RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 TM4SF1P30408 202 aa21.2■□□□□ 0.98
RPAIN-208ENST00000571043 PARP10Q53GL7 1025 aa21.2■□□□□ 0.98
RPAIN-208ENST00000571043 SETDB2Q96T68 719 aa21.19■□□□□ 0.98
RPAIN-208ENST00000571043 TBC1D2Q9BYX2 928 aa21.19■□□□□ 0.98
RPAIN-208ENST00000571043 PDGFDQ9GZP0 370 aaPredicted RBP21.19■□□□□ 0.98
RPAIN-208ENST00000571043 CASP7P55210 303 aa21.19■□□□□ 0.98
RPAIN-208ENST00000571043 RABL6Q3YEC7 729 aaPredicted RBP21.19■□□□□ 0.98
RPAIN-208ENST00000571043 CLASRPQ8N2M8 674 aaKnown RBP21.19■□□□□ 0.98
RPAIN-208ENST00000571043 SLC16A10Q8TF71 515 aa21.19■□□□□ 0.98
RPAIN-208ENST00000571043 H7C1W4 665 aa21.18■□□□□ 0.98
RPAIN-208ENST00000571043 G3BP1Q13283 466 aaKnown RBP eCLIP21.18■□□□□ 0.98
RPAIN-208ENST00000571043 NFIXQ14938 502 aa21.18■□□□□ 0.98
RPAIN-208ENST00000571043 BICDL1Q6ZP65 573 aa21.18■□□□□ 0.98
RPAIN-208ENST00000571043 NUTM1Q86Y26 1132 aa21.18■□□□□ 0.98
RPAIN-208ENST00000571043 TTC41PQ6P2S7 1318 aa21.17■□□□□ 0.98
RPAIN-208ENST00000571043 REC8O95072 547 aa21.17■□□□□ 0.98
RPAIN-208ENST00000571043 R3HDM1Q15032 1099 aaKnown RBP21.17■□□□□ 0.98
RPAIN-208ENST00000571043 EPHA10Q5JZY3 1008 aa21.17■□□□□ 0.98
RPAIN-208ENST00000571043 SUSD4Q5VX71 490 aa21.17■□□□□ 0.98
RPAIN-208ENST00000571043 TSHZ3Q63HK5 1081 aa21.17■□□□□ 0.98
RPAIN-208ENST00000571043 SNX21Q969T3 373 aa21.17■□□□□ 0.98
RPAIN-208ENST00000571043 PA2G4Q9UQ80 394 aaKnown RBP21.17■□□□□ 0.98
RPAIN-208ENST00000571043 ERC2O15083 957 aa21.16■□□□□ 0.98
RPAIN-208ENST00000571043 UBE3BQ7Z3V4 1068 aa21.16■□□□□ 0.98
RPAIN-208ENST00000571043 ZBTB38Q8NAP3 1195 aaPredicted RBP21.16■□□□□ 0.98
RPAIN-208ENST00000571043 PI4K2BQ8TCG2 481 aa21.16■□□□□ 0.98
RPAIN-208ENST00000571043 USP26Q9BXU7 913 aa21.16■□□□□ 0.98
RPAIN-208ENST00000571043 PCCAP05165 728 aaPredicted RBP21.15■□□□□ 0.98
RPAIN-208ENST00000571043 UTP14AQ9BVJ6 771 aaKnown RBP21.15■□□□□ 0.98
RPAIN-208ENST00000571043 COPRSQ9NQ92 184 aa21.15■□□□□ 0.98
RPAIN-208ENST00000571043 SOCS7O14512 581 aa21.14■□□□□ 0.98
RPAIN-208ENST00000571043 KIF2CQ99661 725 aa21.14■□□□□ 0.98
RPAIN-208ENST00000571043 TRMT112Q9UI30 125 aaKnown RBP21.14■□□□□ 0.98
RPAIN-208ENST00000571043 COL24A1Q17RW2 1714 aa21.14■□□□□ 0.97
RPAIN-208ENST00000571043 TRIM6-TRIM34B2RNG4 842 aa21.14■□□□□ 0.97
RPAIN-208ENST00000571043 NTSR2O95665 410 aa21.14■□□□□ 0.97
RPAIN-208ENST00000571043 FAM89AQ96GI7 184 aa21.14■□□□□ 0.97
RPAIN-208ENST00000571043 GPATCH3Q96I76 525 aa21.14■□□□□ 0.97
RPAIN-208ENST00000571043 CASZ1Q86V15 1759 aa21.13■□□□□ 0.97
RPAIN-208ENST00000571043 GLRX3O76003 335 aaKnown RBP21.13■□□□□ 0.97
RPAIN-208ENST00000571043 SASH1O94885 1247 aa21.13■□□□□ 0.97
RPAIN-208ENST00000571043 RFX5P48382 616 aaPredicted RBP21.13■□□□□ 0.97
RPAIN-208ENST00000571043 TPTE2Q6XPS3 522 aa21.13■□□□□ 0.97
RPAIN-208ENST00000571043 NYXQ9GZU5 481 aa21.13■□□□□ 0.97
RPAIN-208ENST00000571043 CARMIL3Q8ND23 1372 aa21.13■□□□□ 0.97
RPAIN-208ENST00000571043 POLRMTO00411 1230 aaKnown RBP21.12■□□□□ 0.97
RPAIN-208ENST00000571043 IFIT2P09913 472 aaKnown RBP21.12■□□□□ 0.97
RPAIN-208ENST00000571043 CHMLP26374 656 aa21.12■□□□□ 0.97
RPAIN-208ENST00000571043 HSCBQ8IWL3 235 aa21.12■□□□□ 0.97
RPAIN-208ENST00000571043 JARID2Q92833 1246 aaPredicted RBP21.12■□□□□ 0.97
RPAIN-208ENST00000571043 RILPL2Q969X0 211 aa21.12■□□□□ 0.97
RPAIN-208ENST00000571043 FAM177BA6PVY3 158 aa21.11■□□□□ 0.97
RPAIN-208ENST00000571043 SERPINB2P05120 415 aa21.11■□□□□ 0.97
RPAIN-208ENST00000571043 DDR1Q08345 913 aa21.11■□□□□ 0.97
RPAIN-208ENST00000571043 RTL5Q5HYW3 569 aaPredicted RBP21.11■□□□□ 0.97
RPAIN-208ENST00000571043 MSL1Q68DK7 614 aa21.11■□□□□ 0.97
RPAIN-208ENST00000571043 NBPF5PQ86XG9 351 aaPredicted RBP21.11■□□□□ 0.97
RPAIN-208ENST00000571043 SYNE4Q8N205 404 aa21.11■□□□□ 0.97
RPAIN-208ENST00000571043 ESYT1Q9BSJ8 1104 aa21.11■□□□□ 0.97
RPAIN-208ENST00000571043 ECHDC1Q9NTX5 307 aa21.11■□□□□ 0.97
RPAIN-208ENST00000571043 SH3TC1Q8TE82 1336 aa21.11■□□□□ 0.97
RPAIN-208ENST00000571043 CDHR2Q9BYE9 1310 aa21.11■□□□□ 0.97
RPAIN-208ENST00000571043 PSDA5PKW4 1024 aaPredicted RBP21.1■□□□□ 0.97
RPAIN-208ENST00000571043 MMP10P09238 476 aa21.1■□□□□ 0.97
RPAIN-208ENST00000571043 CNTROBQ8N137 903 aa21.1■□□□□ 0.97
RPAIN-208ENST00000571043 EPB41L2O43491 1005 aaKnown RBP21.09■□□□□ 0.97
RPAIN-208ENST00000571043 FOXO4P98177 505 aa21.09■□□□□ 0.97
RPAIN-208ENST00000571043 PTPN12Q05209 780 aaKnown RBP21.09■□□□□ 0.97
RPAIN-208ENST00000571043 SLC10A5Q5PT55 438 aa21.09■□□□□ 0.97
RPAIN-208ENST00000571043 AACSQ86V21 672 aa21.09■□□□□ 0.97
RPAIN-208ENST00000571043 PLA2G12BQ9BX93 195 aa21.09■□□□□ 0.97
RPAIN-208ENST00000571043 MTFR1LQ9H019 292 aa21.09■□□□□ 0.97
RPAIN-208ENST00000571043 IRS4O14654 1257 aaPredicted RBP21.08■□□□□ 0.96
RPAIN-208ENST00000571043 RABEP1Q15276 862 aa21.08■□□□□ 0.96
RPAIN-208ENST00000571043 LMBR1LQ6UX01 489 aa21.08■□□□□ 0.96
RPAIN-208ENST00000571043 PARP3Q9Y6F1 533 aa21.08■□□□□ 0.96
RPAIN-208ENST00000571043 MYH3P11055 1940 aa21.07■□□□□ 0.96
RPAIN-208ENST00000571043 GTF2E1P29083 439 aaPredicted RBP21.07■□□□□ 0.96
RPAIN-208ENST00000571043 ERFEQ4G0M1 354 aa21.07■□□□□ 0.96
RPAIN-208ENST00000571043 PRR5LQ6MZQ0 368 aa21.07■□□□□ 0.96
RPAIN-208ENST00000571043 EAF2Q96CJ1 260 aaPredicted RBP21.07■□□□□ 0.96
RPAIN-208ENST00000571043 SIL1Q9H173 461 aa21.07■□□□□ 0.96
RPAIN-208ENST00000571043 NRXN2Q9P2S2 1712 aa21.07■□□□□ 0.96
RPAIN-208ENST00000571043 ZBTB7AO95365 584 aa21.06■□□□□ 0.96
RPAIN-208ENST00000571043 HSP90B1P14625 803 aaKnown RBP21.06■□□□□ 0.96
RPAIN-208ENST00000571043 CNBD1Q8NA66 436 aa21.06■□□□□ 0.96
RPAIN-208ENST00000571043 KLHDC4Q8TBB5 520 aa21.06■□□□□ 0.96
RPAIN-208ENST00000571043 PDE8AO60658 829 aa21.05■□□□□ 0.96
RPAIN-208ENST00000571043 NBR1Q14596 966 aa21.05■□□□□ 0.96
RPAIN-208ENST00000571043 ANTXR1Q9H6X2 564 aa21.05■□□□□ 0.96
RPAIN-208ENST00000571043 DDX60Q8IY21 1712 aaKnown RBP21.05■□□□□ 0.96
RPAIN-208ENST00000571043 HCLS1P14317 486 aaPredicted RBP21.04■□□□□ 0.96
RPAIN-208ENST00000571043 CSF1RP07333 972 aa21.04■□□□□ 0.96
RPAIN-208ENST00000571043 NPHP1O15259 732 aa21.03■□□□□ 0.96
RPAIN-208ENST00000571043 EVI5LQ96CN4 794 aa21.03■□□□□ 0.96
RPAIN-208ENST00000571043 ATF5Q9Y2D1 282 aaPredicted RBP21.03■□□□□ 0.96
RPAIN-208ENST00000571043 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.03■□□□□ 0.96
RPAIN-208ENST00000571043 LAMB2P55268 1798 aa21.03■□□□□ 0.96
RPAIN-208ENST00000571043 MCCP23508 829 aa21.02■□□□□ 0.96
RPAIN-208ENST00000571043 ST5P78524 1137 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms