RNA–Protein interactions for RNA: ENST00000570989.1

ITGA3-216, Transcript of integrin subunit alpha 3, humanhuman

Gene ITGA3, Length 2,495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-216ENST00000570989 ZSCAN25Q6NSZ9 544 aa17.2■□□□□ 0.34
ITGA3-216ENST00000570989 ADAMTS7Q9UKP4 1686 aa17.2■□□□□ 0.34
ITGA3-216ENST00000570989 RNMTO43148 476 aaKnown RBP17.2■□□□□ 0.34
ITGA3-216ENST00000570989 ANO6Q4KMQ2 910 aa17.2■□□□□ 0.34
ITGA3-216ENST00000570989 RBM43Q6ZSC3 357 aaKnown RBP17.2■□□□□ 0.34
ITGA3-216ENST00000570989 CKAP2LQ8IYA6 745 aa17.2■□□□□ 0.34
ITGA3-216ENST00000570989 DDX54Q8TDD1 881 aaKnown RBP17.2■□□□□ 0.34
ITGA3-216ENST00000570989 SRGAP3O43295 1099 aa17.19■□□□□ 0.34
ITGA3-216ENST00000570989 EIF4A1P60842 406 aaKnown RBP17.19■□□□□ 0.34
ITGA3-216ENST00000570989 FERMT3Q86UX7 667 aa17.19■□□□□ 0.34
ITGA3-216ENST00000570989 PHAXQ9H814 394 aaKnown RBP17.19■□□□□ 0.34
ITGA3-216ENST00000570989 NLRP2Q9NX02 1062 aa17.19■□□□□ 0.34
ITGA3-216ENST00000570989 TPCN1Q9ULQ1 816 aa17.19■□□□□ 0.34
ITGA3-216ENST00000570989 CYP46A1Q9Y6A2 500 aa17.19■□□□□ 0.34
ITGA3-216ENST00000570989 SIPA1L3O60292 1781 aaPredicted RBP17.19■□□□□ 0.34
ITGA3-216ENST00000570989 CPDO75976 1380 aa17.19■□□□□ 0.34
ITGA3-216ENST00000570989 CCDC171Q6TFL3 1326 aa17.19■□□□□ 0.34
ITGA3-216ENST00000570989 KRT85P78386 507 aa17.19■□□□□ 0.34
ITGA3-216ENST00000570989 CHRNA2Q15822 529 aa17.19■□□□□ 0.34
ITGA3-216ENST00000570989 HDGFL1Q5TGJ6 251 aa17.19■□□□□ 0.34
ITGA3-216ENST00000570989 DACT1Q9NYF0 836 aa17.19■□□□□ 0.34
ITGA3-216ENST00000570989 TDRD7Q8NHU6 1098 aaKnown RBP17.18■□□□□ 0.34
ITGA3-216ENST00000570989 IPO4Q8TEX9 1081 aaKnown RBP17.18■□□□□ 0.34
ITGA3-216ENST00000570989 SOS2Q07890 1332 aaPredicted RBP17.18■□□□□ 0.34
ITGA3-216ENST00000570989 MEGF6O75095 1541 aa17.18■□□□□ 0.34
ITGA3-216ENST00000570989 BTBD11A6QL63 1104 aa17.18■□□□□ 0.34
ITGA3-216ENST00000570989 NBPF7P0C2Y1 421 aaPredicted RBP17.18■□□□□ 0.34
ITGA3-216ENST00000570989 NECTIN1Q15223 517 aa17.18■□□□□ 0.34
ITGA3-216ENST00000570989 RAPGEF4Q8WZA2 1011 aa17.18■□□□□ 0.34
ITGA3-216ENST00000570989 KCNQ3O43525 872 aa17.17■□□□□ 0.34
ITGA3-216ENST00000570989 TNNT1P13805 278 aa17.17■□□□□ 0.34
ITGA3-216ENST00000570989 LARP1BQ659C4 914 aaKnown RBP17.17■□□□□ 0.34
ITGA3-216ENST00000570989 TNMDQ9H2S6 317 aa17.17■□□□□ 0.34
ITGA3-216ENST00000570989 DDX41Q9UJV9 622 aaKnown RBP17.17■□□□□ 0.34
ITGA3-216ENST00000570989 TTC41PQ6P2S7 1318 aa17.17■□□□□ 0.34
ITGA3-216ENST00000570989 HOXB7P09629 217 aa17.16■□□□□ 0.34
ITGA3-216ENST00000570989 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.16■□□□□ 0.34
ITGA3-216ENST00000570989 CACTINQ8WUQ7 758 aaKnown RBP17.16■□□□□ 0.34
ITGA3-216ENST00000570989 GLRX3O76003 335 aaKnown RBP17.16■□□□□ 0.34
ITGA3-216ENST00000570989 CCDC144BQ3MJ40 725 aa17.16■□□□□ 0.34
ITGA3-216ENST00000570989 CCDC144CPQ8IYA2 1237 aa17.16■□□□□ 0.34
ITGA3-216ENST00000570989 CLSTN2Q9H4D0 955 aa17.16■□□□□ 0.34
ITGA3-216ENST00000570989 CSB-PGBD3P0DP91 1061 aa17.15■□□□□ 0.34
ITGA3-216ENST00000570989 TRIM5Q9C035 493 aa17.15■□□□□ 0.34
ITGA3-216ENST00000570989 RUFY2Q8WXA3 655 aa17.15■□□□□ 0.34
ITGA3-216ENST00000570989 DRC7Q8IY82 874 aa17.14■□□□□ 0.34
ITGA3-216ENST00000570989 SCN11AQ9UI33 1791 aa17.14■□□□□ 0.34
ITGA3-216ENST00000570989 CREB3L3Q68CJ9 461 aa17.14■□□□□ 0.33
ITGA3-216ENST00000570989 LEO1Q8WVC0 666 aaPredicted RBP17.14■□□□□ 0.33
ITGA3-216ENST00000570989 DDX19AQ9NUU7 478 aaKnown RBP17.14■□□□□ 0.33
ITGA3-216ENST00000570989 CGNQ9P2M7 1197 aaKnown RBP17.14■□□□□ 0.33
ITGA3-216ENST00000570989 PAXBP1Q9Y5B6 917 aa17.14■□□□□ 0.33
ITGA3-216ENST00000570989 RBM8AQ9Y5S9 174 aaKnown RBP17.14■□□□□ 0.33
ITGA3-216ENST00000570989 TATP17735 454 aaPredicted RBP17.13■□□□□ 0.33
ITGA3-216ENST00000570989 EIF2S2P20042 333 aaKnown RBP17.13■□□□□ 0.33
ITGA3-216ENST00000570989 GABPB1Q06547 395 aaPredicted RBP17.13■□□□□ 0.33
ITGA3-216ENST00000570989 TFIP11Q9UBB9 837 aaKnown RBP17.13■□□□□ 0.33
ITGA3-216ENST00000570989 MORC2Q9Y6X9 1032 aaPredicted RBP17.13■□□□□ 0.33
ITGA3-216ENST00000570989 ABCA3Q99758 1704 aa17.13■□□□□ 0.33
ITGA3-216ENST00000570989 PLEKHG2Q9H7P9 1386 aa17.13■□□□□ 0.33
ITGA3-216ENST00000570989 CCDC112Q8NEF3 446 aa17.13■□□□□ 0.33
ITGA3-216ENST00000570989 PGBD1Q96JS3 809 aa17.13■□□□□ 0.33
ITGA3-216ENST00000570989 DNAJC25Q9H1X3 360 aa17.13■□□□□ 0.33
ITGA3-216ENST00000570989 KDM6AO15550 1401 aaPredicted RBP17.13■□□□□ 0.33
ITGA3-216ENST00000570989 PKD1L3Q7Z443 1732 aa17.13■□□□□ 0.33
ITGA3-216ENST00000570989 NR1I2O75469 434 aa17.12■□□□□ 0.33
ITGA3-216ENST00000570989 SLFN14P0C7P3 912 aa17.12■□□□□ 0.33
ITGA3-216ENST00000570989 BEND3Q5T5X7 828 aa17.12■□□□□ 0.33
ITGA3-216ENST00000570989 KIF18AQ8NI77 898 aa17.12■□□□□ 0.33
ITGA3-216ENST00000570989 SPATA32Q96LK8 384 aa17.12■□□□□ 0.33
ITGA3-216ENST00000570989 SCAND2PQ9GZW5 306 aaPredicted RBP17.12■□□□□ 0.33
ITGA3-216ENST00000570989 ZNF165P49910 485 aa17.12■□□□□ 0.33
ITGA3-216ENST00000570989 LARP1Q6PKG0 1096 aaKnown RBP17.12■□□□□ 0.33
ITGA3-216ENST00000570989 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.12■□□□□ 0.33
ITGA3-216ENST00000570989 CHPF2Q9P2E5 772 aa17.12■□□□□ 0.33
ITGA3-216ENST00000570989 CLIP2Q9UDT6 1046 aa17.12■□□□□ 0.33
ITGA3-216ENST00000570989 LRP6O75581 1613 aa17.11■□□□□ 0.33
ITGA3-216ENST00000570989 CDC25BP30305 580 aa17.11■□□□□ 0.33
ITGA3-216ENST00000570989 MAP4K1Q92918 833 aa17.11■□□□□ 0.33
ITGA3-216ENST00000570989 ECHDC1Q9NTX5 307 aa17.11■□□□□ 0.33
ITGA3-216ENST00000570989 TAF6LQ9Y6J9 622 aa17.11■□□□□ 0.33
ITGA3-216ENST00000570989 JCADQ9P266 1359 aa17.11■□□□□ 0.33
ITGA3-216ENST00000570989 HEG1Q9ULI3 1381 aa17.11■□□□□ 0.33
ITGA3-216ENST00000570989 USP27XA6NNY8 438 aa17.11■□□□□ 0.33
ITGA3-216ENST00000570989 PDCP20941 246 aa17.11■□□□□ 0.33
ITGA3-216ENST00000570989 TPD52L1Q16890 204 aaPredicted RBP17.11■□□□□ 0.33
ITGA3-216ENST00000570989 HSP90AB4PQ58FF6 505 aa17.11■□□□□ 0.33
ITGA3-216ENST00000570989 PAXIP1Q6ZW49 1069 aaPredicted RBP17.11■□□□□ 0.33
ITGA3-216ENST00000570989 FAM227BQ96M60 508 aa17.11■□□□□ 0.33
ITGA3-216ENST00000570989 CHMP4AQ9BY43 222 aa17.11■□□□□ 0.33
ITGA3-216ENST00000570989 SLC27A2O14975 620 aa17.1■□□□□ 0.33
ITGA3-216ENST00000570989 PHKG2P15735 406 aa17.1■□□□□ 0.33
ITGA3-216ENST00000570989 ZKSCAN1P17029 563 aaPredicted RBP17.1■□□□□ 0.33
ITGA3-216ENST00000570989 ARID5BQ14865 1188 aa17.1■□□□□ 0.33
ITGA3-216ENST00000570989 TAF3Q5VWG9 929 aa17.1■□□□□ 0.33
ITGA3-216ENST00000570989 ZNF771Q7L3S4 317 aaPredicted RBP17.1■□□□□ 0.33
ITGA3-216ENST00000570989 TCEANC2Q96MN5 208 aa17.1■□□□□ 0.33
ITGA3-216ENST00000570989 PRDM11Q9NQV5 511 aa17.1■□□□□ 0.33
ITGA3-216ENST00000570989 CEP135Q66GS9 1140 aa17.1■□□□□ 0.33
ITGA3-216ENST00000570989 ADCY9O60503 1353 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms