RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 POTEIP0CG38 1075 aa6.95□□□□□ -1.3
CHD3-212ENST00000570758 POTEJP0CG39 1038 aa6.95□□□□□ -1.3
CHD3-212ENST00000570758 FLIIQ13045 1269 aa6.95□□□□□ -1.3
CHD3-212ENST00000570758 AOC3Q16853 763 aa6.95□□□□□ -1.3
CHD3-212ENST00000570758 GRIPAP1Q4V328 841 aa6.95□□□□□ -1.3
CHD3-212ENST00000570758 LARGE2Q8N3Y3 721 aa6.95□□□□□ -1.3
CHD3-212ENST00000570758 CELF1Q92879 486 aaKnown RBP6.95□□□□□ -1.3
CHD3-212ENST00000570758 L3MBTL3Q96JM7 780 aaPredicted RBP6.95□□□□□ -1.3
CHD3-212ENST00000570758 RTFDC1Q9BY42 306 aaPredicted RBP6.95□□□□□ -1.3
CHD3-212ENST00000570758 CHMP4AQ9BY43 222 aa6.95□□□□□ -1.3
CHD3-212ENST00000570758 CWC25Q9NXE8 425 aaPredicted RBP6.95□□□□□ -1.3
CHD3-212ENST00000570758 ZNF521Q96K83 1311 aa6.95□□□□□ -1.3
CHD3-212ENST00000570758 NEURL1BA8MQ27 555 aa6.94□□□□□ -1.3
CHD3-212ENST00000570758 PPIP5K2O43314 1243 aa6.94□□□□□ -1.3
CHD3-212ENST00000570758 PDE8AO60658 829 aa6.94□□□□□ -1.3
CHD3-212ENST00000570758 APLP1P51693 650 aa6.94□□□□□ -1.3
CHD3-212ENST00000570758 HTRA3P83110 453 aa6.94□□□□□ -1.3
CHD3-212ENST00000570758 CWF19L2Q2TBE0 894 aaKnown RBP6.94□□□□□ -1.3
CHD3-212ENST00000570758 DPP8Q6V1X1 898 aaPredicted RBP6.94□□□□□ -1.3
CHD3-212ENST00000570758 MPNDQ8N594 471 aa6.94□□□□□ -1.3
CHD3-212ENST00000570758 SMC1BQ8NDV3 1235 aa6.94□□□□□ -1.3
CHD3-212ENST00000570758 CCDC85AQ96PX6 553 aaPredicted RBP6.94□□□□□ -1.3
CHD3-212ENST00000570758 TAF1DQ9H5J8 278 aaPredicted RBP6.94□□□□□ -1.3
CHD3-212ENST00000570758 MYH16Q9H6N6 1097 aa6.94□□□□□ -1.3
CHD3-212ENST00000570758 SEC31BQ9NQW1 1179 aa6.94□□□□□ -1.3
CHD3-212ENST00000570758 DUOX1Q9NRD9 1551 aa6.94□□□□□ -1.3
CHD3-212ENST00000570758 EIF6P56537 245 aaKnown RBP6.93□□□□□ -1.3
CHD3-212ENST00000570758 GPSM2P81274 684 aa6.93□□□□□ -1.3
CHD3-212ENST00000570758 NIM1KQ8IY84 436 aa6.93□□□□□ -1.3
CHD3-212ENST00000570758 DNAJC5GQ8N7S2 189 aa6.93□□□□□ -1.3
CHD3-212ENST00000570758 SUPT20HQ8NEM7 779 aa6.93□□□□□ -1.3
CHD3-212ENST00000570758 JDP2Q8WYK2 163 aa6.93□□□□□ -1.3
CHD3-212ENST00000570758 GPR101Q96P66 508 aaPredicted RBP6.93□□□□□ -1.3
CHD3-212ENST00000570758 TMX4Q9H1E5 349 aaPredicted RBP6.93□□□□□ -1.3
CHD3-212ENST00000570758 GJA3Q9Y6H8 435 aa6.93□□□□□ -1.3
CHD3-212ENST00000570758 CDHR2Q9BYE9 1310 aa6.93□□□□□ -1.3
CHD3-212ENST00000570758 LRRC37AA6NMS7 1700 aa6.93□□□□□ -1.3
CHD3-212ENST00000570758 LTBP1Q14766 1721 aa6.93□□□□□ -1.3
CHD3-212ENST00000570758 IQCA1LA6NCM1 817 aa6.92□□□□□ -1.3
CHD3-212ENST00000570758 F6X3S4 739 aa6.92□□□□□ -1.3
CHD3-212ENST00000570758 H7C1W4 665 aa6.92□□□□□ -1.3
CHD3-212ENST00000570758 EPHX2P34913 555 aa6.92□□□□□ -1.3
CHD3-212ENST00000570758 CASP7P55210 303 aa6.92□□□□□ -1.3
CHD3-212ENST00000570758 CTSWP56202 376 aa6.92□□□□□ -1.3
CHD3-212ENST00000570758 RPS8P62241 208 aaKnown RBP6.92□□□□□ -1.3
CHD3-212ENST00000570758 CXCL9Q07325 125 aa6.92□□□□□ -1.3
CHD3-212ENST00000570758 KIAA2012Q0VF49 1180 aa6.92□□□□□ -1.3
CHD3-212ENST00000570758 NEXNQ0ZGT2 675 aa6.92□□□□□ -1.3
CHD3-212ENST00000570758 FKBP5Q13451 457 aaPredicted RBP6.92□□□□□ -1.3
CHD3-212ENST00000570758 GCKRQ14397 625 aa6.92□□□□□ -1.3
CHD3-212ENST00000570758 CCDC152Q4G0S7 254 aa6.92□□□□□ -1.3
CHD3-212ENST00000570758 CHADLQ6NUI6 762 aa6.92□□□□□ -1.3
CHD3-212ENST00000570758 TMC4Q7Z404 712 aa6.92□□□□□ -1.3
CHD3-212ENST00000570758 GPC2Q8N158 579 aa6.92□□□□□ -1.3
CHD3-212ENST00000570758 DNAAF4Q8WXU2 420 aa6.92□□□□□ -1.3
CHD3-212ENST00000570758 VPS33BQ9H267 617 aa6.92□□□□□ -1.3
CHD3-212ENST00000570758 POLLQ9UGP5 575 aa6.92□□□□□ -1.3
CHD3-212ENST00000570758 HACL1Q9UJ83 578 aa6.92□□□□□ -1.3
CHD3-212ENST00000570758 ZNRF3Q9ULT6 936 aa6.92□□□□□ -1.3
CHD3-212ENST00000570758 YDJCA8MPS7 323 aa6.91□□□□□ -1.3
CHD3-212ENST00000570758 CCER2I3L3R5 266 aa6.91□□□□□ -1.3
CHD3-212ENST00000570758 RIMBP2O15034 1052 aa6.91□□□□□ -1.3
CHD3-212ENST00000570758 HSP90B1P14625 803 aaKnown RBP6.91□□□□□ -1.3
CHD3-212ENST00000570758 EPS15P42566 896 aa6.91□□□□□ -1.3
CHD3-212ENST00000570758 SCNN1DP51172 638 aa6.91□□□□□ -1.3
CHD3-212ENST00000570758 SLFN5Q08AF3 891 aa6.91□□□□□ -1.3
CHD3-212ENST00000570758 EAPPQ56P03 285 aaPredicted RBP6.91□□□□□ -1.3
CHD3-212ENST00000570758 UBE3BQ7Z3V4 1068 aa6.91□□□□□ -1.3
CHD3-212ENST00000570758 LDHDQ86WU2 507 aa6.91□□□□□ -1.3
CHD3-212ENST00000570758 LINS1Q8NG48 757 aa6.91□□□□□ -1.3
CHD3-212ENST00000570758 TTLL11Q8NHH1 800 aa6.91□□□□□ -1.3
CHD3-212ENST00000570758 CDCA7LQ96GN5 454 aa6.91□□□□□ -1.3
CHD3-212ENST00000570758 GREM2Q9H772 168 aa6.91□□□□□ -1.3
CHD3-212ENST00000570758 NSFL1CQ9UNZ2 370 aaKnown RBP6.91□□□□□ -1.3
CHD3-212ENST00000570758 SCN4AP35499 1836 aa6.91□□□□□ -1.3
CHD3-212ENST00000570758 ADAMTSL1Q8N6G6 1762 aa6.9□□□□□ -1.3
CHD3-212ENST00000570758 E9PSI1 815 aa6.9□□□□□ -1.3
CHD3-212ENST00000570758 C6orf229H3BNL8 230 aa6.9□□□□□ -1.3
CHD3-212ENST00000570758 RAD17O75943 681 aa6.9□□□□□ -1.3
CHD3-212ENST00000570758 GMPSP49915 693 aaPredicted RBP6.9□□□□□ -1.3
CHD3-212ENST00000570758 DOK7Q18PE1 504 aa6.9□□□□□ -1.3
CHD3-212ENST00000570758 WASHC4Q2M389 1173 aa6.9□□□□□ -1.3
CHD3-212ENST00000570758 BEND3Q5T5X7 828 aa6.9□□□□□ -1.3
CHD3-212ENST00000570758 ANKRD18AQ8IVF6 992 aa6.9□□□□□ -1.3
CHD3-212ENST00000570758 MRPL50Q8N5N7 158 aaKnown RBP6.9□□□□□ -1.3
CHD3-212ENST00000570758 TBC1D16Q8TBP0 767 aa6.9□□□□□ -1.3
CHD3-212ENST00000570758 PLA2G12BQ9BX93 195 aa6.9□□□□□ -1.3
CHD3-212ENST00000570758 DBNDD1Q9H9R9 158 aa6.9□□□□□ -1.3
CHD3-212ENST00000570758 RTL9Q8NET4 1388 aa6.9□□□□□ -1.31
CHD3-212ENST00000570758 CACNA1FO60840 1977 aa6.89□□□□□ -1.31
CHD3-212ENST00000570758 SHTN1A0MZ66 631 aa6.89□□□□□ -1.31
CHD3-212ENST00000570758 WTIPA6NIX2 430 aaPredicted RBP6.89□□□□□ -1.31
CHD3-212ENST00000570758 UFL1O94874 794 aa6.89□□□□□ -1.31
CHD3-212ENST00000570758 ITGBL1O95965 494 aaPredicted RBP6.89□□□□□ -1.31
CHD3-212ENST00000570758 CSF1RP07333 972 aa6.89□□□□□ -1.31
CHD3-212ENST00000570758 LMOD1P29536 600 aaPredicted RBP6.89□□□□□ -1.31
CHD3-212ENST00000570758 FAM161AQ3B820 660 aa6.89□□□□□ -1.31
CHD3-212ENST00000570758 MAP1SQ66K74 1059 aaPredicted RBP6.89□□□□□ -1.31
CHD3-212ENST00000570758 CIAPIN1Q6FI81 312 aa6.89□□□□□ -1.31
CHD3-212ENST00000570758 TRMT2AQ8IZ69 625 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms