RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 PPIP5K2O43314 1243 aa12.56□□□□□ -0.4
CIITA-207ENST00000571545 EPHX2P34913 555 aa12.56□□□□□ -0.4
CIITA-207ENST00000571545 DPP8Q6V1X1 898 aaPredicted RBP12.56□□□□□ -0.4
CIITA-207ENST00000571545 SP8Q8IXZ3 490 aa12.56□□□□□ -0.4
CIITA-207ENST00000571545 JMYQ8N9B5 988 aa12.56□□□□□ -0.4
CIITA-207ENST00000571545 STK31Q9BXU1 1019 aa12.56□□□□□ -0.4
CIITA-207ENST00000571545 RTFDC1Q9BY42 306 aaPredicted RBP12.56□□□□□ -0.4
CIITA-207ENST00000571545 CREBZFQ9NS37 354 aa12.56□□□□□ -0.4
CIITA-207ENST00000571545 IL16Q14005 1332 aa12.56□□□□□ -0.4
CIITA-207ENST00000571545 CDHR2Q9BYE9 1310 aa12.56□□□□□ -0.4
CIITA-207ENST00000571545 CACNA1FO60840 1977 aa12.56□□□□□ -0.4
CIITA-207ENST00000571545 ADAMTSL1Q8N6G6 1762 aa12.56□□□□□ -0.4
CIITA-207ENST00000571545 ZNF316A6NFI3 1004 aaPredicted RBP12.55□□□□□ -0.4
CIITA-207ENST00000571545 HCLS1P14317 486 aaPredicted RBP12.55□□□□□ -0.4
CIITA-207ENST00000571545 C3orf67Q6ZVT6 689 aa12.55□□□□□ -0.4
CIITA-207ENST00000571545 MPNDQ8N594 471 aa12.55□□□□□ -0.4
CIITA-207ENST00000571545 MRS2Q9HD23 443 aa12.55□□□□□ -0.4
CIITA-207ENST00000571545 DSG3P32926 999 aa12.54□□□□□ -0.4
CIITA-207ENST00000571545 SF3B3Q15393 1217 aaKnown RBP12.54□□□□□ -0.4
CIITA-207ENST00000571545 EAPPQ56P03 285 aaPredicted RBP12.54□□□□□ -0.4
CIITA-207ENST00000571545 ZBTB38Q8NAP3 1195 aaPredicted RBP12.54□□□□□ -0.4
CIITA-207ENST00000571545 CCDC191Q8NCU4 936 aa12.54□□□□□ -0.4
CIITA-207ENST00000571545 TCERG1O14776 1098 aaKnown RBP12.53□□□□□ -0.4
CIITA-207ENST00000571545 KIAA2012Q0VF49 1180 aa12.53□□□□□ -0.4
CIITA-207ENST00000571545 NEXNQ0ZGT2 675 aa12.53□□□□□ -0.4
CIITA-207ENST00000571545 FAM89AQ96GI7 184 aa12.53□□□□□ -0.4
CIITA-207ENST00000571545 ZNRF3Q9ULT6 936 aa12.53□□□□□ -0.4
CIITA-207ENST00000571545 CLEC11AQ9Y240 323 aa12.53□□□□□ -0.4
CIITA-207ENST00000571545 GJA3Q9Y6H8 435 aa12.53□□□□□ -0.4
CIITA-207ENST00000571545 COL4A5P29400 1685 aa12.52□□□□□ -0.4
CIITA-207ENST00000571545 ATP5J2-PTCD1G3V325 749 aa12.52□□□□□ -0.41
CIITA-207ENST00000571545 ELL2O00472 640 aaPredicted RBP12.52□□□□□ -0.41
CIITA-207ENST00000571545 IRS4O14654 1257 aaPredicted RBP12.52□□□□□ -0.41
CIITA-207ENST00000571545 TNIP1Q15025 636 aa12.52□□□□□ -0.41
CIITA-207ENST00000571545 AOC3Q16853 763 aa12.52□□□□□ -0.41
CIITA-207ENST00000571545 WWC1Q8IX03 1113 aa12.52□□□□□ -0.41
CIITA-207ENST00000571545 CWC25Q9NXE8 425 aaPredicted RBP12.52□□□□□ -0.41
CIITA-207ENST00000571545 MYH3P11055 1940 aa12.51□□□□□ -0.41
CIITA-207ENST00000571545 PCCAP05165 728 aaPredicted RBP12.51□□□□□ -0.41
CIITA-207ENST00000571545 HTRA3P83110 453 aa12.51□□□□□ -0.41
CIITA-207ENST00000571545 CCDC152Q4G0S7 254 aa12.51□□□□□ -0.41
CIITA-207ENST00000571545 USP50Q70EL3 339 aaPredicted RBP12.51□□□□□ -0.41
CIITA-207ENST00000571545 C8orf58Q8NAV2 365 aa12.51□□□□□ -0.41
CIITA-207ENST00000571545 EYA3Q99504 573 aa12.51□□□□□ -0.41
CIITA-207ENST00000571545 MYD88Q99836 296 aa12.51□□□□□ -0.41
CIITA-207ENST00000571545 METTL22Q9BUU2 404 aaPredicted RBP12.51□□□□□ -0.41
CIITA-207ENST00000571545 PASKQ96RG2 1323 aa12.51□□□□□ -0.41
CIITA-207ENST00000571545 TMEM88BA6NKF7 163 aa12.5□□□□□ -0.41
CIITA-207ENST00000571545 POTEIP0CG38 1075 aa12.5□□□□□ -0.41
CIITA-207ENST00000571545 POTEJP0CG39 1038 aa12.5□□□□□ -0.41
CIITA-207ENST00000571545 TWISTNBQ3B726 338 aaPredicted RBP12.5□□□□□ -0.41
CIITA-207ENST00000571545 PHAXQ9H814 394 aaKnown RBP12.5□□□□□ -0.41
CIITA-207ENST00000571545 ADARB2Q9NS39 739 aaKnown RBP12.5□□□□□ -0.41
CIITA-207ENST00000571545 TAF1P21675 1872 aa12.5□□□□□ -0.41
CIITA-207ENST00000571545 DUOX1Q9NRD9 1551 aa12.49□□□□□ -0.41
CIITA-207ENST00000571545 ZBTB22O15209 634 aa12.49□□□□□ -0.41
CIITA-207ENST00000571545 PDE8AO60658 829 aa12.49□□□□□ -0.41
CIITA-207ENST00000571545 SCNN1DP51172 638 aa12.49□□□□□ -0.41
CIITA-207ENST00000571545 RPS8P62241 208 aaKnown RBP12.49□□□□□ -0.41
CIITA-207ENST00000571545 WASHC4Q2M389 1173 aa12.49□□□□□ -0.41
CIITA-207ENST00000571545 IFFO2Q5TF58 517 aa12.49□□□□□ -0.41
CIITA-207ENST00000571545 CIAPIN1Q6FI81 312 aa12.49□□□□□ -0.41
CIITA-207ENST00000571545 KSR2Q6VAB6 950 aa12.49□□□□□ -0.41
CIITA-207ENST00000571545 WDR63Q8IWG1 891 aa12.49□□□□□ -0.41
CIITA-207ENST00000571545 TSR2Q969E8 191 aaKnown RBP12.49□□□□□ -0.41
CIITA-207ENST00000571545 LTBP1Q14766 1721 aa12.48□□□□□ -0.41
CIITA-207ENST00000571545 CNTNAP1P78357 1384 aa12.48□□□□□ -0.41
CIITA-207ENST00000571545 ITGBL1O95965 494 aaPredicted RBP12.48□□□□□ -0.41
CIITA-207ENST00000571545 RTL5Q5HYW3 569 aaPredicted RBP12.48□□□□□ -0.41
CIITA-207ENST00000571545 CNTROBQ8N137 903 aa12.48□□□□□ -0.41
CIITA-207ENST00000571545 GPRC5DQ9NZD1 345 aa12.48□□□□□ -0.41
CIITA-207ENST00000571545 NSFL1CQ9UNZ2 370 aaKnown RBP12.48□□□□□ -0.41
CIITA-207ENST00000571545 MAP3K2Q9Y2U5 619 aa12.48□□□□□ -0.41
CIITA-207ENST00000571545 TRPM7Q96QT4 1865 aa12.48□□□□□ -0.41
CIITA-207ENST00000571545 PI4KAP2A4QPH2 592 aa12.47□□□□□ -0.41
CIITA-207ENST00000571545 CXCL9Q07325 125 aa12.47□□□□□ -0.41
CIITA-207ENST00000571545 CCDC184Q52MB2 194 aa12.47□□□□□ -0.41
CIITA-207ENST00000571545 TSPYL6Q8N831 410 aa12.47□□□□□ -0.41
CIITA-207ENST00000571545 PI4KAP1Q8N8J0 262 aa12.47□□□□□ -0.41
CIITA-207ENST00000571545 CELF1Q92879 486 aaKnown RBP12.47□□□□□ -0.41
CIITA-207ENST00000571545 CDC5LQ99459 802 aaKnown RBP12.47□□□□□ -0.41
CIITA-207ENST00000571545 BCL2L13Q9BXK5 485 aa12.47□□□□□ -0.41
CIITA-207ENST00000571545 MYH16Q9H6N6 1097 aa12.47□□□□□ -0.41
CIITA-207ENST00000571545 PODXL2Q9NZ53 605 aa12.47□□□□□ -0.41
CIITA-207ENST00000571545 FANCIQ9NVI1 1328 aa12.46□□□□□ -0.41
CIITA-207ENST00000571545 C6orf229H3BNL8 230 aa12.46□□□□□ -0.41
CIITA-207ENST00000571545 RPS12P25398 132 aaKnown RBP12.46□□□□□ -0.41
CIITA-207ENST00000571545 EPS15P42566 896 aa12.46□□□□□ -0.41
CIITA-207ENST00000571545 MAP1SQ66K74 1059 aaPredicted RBP12.46□□□□□ -0.41
CIITA-207ENST00000571545 ANKRD18AQ8IVF6 992 aa12.46□□□□□ -0.41
CIITA-207ENST00000571545 ZC3H15Q8WU90 426 aaKnown RBP12.46□□□□□ -0.41
CIITA-207ENST00000571545 ANKIB1Q9P2G1 1089 aa12.46□□□□□ -0.41
CIITA-207ENST00000571545 RTL9Q8NET4 1388 aa12.45□□□□□ -0.42
CIITA-207ENST00000571545 G3V3G9 751 aa12.45□□□□□ -0.42
CIITA-207ENST00000571545 CTSWP56202 376 aa12.45□□□□□ -0.42
CIITA-207ENST00000571545 FLIIQ13045 1269 aa12.45□□□□□ -0.42
CIITA-207ENST00000571545 DCAF8Q5TAQ9 597 aa12.45□□□□□ -0.42
CIITA-207ENST00000571545 ZC3H12CQ9C0D7 883 aaKnown RBP12.45□□□□□ -0.42
CIITA-207ENST00000571545 GGA1Q9UJY5 639 aa12.45□□□□□ -0.42
CIITA-207ENST00000571545 XDHP47989 1333 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms