RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 PDE8AO60658 829 aa14.21□□□□□ -0.13
SMG6-206ENST00000570668 PPP4R3CPQ6ZMV5 832 aa14.21□□□□□ -0.13
SMG6-206ENST00000570668 TMC4Q7Z404 712 aa14.21□□□□□ -0.13
SMG6-206ENST00000570668 SP8Q8IXZ3 490 aa14.21□□□□□ -0.13
SMG6-206ENST00000570668 TMX4Q9H1E5 349 aaPredicted RBP14.21□□□□□ -0.13
SMG6-206ENST00000570668 ZNF277Q9NRM2 450 aaPredicted RBP14.21□□□□□ -0.13
SMG6-206ENST00000570668 TIAM2Q8IVF5 1701 aa14.21□□□□□ -0.14
SMG6-206ENST00000570668 H7C1W4 665 aa14.2□□□□□ -0.14
SMG6-206ENST00000570668 C1QTNF8P60827 252 aa14.2□□□□□ -0.14
SMG6-206ENST00000570668 GCKRQ14397 625 aa14.2□□□□□ -0.14
SMG6-206ENST00000570668 SLC51AQ86UW1 340 aa14.2□□□□□ -0.14
SMG6-206ENST00000570668 JARID2Q92833 1246 aaPredicted RBP14.2□□□□□ -0.14
SMG6-206ENST00000570668 NMRK2Q9NPI5 230 aa14.2□□□□□ -0.14
SMG6-206ENST00000570668 TAF1P21675 1872 aa14.19□□□□□ -0.14
SMG6-206ENST00000570668 F6X3S4 739 aa14.19□□□□□ -0.14
SMG6-206ENST00000570668 CT47B1P0C2W7 299 aaPredicted RBP14.19□□□□□ -0.14
SMG6-206ENST00000570668 IARSP41252 1262 aaKnown RBP14.19□□□□□ -0.14
SMG6-206ENST00000570668 DPY19L2Q6NUT2 758 aa14.19□□□□□ -0.14
SMG6-206ENST00000570668 MRPL50Q8N5N7 158 aaKnown RBP14.19□□□□□ -0.14
SMG6-206ENST00000570668 CELF1Q92879 486 aaKnown RBP14.19□□□□□ -0.14
SMG6-206ENST00000570668 CCDC152Q4G0S7 254 aa14.18□□□□□ -0.14
SMG6-206ENST00000570668 BEND3Q5T5X7 828 aa14.18□□□□□ -0.14
SMG6-206ENST00000570668 SSH1Q8WYL5 1049 aa14.18□□□□□ -0.14
SMG6-206ENST00000570668 RTFDC1Q9BY42 306 aaPredicted RBP14.18□□□□□ -0.14
SMG6-206ENST00000570668 CASP7P55210 303 aa14.17□□□□□ -0.14
SMG6-206ENST00000570668 CTSWP56202 376 aa14.17□□□□□ -0.14
SMG6-206ENST00000570668 RPS8P62241 208 aaKnown RBP14.17□□□□□ -0.14
SMG6-206ENST00000570668 ALDH1L2Q3SY69 923 aa14.17□□□□□ -0.14
SMG6-206ENST00000570668 UBE3BQ7Z3V4 1068 aa14.17□□□□□ -0.14
SMG6-206ENST00000570668 PLA2G12BQ9BX93 195 aa14.17□□□□□ -0.14
SMG6-206ENST00000570668 VPS33BQ9H267 617 aa14.17□□□□□ -0.14
SMG6-206ENST00000570668 RRAGCQ9HB90 399 aa14.17□□□□□ -0.14
SMG6-206ENST00000570668 SEC31BQ9NQW1 1179 aa14.17□□□□□ -0.14
SMG6-206ENST00000570668 LRRC37AA6NMS7 1700 aa14.16□□□□□ -0.14
SMG6-206ENST00000570668 DPP8Q6V1X1 898 aaPredicted RBP14.16□□□□□ -0.14
SMG6-206ENST00000570668 MPNDQ8N594 471 aa14.16□□□□□ -0.14
SMG6-206ENST00000570668 SUPT20HQ8NEM7 779 aa14.16□□□□□ -0.14
SMG6-206ENST00000570668 TTLL11Q8NHH1 800 aa14.16□□□□□ -0.14
SMG6-206ENST00000570668 JDP2Q8WYK2 163 aa14.16□□□□□ -0.14
SMG6-206ENST00000570668 COL4A1P02462 1669 aa14.16□□□□□ -0.14
SMG6-206ENST00000570668 PTPRCP08575 1304 aa14.15□□□□□ -0.14
SMG6-206ENST00000570668 RTL9Q8NET4 1388 aa14.15□□□□□ -0.14
SMG6-206ENST00000570668 FZD9O00144 591 aa14.15□□□□□ -0.14
SMG6-206ENST00000570668 TOMM70O94826 608 aa14.15□□□□□ -0.14
SMG6-206ENST00000570668 VEGFAP15692 232 aaPredicted RBP14.15□□□□□ -0.14
SMG6-206ENST00000570668 HNRNPUQ00839 825 aaKnown RBP eCLIP14.15□□□□□ -0.14
SMG6-206ENST00000570668 MYH3P11055 1940 aa14.15□□□□□ -0.14
SMG6-206ENST00000570668 ALDH1L1O75891 902 aa14.14□□□□□ -0.15
SMG6-206ENST00000570668 DDNO94850 711 aaPredicted RBP14.14□□□□□ -0.15
SMG6-206ENST00000570668 SLC4A10Q6U841 1118 aa14.14□□□□□ -0.15
SMG6-206ENST00000570668 LARGE2Q8N3Y3 721 aa14.14□□□□□ -0.15
SMG6-206ENST00000570668 CCDC85AQ96PX6 553 aaPredicted RBP14.14□□□□□ -0.15
SMG6-206ENST00000570668 BCL2L13Q9BXK5 485 aa14.14□□□□□ -0.15
SMG6-206ENST00000570668 WDR90Q96KV7 1748 aa14.14□□□□□ -0.15
SMG6-206ENST00000570668 COL4A5P29400 1685 aa14.14□□□□□ -0.15
SMG6-206ENST00000570668 POTECB2RU33 542 aa14.13□□□□□ -0.15
SMG6-206ENST00000570668 GRM8O00222 908 aa14.13□□□□□ -0.15
SMG6-206ENST00000570668 PPIP5K2O43314 1243 aa14.13□□□□□ -0.15
SMG6-206ENST00000570668 CSF1RP07333 972 aa14.13□□□□□ -0.15
SMG6-206ENST00000570668 BRPF1P55201 1214 aaPredicted RBP14.13□□□□□ -0.15
SMG6-206ENST00000570668 CDC5LQ99459 802 aaKnown RBP14.13□□□□□ -0.15
SMG6-206ENST00000570668 SRCIN1Q9C0H9 1055 aa14.13□□□□□ -0.15
SMG6-206ENST00000570668 GREM2Q9H772 168 aa14.13□□□□□ -0.15
SMG6-206ENST00000570668 SMC4Q9NTJ3 1288 aa14.13□□□□□ -0.15
SMG6-206ENST00000570668 NSFL1CQ9UNZ2 370 aaKnown RBP14.13□□□□□ -0.15
SMG6-206ENST00000570668 DUOX1Q9NRD9 1551 aa14.13□□□□□ -0.15
SMG6-206ENST00000570668 ZNF541Q9H0D2 1346 aa14.13□□□□□ -0.15
SMG6-206ENST00000570668 KIAA2012Q0VF49 1180 aa14.12□□□□□ -0.15
SMG6-206ENST00000570668 AOC3Q16853 763 aa14.12□□□□□ -0.15
SMG6-206ENST00000570668 ANKRD18AQ8IVF6 992 aa14.12□□□□□ -0.15
SMG6-206ENST00000570668 NIM1KQ8IY84 436 aa14.12□□□□□ -0.15
SMG6-206ENST00000570668 C16orf71Q8IYS4 520 aaPredicted RBP14.12□□□□□ -0.15
SMG6-206ENST00000570668 RBM46Q8TBY0 533 aaKnown RBP14.12□□□□□ -0.15
SMG6-206ENST00000570668 L3MBTL3Q96JM7 780 aaPredicted RBP14.12□□□□□ -0.15
SMG6-206ENST00000570668 PODXL2Q9NZ53 605 aa14.12□□□□□ -0.15
SMG6-206ENST00000570668 EIF6P56537 245 aaKnown RBP14.11□□□□□ -0.15
SMG6-206ENST00000570668 GPSM2P81274 684 aa14.11□□□□□ -0.15
SMG6-206ENST00000570668 FOXO4P98177 505 aa14.11□□□□□ -0.15
SMG6-206ENST00000570668 LTBP1Q14766 1721 aa14.11□□□□□ -0.15
SMG6-206ENST00000570668 GPC2Q8N158 579 aa14.11□□□□□ -0.15
SMG6-206ENST00000570668 C9orf78Q9NZ63 289 aaPredicted RBP14.11□□□□□ -0.15
SMG6-206ENST00000570668 POLLQ9UGP5 575 aa14.11□□□□□ -0.15
SMG6-206ENST00000570668 RARSP54136 660 aaKnown RBP14.1□□□□□ -0.15
SMG6-206ENST00000570668 FAM161AQ3B820 660 aa14.1□□□□□ -0.15
SMG6-206ENST00000570668 TBC1D16Q8TBP0 767 aa14.1□□□□□ -0.15
SMG6-206ENST00000570668 BSDC1Q9NW68 430 aaPredicted RBP14.1□□□□□ -0.15
SMG6-206ENST00000570668 ZNRF3Q9ULT6 936 aa14.1□□□□□ -0.15
SMG6-206ENST00000570668 UTYO14607 1347 aa14.1□□□□□ -0.15
SMG6-206ENST00000570668 IQCA1LA6NCM1 817 aa14.09□□□□□ -0.15
SMG6-206ENST00000570668 C6orf229H3BNL8 230 aa14.09□□□□□ -0.15
SMG6-206ENST00000570668 ITGA6P23229 1130 aa14.09□□□□□ -0.15
SMG6-206ENST00000570668 WASHC4Q2M389 1173 aa14.09□□□□□ -0.15
SMG6-206ENST00000570668 ANKIB1Q9P2G1 1089 aa14.09□□□□□ -0.15
SMG6-206ENST00000570668 ZBED9Q6R2W3 1325 aa14.09□□□□□ -0.15
SMG6-206ENST00000570668 SCN4AP35499 1836 aa14.08□□□□□ -0.15
SMG6-206ENST00000570668 CEP350Q5VT06 3117 aa14.08□□□□□ -0.16
SMG6-206ENST00000570668 FSTL1Q12841 308 aa14.08□□□□□ -0.16
SMG6-206ENST00000570668 EPHA10Q5JZY3 1008 aa14.08□□□□□ -0.16
SMG6-206ENST00000570668 EYA3Q99504 573 aa14.08□□□□□ -0.16
SMG6-206ENST00000570668 GGA1Q9UJY5 639 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms