571976 CLUAP1Q96AJ1 413 aa20.34■□□□□ 0.85
LITAF-210ENST00000571976 BSDC1Q9NW68 430 aaPredicted RBP20.34■□□□□ 0.85
LITAF-210ENST00000571976 HDAC5Q9UQL6 1122 aa20.34■□□□□ 0.85
LITAF-210ENST00000571976 CHMP3Q9Y3E7 222 aa20.34■□□□□ 0.85
LITAF-210ENST00000571976 UBTFL1P0CB47 393 aaPredicted RBP20.33■□□□□ 0.85
LITAF-210ENST00000571976 BICC1Q9H694 974 aaKnown RBP20.33■□□□□ 0.85
LITAF-210ENST00000571976 TNNQ9UQP3 1299 aa20.33■□□□□ 0.85
LITAF-210ENST00000571976 DICER1Q9UPY3 1922 aaKnown RBP20.32■□□□□ 0.84
LITAF-210ENST00000571976 GPSM2P81274 684 aa20.32■□□□□ 0.84
LITAF-210ENST00000571976 RABL6Q3YEC7 729 aaPredicted RBP20.32■□□□□ 0.84
LITAF-210ENST00000571976 MPHOSPH8Q99549 860 aa20.32■□□□□ 0.84
LITAF-210ENST00000571976 PODXL2Q9NZ53 605 aa20.32■□□□□ 0.84
LITAF-210ENST00000571976 FTSJ3Q8IY81 847 aaKnown RBP20.31■□□□□ 0.84
LITAF-210ENST00000571976 LARGE2Q8N3Y3 721 aa20.31■□□□□ 0.84
LITAF-210ENST00000571976 JDP2Q8WYK2 163 aa20.31■□□□□ 0.84
LITAF-210ENST00000571976 ANKIB1Q9P2G1 1089 aa20.31■□□□□ 0.84
LITAF-210ENST00000571976 MINPP1Q9UNW1 487 aa20.31■□□□□ 0.84
LITAF-210ENST00000571976 PPIP5K2O43314 1243 aa20.3■□□□□ 0.84
LITAF-210ENST00000571976 GNAI3P08754 354 aa20.3■□□□□ 0.84
LITAF-210ENST00000571976 DPY19L2Q6NUT2 758 aa20.3■□□□□ 0.84
LITAF-210ENST00000571976 DZIP1LQ8IYY4 767 aaKnown RBP20.3■□□□□ 0.84
LITAF-210ENST00000571976 ZNF526Q8TF50 670 aaPredicted RBP20.3■□□□□ 0.84
LITAF-210ENST00000571976 GPBP1L1Q9HC44 474 aaPredicted RBP20.3■□□□□ 0.84
LITAF-210ENST00000571976 TIAM2Q8IVF5 1701 aa20.3■□□□□ 0.84
LITAF-210ENST00000571976 XDHP47989 1333 aa20.29■□□□□ 0.84
LITAF-210ENST00000571976 KDM2BQ8NHM5 1336 aa20.29■□□□□ 0.84
LITAF-210ENST00000571976 GLTPD2A6NH11 291 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms