RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 PDZRN3Q9UPQ7 1066 aa8.89□□□□□ -0.99
SMG6-209ENST00000571442 LRRC37AA6NMS7 1700 aa8.88□□□□□ -0.99
SMG6-209ENST00000571442 PDE8AO60658 829 aa8.88□□□□□ -0.99
SMG6-209ENST00000571442 NBPF7P0C2Y1 421 aaPredicted RBP8.88□□□□□ -0.99
SMG6-209ENST00000571442 TRIM27P14373 513 aa8.88□□□□□ -0.99
SMG6-209ENST00000571442 FOXO4P98177 505 aa8.88□□□□□ -0.99
SMG6-209ENST00000571442 RPGRQ92834 1020 aaKnown RBP8.88□□□□□ -0.99
SMG6-209ENST00000571442 CNKSR1Q969H4 720 aa8.88□□□□□ -0.99
SMG6-209ENST00000571442 SUCLG2Q96I99 432 aa8.88□□□□□ -0.99
SMG6-209ENST00000571442 CRAMP1Q96RY5 1269 aa8.88□□□□□ -0.99
SMG6-209ENST00000571442 COL4A5P29400 1685 aa8.88□□□□□ -0.99
SMG6-209ENST00000571442 DUOX1Q9NRD9 1551 aa8.87□□□□□ -0.99
SMG6-209ENST00000571442 ALDH1L1O75891 902 aa8.87□□□□□ -0.99
SMG6-209ENST00000571442 CTSWP56202 376 aa8.87□□□□□ -0.99
SMG6-209ENST00000571442 TTLL11Q8NHH1 800 aa8.87□□□□□ -0.99
SMG6-209ENST00000571442 RBM17Q96I25 401 aaKnown RBP8.87□□□□□ -0.99
SMG6-209ENST00000571442 PLA2G12BQ9BX93 195 aa8.87□□□□□ -0.99
SMG6-209ENST00000571442 SRCIN1Q9C0H9 1055 aa8.87□□□□□ -0.99
SMG6-209ENST00000571442 GREM2Q9H772 168 aa8.87□□□□□ -0.99
SMG6-209ENST00000571442 LTBP1Q14766 1721 aa8.87□□□□□ -0.99
SMG6-209ENST00000571442 UTYO14607 1347 aa8.86□□□□□ -0.99
SMG6-209ENST00000571442 DICER1Q9UPY3 1922 aaKnown RBP8.86□□□□□ -0.99
SMG6-209ENST00000571442 GRM8O00222 908 aa8.86□□□□□ -0.99
SMG6-209ENST00000571442 PPEF1O14829 653 aaPredicted RBP8.86□□□□□ -0.99
SMG6-209ENST00000571442 RLBP1P12271 317 aa8.86□□□□□ -0.99
SMG6-209ENST00000571442 ALDH1B1P30837 517 aa8.86□□□□□ -0.99
SMG6-209ENST00000571442 GRAPQ13588 217 aa8.86□□□□□ -0.99
SMG6-209ENST00000571442 FAM161AQ3B820 660 aa8.86□□□□□ -0.99
SMG6-209ENST00000571442 GRAPLQ8TC17 118 aaPredicted RBP8.86□□□□□ -0.99
SMG6-209ENST00000571442 ZNF526Q8TF50 670 aaPredicted RBP8.86□□□□□ -0.99
SMG6-209ENST00000571442 FRAT1Q92837 279 aaPredicted RBP8.86□□□□□ -0.99
SMG6-209ENST00000571442 CLUAP1Q96AJ1 413 aa8.86□□□□□ -0.99
SMG6-209ENST00000571442 USP44Q9H0E7 712 aa8.86□□□□□ -0.99
SMG6-209ENST00000571442 GPBP1L1Q9HC44 474 aaPredicted RBP8.86□□□□□ -0.99
SMG6-209ENST00000571442 A0A1B0GUL6 1792 aa8.86□□□□□ -0.99
SMG6-209ENST00000571442 TIAM2Q8IVF5 1701 aa8.85□□□□□ -0.99
SMG6-209ENST00000571442 CEP350Q5VT06 3117 aa8.85□□□□□ -0.99
SMG6-209ENST00000571442 KIF16BQ96L93 1317 aa8.85□□□□□ -0.99
SMG6-209ENST00000571442 WTIPA6NIX2 430 aaPredicted RBP8.85□□□□□ -0.99
SMG6-209ENST00000571442 CSF1RP07333 972 aa8.85□□□□□ -0.99
SMG6-209ENST00000571442 C9orf131Q5VYM1 1079 aa8.85□□□□□ -0.99
SMG6-209ENST00000571442 ATF7IPQ6VMQ6 1270 aa8.85□□□□□ -0.99
SMG6-209ENST00000571442 DDX46Q7L014 1031 aaKnown RBP8.85□□□□□ -0.99
SMG6-209ENST00000571442 ANKRD44Q8N8A2 993 aa8.85□□□□□ -0.99
SMG6-209ENST00000571442 ARHGAP45Q92619 1136 aa8.85□□□□□ -0.99
SMG6-209ENST00000571442 MEIS3Q99687 375 aa8.85□□□□□ -0.99
SMG6-209ENST00000571442 ATP6V0A2Q9Y487 856 aa8.85□□□□□ -0.99
SMG6-209ENST00000571442 PLIN1O60240 522 aa8.84□□□□□ -0.99
SMG6-209ENST00000571442 CCDC93Q567U6 631 aa8.84□□□□□ -0.99
SMG6-209ENST00000571442 INTS3Q68E01 1043 aaKnown RBP8.84□□□□□ -0.99
SMG6-209ENST00000571442 TMEM57Q8N5G2 664 aa8.84□□□□□ -0.99
SMG6-209ENST00000571442 GPR101Q96P66 508 aaPredicted RBP8.84□□□□□ -0.99
SMG6-209ENST00000571442 API5Q9BZZ5 524 aaKnown RBP8.84□□□□□ -0.99
SMG6-209ENST00000571442 BICC1Q9H694 974 aaKnown RBP8.84□□□□□ -0.99
SMG6-209ENST00000571442 ZNF277Q9NRM2 450 aaPredicted RBP8.84□□□□□ -0.99
SMG6-209ENST00000571442 C9orf78Q9NZ63 289 aaPredicted RBP8.84□□□□□ -0.99
SMG6-209ENST00000571442 RTL9Q8NET4 1388 aa8.84□□□□□ -0.99
SMG6-209ENST00000571442 LTBP3Q9NS15 1303 aa8.83□□□□□ -1
SMG6-209ENST00000571442 BBOX1O75936 387 aa8.83□□□□□ -1
SMG6-209ENST00000571442 ITGA6P23229 1130 aa8.83□□□□□ -1
SMG6-209ENST00000571442 RPS8P62241 208 aaKnown RBP8.83□□□□□ -1
SMG6-209ENST00000571442 GPSM2P81274 684 aa8.83□□□□□ -1
SMG6-209ENST00000571442 FKBP4Q02790 459 aaKnown RBP eCLIP8.83□□□□□ -1
SMG6-209ENST00000571442 CCDC152Q4G0S7 254 aa8.83□□□□□ -1
SMG6-209ENST00000571442 ZKSCAN2Q63HK3 967 aa8.83□□□□□ -1
SMG6-209ENST00000571442 LMBR1LQ6UX01 489 aa8.83□□□□□ -1
SMG6-209ENST00000571442 SP8Q8IXZ3 490 aa8.83□□□□□ -1
SMG6-209ENST00000571442 PANK1Q8TE04 598 aa8.83□□□□□ -1
SMG6-209ENST00000571442 ZNF594Q96JF6 807 aaPredicted RBP8.83□□□□□ -1
SMG6-209ENST00000571442 TAOK3Q9H2K8 898 aa8.83□□□□□ -1
SMG6-209ENST00000571442 RNF181Q9P0P0 153 aa8.83□□□□□ -1
SMG6-209ENST00000571442 RCAN3Q9UKA8 241 aa8.83□□□□□ -1
SMG6-209ENST00000571442 CCT4P50991 539 aaKnown RBP8.82□□□□□ -1
SMG6-209ENST00000571442 RABL6Q3YEC7 729 aaPredicted RBP8.82□□□□□ -1
SMG6-209ENST00000571442 C20orf194Q5TEA3 1177 aa8.82□□□□□ -1
SMG6-209ENST00000571442 POLLQ9UGP5 575 aa8.82□□□□□ -1
SMG6-209ENST00000571442 SNAP23O00161 211 aa8.81□□□□□ -1
SMG6-209ENST00000571442 LMNB1P20700 586 aa8.81□□□□□ -1
SMG6-209ENST00000571442 RFX5P48382 616 aaPredicted RBP8.81□□□□□ -1
SMG6-209ENST00000571442 ANKRD18AQ8IVF6 992 aa8.81□□□□□ -1
SMG6-209ENST00000571442 RTKN2Q8IZC4 609 aa8.81□□□□□ -1
SMG6-209ENST00000571442 KLHDC4Q8TBB5 520 aa8.81□□□□□ -1
SMG6-209ENST00000571442 PSMD1Q99460 953 aa8.81□□□□□ -1
SMG6-209ENST00000571442 RTFDC1Q9BY42 306 aaPredicted RBP8.81□□□□□ -1
SMG6-209ENST00000571442 PUS3Q9BZE2 481 aaKnown RBP8.81□□□□□ -1
SMG6-209ENST00000571442 LRRFIP2Q9Y608 721 aaKnown RBP8.81□□□□□ -1
SMG6-209ENST00000571442 IPO8O15397 1037 aaKnown RBP8.8□□□□□ -1
SMG6-209ENST00000571442 KLRK1P26718 216 aa8.8□□□□□ -1
SMG6-209ENST00000571442 IARSP41252 1262 aaKnown RBP8.8□□□□□ -1
SMG6-209ENST00000571442 AOC3Q16853 763 aa8.8□□□□□ -1
SMG6-209ENST00000571442 SOGA3Q5TF21 947 aa8.8□□□□□ -1
SMG6-209ENST00000571442 CC2D2BQ6DHV5 1058 aa8.8□□□□□ -1
SMG6-209ENST00000571442 DZIP1LQ8IYY4 767 aaKnown RBP8.8□□□□□ -1
SMG6-209ENST00000571442 MPNDQ8N594 471 aa8.8□□□□□ -1
SMG6-209ENST00000571442 C1orf115Q9H7X2 142 aa8.8□□□□□ -1
SMG6-209ENST00000571442 MINPP1Q9UNW1 487 aa8.8□□□□□ -1
SMG6-209ENST00000571442 NSFL1CQ9UNZ2 370 aaKnown RBP8.8□□□□□ -1
SMG6-209ENST00000571442 CHMP3Q9Y3E7 222 aa8.8□□□□□ -1
SMG6-209ENST00000571442 SCN9AQ15858 1988 aa8.8□□□□□ -1
SMG6-209ENST00000571442 ZNF541Q9H0D2 1346 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms