RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 GJA3Q9Y6H8 435 aa14.71□□□□□ -0.05
LITAF-206ENST00000571277 EPS15P42566 896 aa14.7□□□□□ -0.06
LITAF-206ENST00000571277 KIAA2012Q0VF49 1180 aa14.7□□□□□ -0.06
LITAF-206ENST00000571277 CCDC27Q2M243 656 aa14.7□□□□□ -0.06
LITAF-206ENST00000571277 NIM1KQ8IY84 436 aa14.7□□□□□ -0.06
LITAF-206ENST00000571277 MPNDQ8N594 471 aa14.7□□□□□ -0.06
LITAF-206ENST00000571277 TSPYL6Q8N831 410 aa14.7□□□□□ -0.06
LITAF-206ENST00000571277 CXCL9Q07325 125 aa14.69□□□□□ -0.06
LITAF-206ENST00000571277 RTL5Q5HYW3 569 aaPredicted RBP14.69□□□□□ -0.06
LITAF-206ENST00000571277 MAP1SQ66K74 1059 aaPredicted RBP14.69□□□□□ -0.06
LITAF-206ENST00000571277 DPP8Q6V1X1 898 aaPredicted RBP14.69□□□□□ -0.06
LITAF-206ENST00000571277 TMC4Q7Z404 712 aa14.69□□□□□ -0.06
LITAF-206ENST00000571277 RIC3Q7Z5B4 369 aa14.69□□□□□ -0.06
LITAF-206ENST00000571277 SUPT20HQ8NEM7 779 aa14.69□□□□□ -0.06
LITAF-206ENST00000571277 CELF1Q92879 486 aaKnown RBP14.69□□□□□ -0.06
LITAF-206ENST00000571277 TMX4Q9H1E5 349 aaPredicted RBP14.69□□□□□ -0.06
LITAF-206ENST00000571277 ZNRF3Q9ULT6 936 aa14.69□□□□□ -0.06
LITAF-206ENST00000571277 GOLGA2Q08379 1002 aa14.68□□□□□ -0.06
LITAF-206ENST00000571277 WWC1Q8IX03 1113 aa14.68□□□□□ -0.06
LITAF-206ENST00000571277 CNTROBQ8N137 903 aa14.68□□□□□ -0.06
LITAF-206ENST00000571277 ZBTB38Q8NAP3 1195 aaPredicted RBP14.68□□□□□ -0.06
LITAF-206ENST00000571277 TSR2Q969E8 191 aaKnown RBP14.68□□□□□ -0.06
LITAF-206ENST00000571277 CLEC11AQ9Y240 323 aa14.68□□□□□ -0.06
LITAF-206ENST00000571277 IRS4O14654 1257 aaPredicted RBP14.67□□□□□ -0.06
LITAF-206ENST00000571277 ZEB1P37275 1124 aaPredicted RBP14.67□□□□□ -0.06
LITAF-206ENST00000571277 CCDC30Q5VVM6 783 aa14.67□□□□□ -0.06
LITAF-206ENST00000571277 MKRN1Q9UHC7 482 aaKnown RBP14.67□□□□□ -0.06
LITAF-206ENST00000571277 CNTNAP1P78357 1384 aa14.67□□□□□ -0.06
LITAF-206ENST00000571277 TMEM88BA6NKF7 163 aa14.66□□□□□ -0.06
LITAF-206ENST00000571277 YDJCA8MPS7 323 aa14.66□□□□□ -0.06
LITAF-206ENST00000571277 LMOD1P29536 600 aaPredicted RBP14.66□□□□□ -0.06
LITAF-206ENST00000571277 NCBP3Q53F19 620 aaKnown RBP14.66□□□□□ -0.06
LITAF-206ENST00000571277 COL13A1Q5TAT6 717 aaPredicted RBP14.66□□□□□ -0.06
LITAF-206ENST00000571277 CCDC191Q8NCU4 936 aa14.66□□□□□ -0.06
LITAF-206ENST00000571277 MYD88Q99836 296 aa14.66□□□□□ -0.06
LITAF-206ENST00000571277 METTL22Q9BUU2 404 aaPredicted RBP14.66□□□□□ -0.06
LITAF-206ENST00000571277 GPRC5DQ9NZD1 345 aa14.66□□□□□ -0.06
LITAF-206ENST00000571277 PCCAP05165 728 aaPredicted RBP14.65□□□□□ -0.06
LITAF-206ENST00000571277 HSPA1AP0DMV8 641 aaKnown RBP14.65□□□□□ -0.06
LITAF-206ENST00000571277 HSPA1BP0DMV9 641 aaKnown RBP14.65□□□□□ -0.06
LITAF-206ENST00000571277 USP50Q70EL3 339 aaPredicted RBP14.65□□□□□ -0.06
LITAF-206ENST00000571277 IL16Q14005 1332 aa14.65□□□□□ -0.06
LITAF-206ENST00000571277 ZNF316A6NFI3 1004 aaPredicted RBP14.64□□□□□ -0.07
LITAF-206ENST00000571277 GMPSP49915 693 aaPredicted RBP14.64□□□□□ -0.07
LITAF-206ENST00000571277 RPS8P62241 208 aaKnown RBP14.64□□□□□ -0.07
LITAF-206ENST00000571277 GPSM2P81274 684 aa14.64□□□□□ -0.07
LITAF-206ENST00000571277 FMR1Q06787 632 aaKnown RBP eCLIP14.64□□□□□ -0.07
LITAF-206ENST00000571277 CIAPIN1Q6FI81 312 aa14.64□□□□□ -0.07
LITAF-206ENST00000571277 CHMP4AQ9BY43 222 aa14.64□□□□□ -0.07
LITAF-206ENST00000571277 MRS2Q9HD23 443 aa14.64□□□□□ -0.07
LITAF-206ENST00000571277 SEC31BQ9NQW1 1179 aa14.64□□□□□ -0.07
LITAF-206ENST00000571277 POLLQ9UGP5 575 aa14.64□□□□□ -0.07
LITAF-206ENST00000571277 NSFL1CQ9UNZ2 370 aaKnown RBP14.64□□□□□ -0.07
LITAF-206ENST00000571277 CDHR2Q9BYE9 1310 aa14.64□□□□□ -0.07
LITAF-206ENST00000571277 PI4KAP2A4QPH2 592 aa14.63□□□□□ -0.07
LITAF-206ENST00000571277 RAD17O75943 681 aa14.63□□□□□ -0.07
LITAF-206ENST00000571277 DDX58O95786 925 aaKnown RBP14.63□□□□□ -0.07
LITAF-206ENST00000571277 IGKV5-2P06315 115 aa14.63□□□□□ -0.07
LITAF-206ENST00000571277 KSR2Q6VAB6 950 aa14.63□□□□□ -0.07
LITAF-206ENST00000571277 PI4KAP1Q8N8J0 262 aa14.63□□□□□ -0.07
LITAF-206ENST00000571277 JARID2Q92833 1246 aaPredicted RBP14.63□□□□□ -0.07
LITAF-206ENST00000571277 ADARB2Q9NS39 739 aaKnown RBP14.63□□□□□ -0.07
LITAF-206ENST00000571277 CWC25Q9NXE8 425 aaPredicted RBP14.63□□□□□ -0.07
LITAF-206ENST00000571277 MAP3K2Q9Y2U5 619 aa14.63□□□□□ -0.07
LITAF-206ENST00000571277 RASSF10A6NK89 507 aa14.62□□□□□ -0.07
LITAF-206ENST00000571277 VEGFBP49765 207 aa14.62□□□□□ -0.07
LITAF-206ENST00000571277 WASHC4Q2M389 1173 aa14.62□□□□□ -0.07
LITAF-206ENST00000571277 TWISTNBQ3B726 338 aaPredicted RBP14.62□□□□□ -0.07
LITAF-206ENST00000571277 G2E3Q7L622 706 aa14.62□□□□□ -0.07
LITAF-206ENST00000571277 TRPM7Q96QT4 1865 aa14.62□□□□□ -0.07
LITAF-206ENST00000571277 SHTN1A0MZ66 631 aa14.61□□□□□ -0.07
LITAF-206ENST00000571277 TRAF5O00463 557 aa14.61□□□□□ -0.07
LITAF-206ENST00000571277 PDE8AO60658 829 aa14.61□□□□□ -0.07
LITAF-206ENST00000571277 HSP90B1P14625 803 aaKnown RBP14.61□□□□□ -0.07
LITAF-206ENST00000571277 HIRAP54198 1017 aaPredicted RBP14.61□□□□□ -0.07
LITAF-206ENST00000571277 TNIP1Q15025 636 aa14.61□□□□□ -0.07
LITAF-206ENST00000571277 TBC1D16Q8TBP0 767 aa14.61□□□□□ -0.07
LITAF-206ENST00000571277 PODXL2Q9NZ53 605 aa14.61□□□□□ -0.07
LITAF-206ENST00000571277 PGAP2Q9UHJ9 254 aa14.61□□□□□ -0.07
LITAF-206ENST00000571277 SCN9AQ15858 1988 aa14.61□□□□□ -0.07
LITAF-206ENST00000571277 FANCIQ9NVI1 1328 aa14.61□□□□□ -0.07
LITAF-206ENST00000571277 MYH3P11055 1940 aa14.6□□□□□ -0.07
LITAF-206ENST00000571277 ANP32CO43423 234 aa14.6□□□□□ -0.07
LITAF-206ENST00000571277 CCDC152Q4G0S7 254 aa14.6□□□□□ -0.07
LITAF-206ENST00000571277 CST9Q5W186 159 aa14.6□□□□□ -0.07
LITAF-206ENST00000571277 GPR101Q96P66 508 aaPredicted RBP14.6□□□□□ -0.07
LITAF-206ENST00000571277 STK31Q9BXU1 1019 aa14.6□□□□□ -0.07
LITAF-206ENST00000571277 DBNDD1Q9H9R9 158 aa14.6□□□□□ -0.07
LITAF-206ENST00000571277 KCNQ5Q9NR82 932 aa14.6□□□□□ -0.07
LITAF-206ENST00000571277 RTL9Q8NET4 1388 aa14.6□□□□□ -0.07
LITAF-206ENST00000571277 C6orf229H3BNL8 230 aa14.59□□□□□ -0.07
LITAF-206ENST00000571277 PSMD14O00487 310 aa14.59□□□□□ -0.07
LITAF-206ENST00000571277 RIMBP2O15034 1052 aa14.59□□□□□ -0.07
LITAF-206ENST00000571277 SLC4A2P04920 1241 aa14.59□□□□□ -0.07
LITAF-206ENST00000571277 CWF19L2Q2TBE0 894 aaKnown RBP14.59□□□□□ -0.07
LITAF-206ENST00000571277 TRPM4Q8TD43 1214 aa14.59□□□□□ -0.07
LITAF-206ENST00000571277 ZBTB12Q9Y330 459 aaPredicted RBP14.59□□□□□ -0.07
LITAF-206ENST00000571277 CACNA1FO60840 1977 aa14.59□□□□□ -0.07
LITAF-206ENST00000571277 THSD7BQ9C0I4 1608 aa14.59□□□□□ -0.07
LITAF-206ENST00000571277 NEURL1BA8MQ27 555 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms