RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 TAF1DQ9H5J8 278 aaPredicted RBP17.57■□□□□ 0.4
PRPF8-202ENST00000571346 HACL1Q9UJ83 578 aa17.57■□□□□ 0.4
PRPF8-202ENST00000571346 IL16Q14005 1332 aa17.56■□□□□ 0.4
PRPF8-202ENST00000571346 FANCIQ9NVI1 1328 aa17.56■□□□□ 0.4
PRPF8-202ENST00000571346 COL4A1P02462 1669 aa17.56■□□□□ 0.4
PRPF8-202ENST00000571346 BBOX1O75936 387 aa17.56■□□□□ 0.4
PRPF8-202ENST00000571346 DUOX1Q9NRD9 1551 aa17.56■□□□□ 0.4
PRPF8-202ENST00000571346 EPHX2P34913 555 aa17.55■□□□□ 0.4
PRPF8-202ENST00000571346 LDHDQ86WU2 507 aa17.55■□□□□ 0.4
PRPF8-202ENST00000571346 FAM9BQ8IZU0 186 aa17.55■□□□□ 0.4
PRPF8-202ENST00000571346 SUPT20HQ8NEM7 779 aa17.55■□□□□ 0.4
PRPF8-202ENST00000571346 MAP3K2Q9Y2U5 619 aa17.55■□□□□ 0.4
PRPF8-202ENST00000571346 LMOD1P29536 600 aaPredicted RBP17.54■□□□□ 0.4
PRPF8-202ENST00000571346 TRIM28Q13263 835 aaKnown RBP17.54■□□□□ 0.4
PRPF8-202ENST00000571346 SP8Q8IXZ3 490 aa17.54■□□□□ 0.4
PRPF8-202ENST00000571346 MPNDQ8N594 471 aa17.54■□□□□ 0.4
PRPF8-202ENST00000571346 DNAJC5GQ8N7S2 189 aa17.54■□□□□ 0.4
PRPF8-202ENST00000571346 ZBTB38Q8NAP3 1195 aaPredicted RBP17.54■□□□□ 0.4
PRPF8-202ENST00000571346 KLRG1Q96E93 195 aa17.54■□□□□ 0.4
PRPF8-202ENST00000571346 CWC25Q9NXE8 425 aaPredicted RBP17.54■□□□□ 0.4
PRPF8-202ENST00000571346 CLEC11AQ9Y240 323 aa17.54■□□□□ 0.4
PRPF8-202ENST00000571346 LTBP1Q14766 1721 aa17.54■□□□□ 0.4
PRPF8-202ENST00000571346 ADAMTSL1Q8N6G6 1762 aa17.53■□□□□ 0.4
PRPF8-202ENST00000571346 TMC4Q7Z404 712 aa17.53■□□□□ 0.4
PRPF8-202ENST00000571346 CCDC191Q8NCU4 936 aa17.53■□□□□ 0.4
PRPF8-202ENST00000571346 CELF1Q92879 486 aaKnown RBP17.53■□□□□ 0.4
PRPF8-202ENST00000571346 METTL22Q9BUU2 404 aaPredicted RBP17.53■□□□□ 0.4
PRPF8-202ENST00000571346 SF3B3Q15393 1217 aaKnown RBP17.52■□□□□ 0.4
PRPF8-202ENST00000571346 JARID2Q92833 1246 aaPredicted RBP17.52■□□□□ 0.4
PRPF8-202ENST00000571346 RTFDC1Q9BY42 306 aaPredicted RBP17.52■□□□□ 0.4
PRPF8-202ENST00000571346 PI4KAP2A4QPH2 592 aa17.51■□□□□ 0.39
PRPF8-202ENST00000571346 HSP90B1P14625 803 aaKnown RBP17.51■□□□□ 0.39
PRPF8-202ENST00000571346 NEXNQ0ZGT2 675 aa17.51■□□□□ 0.39
PRPF8-202ENST00000571346 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
PRPF8-202ENST00000571346 PI4KAP1Q8N8J0 262 aa17.51■□□□□ 0.39
PRPF8-202ENST00000571346 CCDC85AQ96PX6 553 aaPredicted RBP17.51■□□□□ 0.39
PRPF8-202ENST00000571346 PCCAP05165 728 aaPredicted RBP17.5■□□□□ 0.39
PRPF8-202ENST00000571346 SCNN1DP51172 638 aa17.5■□□□□ 0.39
PRPF8-202ENST00000571346 KIAA2012Q0VF49 1180 aa17.5■□□□□ 0.39
PRPF8-202ENST00000571346 KSR2Q6VAB6 950 aa17.5■□□□□ 0.39
PRPF8-202ENST00000571346 PNMA8AQ86V59 439 aaPredicted RBP17.5■□□□□ 0.39
PRPF8-202ENST00000571346 ZNRF3Q9ULT6 936 aa17.5■□□□□ 0.39
PRPF8-202ENST00000571346 SPEF2Q9C093 1822 aa17.49■□□□□ 0.39
PRPF8-202ENST00000571346 MYH3P11055 1940 aa17.49■□□□□ 0.39
PRPF8-202ENST00000571346 SLC4A2P04920 1241 aa17.49■□□□□ 0.39
PRPF8-202ENST00000571346 CCDC152Q4G0S7 254 aa17.49■□□□□ 0.39
PRPF8-202ENST00000571346 G2E3Q7L622 706 aa17.49■□□□□ 0.39
PRPF8-202ENST00000571346 WDR63Q8IWG1 891 aa17.49■□□□□ 0.39
PRPF8-202ENST00000571346 VPS33BQ9H267 617 aa17.49■□□□□ 0.39
PRPF8-202ENST00000571346 NSFL1CQ9UNZ2 370 aaKnown RBP17.49■□□□□ 0.39
PRPF8-202ENST00000571346 C6orf229H3BNL8 230 aa17.48■□□□□ 0.39
PRPF8-202ENST00000571346 IGKV5-2P06315 115 aa17.48■□□□□ 0.39
PRPF8-202ENST00000571346 EXOSC9Q06265 439 aaKnown RBP17.48■□□□□ 0.39
PRPF8-202ENST00000571346 FLIIQ13045 1269 aa17.48■□□□□ 0.39
PRPF8-202ENST00000571346 FKBP5Q13451 457 aaPredicted RBP17.48■□□□□ 0.39
PRPF8-202ENST00000571346 CWF19L2Q2TBE0 894 aaKnown RBP17.48■□□□□ 0.39
PRPF8-202ENST00000571346 MAP1SQ66K74 1059 aaPredicted RBP17.48■□□□□ 0.39
PRPF8-202ENST00000571346 SEC31BQ9NQW1 1179 aa17.48■□□□□ 0.39
PRPF8-202ENST00000571346 PDE8AO60658 829 aa17.47■□□□□ 0.39
PRPF8-202ENST00000571346 RAD17O75943 681 aa17.47■□□□□ 0.39
PRPF8-202ENST00000571346 EPS15P42566 896 aa17.47■□□□□ 0.39
PRPF8-202ENST00000571346 GPSM2P81274 684 aa17.47■□□□□ 0.39
PRPF8-202ENST00000571346 CXCL9Q07325 125 aa17.47■□□□□ 0.39
PRPF8-202ENST00000571346 CREBZFQ9NS37 354 aa17.47■□□□□ 0.39
PRPF8-202ENST00000571346 RPS8P62241 208 aaKnown RBP17.46■□□□□ 0.39
PRPF8-202ENST00000571346 CIAPIN1Q6FI81 312 aa17.46■□□□□ 0.39
PRPF8-202ENST00000571346 GPR101Q96P66 508 aaPredicted RBP17.46■□□□□ 0.39
PRPF8-202ENST00000571346 MYH16Q9H6N6 1097 aa17.46■□□□□ 0.39
PRPF8-202ENST00000571346 PASKQ96RG2 1323 aa17.46■□□□□ 0.38
PRPF8-202ENST00000571346 CDHR2Q9BYE9 1310 aa17.46■□□□□ 0.38
PRPF8-202ENST00000571346 NEURL1BA8MQ27 555 aa17.45■□□□□ 0.38
PRPF8-202ENST00000571346 RIMBP2O15034 1052 aa17.45■□□□□ 0.38
PRPF8-202ENST00000571346 GMPSP49915 693 aaPredicted RBP17.45■□□□□ 0.38
PRPF8-202ENST00000571346 CTSWP56202 376 aa17.45■□□□□ 0.38
PRPF8-202ENST00000571346 WASHC4Q2M389 1173 aa17.45■□□□□ 0.38
PRPF8-202ENST00000571346 UBE3BQ7Z3V4 1068 aa17.45■□□□□ 0.38
PRPF8-202ENST00000571346 BCL2L13Q9BXK5 485 aa17.45■□□□□ 0.38
PRPF8-202ENST00000571346 DBNDD1Q9H9R9 158 aa17.45■□□□□ 0.38
PRPF8-202ENST00000571346 SPINK5Q9NQ38 1064 aaPredicted RBP17.45■□□□□ 0.38
PRPF8-202ENST00000571346 ANKIB1Q9P2G1 1089 aa17.45■□□□□ 0.38
PRPF8-202ENST00000571346 MKRN1Q9UHC7 482 aaKnown RBP17.45■□□□□ 0.38
PRPF8-202ENST00000571346 CACNA1FO60840 1977 aa17.45■□□□□ 0.38
PRPF8-202ENST00000571346 UFL1O94874 794 aa17.44■□□□□ 0.38
PRPF8-202ENST00000571346 JMYQ8N9B5 988 aa17.44■□□□□ 0.38
PRPF8-202ENST00000571346 EYA3Q99504 573 aa17.44■□□□□ 0.38
PRPF8-202ENST00000571346 GPRC5DQ9NZD1 345 aa17.44■□□□□ 0.38
PRPF8-202ENST00000571346 POLLQ9UGP5 575 aa17.44■□□□□ 0.38
PRPF8-202ENST00000571346 YDJCA8MPS7 323 aa17.43■□□□□ 0.38
PRPF8-202ENST00000571346 TNIP1Q15025 636 aa17.43■□□□□ 0.38
PRPF8-202ENST00000571346 USP50Q70EL3 339 aaPredicted RBP17.43■□□□□ 0.38
PRPF8-202ENST00000571346 ANKRD18AQ8IVF6 992 aa17.43■□□□□ 0.38
PRPF8-202ENST00000571346 CNTROBQ8N137 903 aa17.43■□□□□ 0.38
PRPF8-202ENST00000571346 TBC1D16Q8TBP0 767 aa17.43■□□□□ 0.38
PRPF8-202ENST00000571346 ADARB2Q9NS39 739 aaKnown RBP17.43■□□□□ 0.38
PRPF8-202ENST00000571346 TMEM88BA6NKF7 163 aa17.42■□□□□ 0.38
PRPF8-202ENST00000571346 ECE2O60344 883 aa17.42■□□□□ 0.38
PRPF8-202ENST00000571346 VAMP4O75379 141 aa17.42■□□□□ 0.38
PRPF8-202ENST00000571346 ITGBL1O95965 494 aaPredicted RBP17.42■□□□□ 0.38
PRPF8-202ENST00000571346 DNAAF4Q8WXU2 420 aa17.42■□□□□ 0.38
PRPF8-202ENST00000571346 CDC5LQ99459 802 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 347.3 ms