RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 ZNF541Q9H0D2 1346 aa18.61■□□□□ 0.57
LITAF-208ENST00000571627 BBOX1O75936 387 aa18.61■□□□□ 0.57
LITAF-208ENST00000571627 TOMM70O94826 608 aa18.61■□□□□ 0.57
LITAF-208ENST00000571627 NEXNQ0ZGT2 675 aa18.61■□□□□ 0.57
LITAF-208ENST00000571627 DPY19L2Q6NUT2 758 aa18.61■□□□□ 0.57
LITAF-208ENST00000571627 C16orf71Q8IYS4 520 aaPredicted RBP18.61■□□□□ 0.57
LITAF-208ENST00000571627 CELF1Q92879 486 aaKnown RBP18.61■□□□□ 0.57
LITAF-208ENST00000571627 SPEF2Q9C093 1822 aa18.6■□□□□ 0.57
LITAF-208ENST00000571627 NEURL1BA8MQ27 555 aa18.6■□□□□ 0.57
LITAF-208ENST00000571627 DDNO94850 711 aaPredicted RBP18.6■□□□□ 0.57
LITAF-208ENST00000571627 TMX4Q9H1E5 349 aaPredicted RBP18.6■□□□□ 0.57
LITAF-208ENST00000571627 DUOX1Q9NRD9 1551 aa18.59■□□□□ 0.57
LITAF-208ENST00000571627 CEP350Q5VT06 3117 aa18.59■□□□□ 0.57
LITAF-208ENST00000571627 POTECB2RU33 542 aa18.59■□□□□ 0.57
LITAF-208ENST00000571627 SP8Q8IXZ3 490 aa18.59■□□□□ 0.57
LITAF-208ENST00000571627 DNAAF4Q8WXU2 420 aa18.59■□□□□ 0.57
LITAF-208ENST00000571627 CDCA7LQ96GN5 454 aa18.59■□□□□ 0.57
LITAF-208ENST00000571627 CCDC85AQ96PX6 553 aaPredicted RBP18.59■□□□□ 0.57
LITAF-208ENST00000571627 E9PSI1 815 aa18.58■□□□□ 0.56
LITAF-208ENST00000571627 F6X3S4 739 aa18.58■□□□□ 0.56
LITAF-208ENST00000571627 PDE8AO60658 829 aa18.58■□□□□ 0.56
LITAF-208ENST00000571627 VEGFAP15692 232 aaPredicted RBP18.58■□□□□ 0.56
LITAF-208ENST00000571627 GRIPAP1Q4V328 841 aa18.58■□□□□ 0.56
LITAF-208ENST00000571627 LARGE2Q8N3Y3 721 aa18.58■□□□□ 0.56
LITAF-208ENST00000571627 SEC31BQ9NQW1 1179 aa18.58■□□□□ 0.56
LITAF-208ENST00000571627 CDHR2Q9BYE9 1310 aa18.57■□□□□ 0.56
LITAF-208ENST00000571627 SLFN5Q08AF3 891 aa18.57■□□□□ 0.56
LITAF-208ENST00000571627 AOC3Q16853 763 aa18.57■□□□□ 0.56
LITAF-208ENST00000571627 DPP8Q6V1X1 898 aaPredicted RBP18.57■□□□□ 0.56
LITAF-208ENST00000571627 UBE3BQ7Z3V4 1068 aa18.57■□□□□ 0.56
LITAF-208ENST00000571627 RBM46Q8TBY0 533 aaKnown RBP18.57■□□□□ 0.56
LITAF-208ENST00000571627 LTBP1Q14766 1721 aa18.57■□□□□ 0.56
LITAF-208ENST00000571627 SCN4AP35499 1836 aa18.56■□□□□ 0.56
LITAF-208ENST00000571627 FZD9O00144 591 aa18.56■□□□□ 0.56
LITAF-208ENST00000571627 PPIP5K2O43314 1243 aa18.56■□□□□ 0.56
LITAF-208ENST00000571627 HSP90B1P14625 803 aaKnown RBP18.56■□□□□ 0.56
LITAF-208ENST00000571627 MPNDQ8N594 471 aa18.56■□□□□ 0.56
LITAF-208ENST00000571627 JDP2Q8WYK2 163 aa18.56■□□□□ 0.56
LITAF-208ENST00000571627 HSPA6P17066 643 aa18.55■□□□□ 0.56
LITAF-208ENST00000571627 CTSWP56202 376 aa18.55■□□□□ 0.56
LITAF-208ENST00000571627 GCKRQ14397 625 aa18.55■□□□□ 0.56
LITAF-208ENST00000571627 CCDC152Q4G0S7 254 aa18.55■□□□□ 0.56
LITAF-208ENST00000571627 TMC4Q7Z404 712 aa18.55■□□□□ 0.56
LITAF-208ENST00000571627 LINS1Q8NG48 757 aa18.55■□□□□ 0.56
LITAF-208ENST00000571627 H7C1W4 665 aa18.54■□□□□ 0.56
LITAF-208ENST00000571627 RPS8P62241 208 aaKnown RBP18.54■□□□□ 0.56
LITAF-208ENST00000571627 RTFDC1Q9BY42 306 aaPredicted RBP18.54■□□□□ 0.56
LITAF-208ENST00000571627 NIM1KQ8IY84 436 aa18.53■□□□□ 0.56
LITAF-208ENST00000571627 SUPT20HQ8NEM7 779 aa18.53■□□□□ 0.56
LITAF-208ENST00000571627 GPSM2P81274 684 aa18.52■□□□□ 0.56
LITAF-208ENST00000571627 BEND3Q5T5X7 828 aa18.52■□□□□ 0.56
LITAF-208ENST00000571627 TTLL11Q8NHH1 800 aa18.52■□□□□ 0.56
LITAF-208ENST00000571627 L3MBTL3Q96JM7 780 aaPredicted RBP18.52■□□□□ 0.56
LITAF-208ENST00000571627 NSFL1CQ9UNZ2 370 aaKnown RBP18.52■□□□□ 0.56
LITAF-208ENST00000571627 GJA3Q9Y6H8 435 aa18.52■□□□□ 0.56
LITAF-208ENST00000571627 POTEIP0CG38 1075 aa18.51■□□□□ 0.55
LITAF-208ENST00000571627 POTEJP0CG39 1038 aa18.51■□□□□ 0.55
LITAF-208ENST00000571627 CASP7P55210 303 aa18.51■□□□□ 0.55
LITAF-208ENST00000571627 EIF6P56537 245 aaKnown RBP18.51■□□□□ 0.55
LITAF-208ENST00000571627 MRPL50Q8N5N7 158 aaKnown RBP18.51■□□□□ 0.55
LITAF-208ENST00000571627 BCL2L13Q9BXK5 485 aa18.51■□□□□ 0.55
LITAF-208ENST00000571627 GREM2Q9H772 168 aa18.51■□□□□ 0.55
LITAF-208ENST00000571627 KIAA2012Q0VF49 1180 aa18.5■□□□□ 0.55
LITAF-208ENST00000571627 FSTL1Q12841 308 aa18.5■□□□□ 0.55
LITAF-208ENST00000571627 SLC4A10Q6U841 1118 aa18.5■□□□□ 0.55
LITAF-208ENST00000571627 TRMT2AQ8IZ69 625 aaKnown RBP18.5■□□□□ 0.55
LITAF-208ENST00000571627 GPC2Q8N158 579 aa18.5■□□□□ 0.55
LITAF-208ENST00000571627 SMC1BQ8NDV3 1235 aa18.5■□□□□ 0.55
LITAF-208ENST00000571627 SSH1Q8WYL5 1049 aa18.5■□□□□ 0.55
LITAF-208ENST00000571627 GPR101Q96P66 508 aaPredicted RBP18.5■□□□□ 0.55
LITAF-208ENST00000571627 IQCA1LA6NCM1 817 aa18.49■□□□□ 0.55
LITAF-208ENST00000571627 C6orf229H3BNL8 230 aa18.49■□□□□ 0.55
LITAF-208ENST00000571627 ANKRD18AQ8IVF6 992 aa18.49■□□□□ 0.55
LITAF-208ENST00000571627 VPS33BQ9H267 617 aa18.49■□□□□ 0.55
LITAF-208ENST00000571627 TAF1DQ9H5J8 278 aaPredicted RBP18.49■□□□□ 0.55
LITAF-208ENST00000571627 POLLQ9UGP5 575 aa18.49■□□□□ 0.55
LITAF-208ENST00000571627 RTL9Q8NET4 1388 aa18.48■□□□□ 0.55
LITAF-208ENST00000571627 CDC5LQ99459 802 aaKnown RBP18.48■□□□□ 0.55
LITAF-208ENST00000571627 PLA2G12BQ9BX93 195 aa18.48■□□□□ 0.55
LITAF-208ENST00000571627 HACL1Q9UJ83 578 aa18.48■□□□□ 0.55
LITAF-208ENST00000571627 ZNRF3Q9ULT6 936 aa18.48■□□□□ 0.55
LITAF-208ENST00000571627 RIMBP2O15034 1052 aa18.47■□□□□ 0.55
LITAF-208ENST00000571627 CXCL9Q07325 125 aa18.47■□□□□ 0.55
LITAF-208ENST00000571627 FAM161AQ3B820 660 aa18.47■□□□□ 0.55
LITAF-208ENST00000571627 TBC1D16Q8TBP0 767 aa18.47■□□□□ 0.55
LITAF-208ENST00000571627 ANKIB1Q9P2G1 1089 aa18.47■□□□□ 0.55
LITAF-208ENST00000571627 ADAMTSL1Q8N6G6 1762 aa18.47■□□□□ 0.55
LITAF-208ENST00000571627 YDJCA8MPS7 323 aa18.46■□□□□ 0.55
LITAF-208ENST00000571627 RAD17O75943 681 aa18.46■□□□□ 0.55
LITAF-208ENST00000571627 UFL1O94874 794 aa18.46■□□□□ 0.55
LITAF-208ENST00000571627 WASHC4Q2M389 1173 aa18.46■□□□□ 0.55
LITAF-208ENST00000571627 EAPPQ56P03 285 aaPredicted RBP18.46■□□□□ 0.55
LITAF-208ENST00000571627 SCN9AQ15858 1988 aa18.46■□□□□ 0.55
LITAF-208ENST00000571627 GRM8O00222 908 aa18.45■□□□□ 0.54
LITAF-208ENST00000571627 ITGA6P23229 1130 aa18.45■□□□□ 0.54
LITAF-208ENST00000571627 EPHX2P34913 555 aa18.45■□□□□ 0.54
LITAF-208ENST00000571627 SCNN1DP51172 638 aa18.45■□□□□ 0.54
LITAF-208ENST00000571627 APLP1P51693 650 aa18.45■□□□□ 0.54
LITAF-208ENST00000571627 HTRA3P83110 453 aa18.45■□□□□ 0.54
LITAF-208ENST00000571627 SRCIN1Q9C0H9 1055 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms