RNA–Protein interactions for RNA: ENST00000570641.1

SPNS2-202, Transcript of sphingolipid transporter 2, humanhuman

TSL 5

Gene SPNS2, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-202ENST00000570641 RIC1Q4ADV7 1423 aa22.43■■□□□ 1.18
SPNS2-202ENST00000570641 ABCC12Q96J65 1359 aa22.43■■□□□ 1.18
SPNS2-202ENST00000570641 POLRMTO00411 1230 aaKnown RBP22.43■■□□□ 1.18
SPNS2-202ENST00000570641 RFX5P48382 616 aaPredicted RBP22.43■■□□□ 1.18
SPNS2-202ENST00000570641 CCDC57Q2TAC2 916 aa22.43■■□□□ 1.18
SPNS2-202ENST00000570641 COPRSQ9NQ92 184 aa22.43■■□□□ 1.18
SPNS2-202ENST00000570641 EXOC6BQ9Y2D4 811 aa22.43■■□□□ 1.18
SPNS2-202ENST00000570641 NUCB1Q02818 461 aa22.42■■□□□ 1.18
SPNS2-202ENST00000570641 DDR1Q08345 913 aa22.42■■□□□ 1.18
SPNS2-202ENST00000570641 CCDC152Q4G0S7 254 aa22.42■■□□□ 1.18
SPNS2-202ENST00000570641 ANKRD45Q5TZF3 282 aa22.42■■□□□ 1.18
SPNS2-202ENST00000570641 SLC16A10Q8TF71 515 aa22.42■■□□□ 1.18
SPNS2-202ENST00000570641 RTL9Q8NET4 1388 aa22.41■■□□□ 1.18
SPNS2-202ENST00000570641 ST5P78524 1137 aa22.41■■□□□ 1.18
SPNS2-202ENST00000570641 G3BP1Q13283 466 aaKnown RBP eCLIP22.41■■□□□ 1.18
SPNS2-202ENST00000570641 IFIT5Q13325 482 aaKnown RBP22.41■■□□□ 1.18
SPNS2-202ENST00000570641 OS9Q13438 667 aaPredicted RBP22.41■■□□□ 1.18
SPNS2-202ENST00000570641 FAM161AQ3B820 660 aa22.41■■□□□ 1.18
SPNS2-202ENST00000570641 ERC1Q8IUD2 1116 aa22.41■■□□□ 1.18
SPNS2-202ENST00000570641 PARP3Q9Y6F1 533 aa22.41■■□□□ 1.18
SPNS2-202ENST00000570641 ANKRD18BA2A2Z9 1011 aa22.4■■□□□ 1.18
SPNS2-202ENST00000570641 PTPN12Q05209 780 aaKnown RBP22.4■■□□□ 1.18
SPNS2-202ENST00000570641 SF3B3Q15393 1217 aaKnown RBP22.4■■□□□ 1.18
SPNS2-202ENST00000570641 TAF7LQ5H9L4 462 aa22.4■■□□□ 1.18
SPNS2-202ENST00000570641 PRR5LQ6MZQ0 368 aa22.4■■□□□ 1.18
SPNS2-202ENST00000570641 CHD1LQ86WJ1 897 aa22.4■■□□□ 1.18
SPNS2-202ENST00000570641 NLRP3Q96P20 1036 aa22.4■■□□□ 1.18
SPNS2-202ENST00000570641 PA2G4Q9UQ80 394 aaKnown RBP22.4■■□□□ 1.18
SPNS2-202ENST00000570641 MMP10P09238 476 aa22.39■■□□□ 1.17
SPNS2-202ENST00000570641 MSL1Q68DK7 614 aa22.39■■□□□ 1.17
SPNS2-202ENST00000570641 CCDC85AQ96PX6 553 aaPredicted RBP22.39■■□□□ 1.17
SPNS2-202ENST00000570641 LRRCC1Q9C099 1032 aa22.39■■□□□ 1.17
SPNS2-202ENST00000570641 GREM2Q9H772 168 aa22.39■■□□□ 1.17
SPNS2-202ENST00000570641 APBB1O00213 710 aa22.38■■□□□ 1.17
SPNS2-202ENST00000570641 ITGA6P23229 1130 aa22.38■■□□□ 1.17
SPNS2-202ENST00000570641 KIF1BPQ96EK5 621 aa22.38■■□□□ 1.17
SPNS2-202ENST00000570641 FBXO3Q9UK99 471 aa22.38■■□□□ 1.17
SPNS2-202ENST00000570641 TNRC6CQ9HCJ0 1690 aaKnown RBP22.38■■□□□ 1.17
SPNS2-202ENST00000570641 KLHDC4Q8TBB5 520 aa22.37■■□□□ 1.17
SPNS2-202ENST00000570641 LNPKQ9C0E8 428 aa22.37■■□□□ 1.17
SPNS2-202ENST00000570641 SIL1Q9H173 461 aa22.37■■□□□ 1.17
SPNS2-202ENST00000570641 RHPN1Q8TCX5 695 aa22.36■■□□□ 1.17
SPNS2-202ENST00000570641 CIAO1O76071 339 aa22.35■■□□□ 1.17
SPNS2-202ENST00000570641 CCDC24Q8N4L8 307 aa22.35■■□□□ 1.17
SPNS2-202ENST00000570641 SPEF2Q9C093 1822 aa22.35■■□□□ 1.17
SPNS2-202ENST00000570641 ANKRD31Q8N7Z5 1873 aa22.34■■□□□ 1.17
SPNS2-202ENST00000570641 EYA2O00167 538 aa22.34■■□□□ 1.17
SPNS2-202ENST00000570641 ZNF594Q96JF6 807 aaPredicted RBP22.34■■□□□ 1.17
SPNS2-202ENST00000570641 CDC5LQ99459 802 aaKnown RBP22.34■■□□□ 1.17
SPNS2-202ENST00000570641 PSDA5PKW4 1024 aaPredicted RBP22.33■■□□□ 1.17
SPNS2-202ENST00000570641 SMARCA5O60264 1052 aaPredicted RBP22.33■■□□□ 1.17
SPNS2-202ENST00000570641 IL15P40933 162 aaPredicted RBP22.33■■□□□ 1.17
SPNS2-202ENST00000570641 C3orf67Q6ZVT6 689 aa22.33■■□□□ 1.17
SPNS2-202ENST00000570641 PELP1Q8IZL8 1130 aaKnown RBP22.33■■□□□ 1.17
SPNS2-202ENST00000570641 PDGFDQ9GZP0 370 aaPredicted RBP22.33■■□□□ 1.17
SPNS2-202ENST00000570641 RGS3P49796 1198 aa22.32■■□□□ 1.16
SPNS2-202ENST00000570641 BRIP1Q9BX63 1249 aa22.32■■□□□ 1.16
SPNS2-202ENST00000570641 SASH1O94885 1247 aa22.31■■□□□ 1.16
SPNS2-202ENST00000570641 PDE4AP27815 886 aa22.31■■□□□ 1.16
SPNS2-202ENST00000570641 IGHMBP2P38935 993 aaKnown RBP22.31■■□□□ 1.16
SPNS2-202ENST00000570641 R3HDM1Q15032 1099 aaKnown RBP22.31■■□□□ 1.16
SPNS2-202ENST00000570641 LDHAL6AQ6ZMR3 332 aa22.31■■□□□ 1.16
SPNS2-202ENST00000570641 SEC31BQ9NQW1 1179 aa22.31■■□□□ 1.16
SPNS2-202ENST00000570641 TAF1P21675 1872 aa22.3■■□□□ 1.16
SPNS2-202ENST00000570641 DDX46Q7L014 1031 aaKnown RBP22.3■■□□□ 1.16
SPNS2-202ENST00000570641 ATG9AQ7Z3C6 839 aa22.3■■□□□ 1.16
SPNS2-202ENST00000570641 SKAP1Q86WV1 359 aa22.3■■□□□ 1.16
SPNS2-202ENST00000570641 CLASRPQ8N2M8 674 aaKnown RBP22.3■■□□□ 1.16
SPNS2-202ENST00000570641 MPHOSPH8Q99549 860 aa22.3■■□□□ 1.16
SPNS2-202ENST00000570641 IL1RAPL2Q9NP60 686 aa22.3■■□□□ 1.16
SPNS2-202ENST00000570641 CNNM1Q9NRU3 951 aa22.3■■□□□ 1.16
SPNS2-202ENST00000570641 LRRC24Q50LG9 513 aa22.29■■□□□ 1.16
SPNS2-202ENST00000570641 ANKRD18AQ8IVF6 992 aa22.29■■□□□ 1.16
SPNS2-202ENST00000570641 RPGRQ92834 1020 aaKnown RBP22.29■■□□□ 1.16
SPNS2-202ENST00000570641 PUS3Q9BZE2 481 aaKnown RBP22.29■■□□□ 1.16
SPNS2-202ENST00000570641 KLRG2A4D1S0 409 aaPredicted RBP22.28■■□□□ 1.16
SPNS2-202ENST00000570641 PDE6BP35913 854 aa22.28■■□□□ 1.16
SPNS2-202ENST00000570641 CRY2Q49AN0 593 aa22.28■■□□□ 1.16
SPNS2-202ENST00000570641 MTFR1LQ9H019 292 aa22.28■■□□□ 1.16
SPNS2-202ENST00000570641 BCL11AQ9H165 835 aa22.28■■□□□ 1.16
SPNS2-202ENST00000570641 CEP126Q9P2H0 1117 aa22.28■■□□□ 1.16
SPNS2-202ENST00000570641 TFCP2Q12800 502 aa22.27■■□□□ 1.16
SPNS2-202ENST00000570641 GPR108Q9NPR9 543 aa22.27■■□□□ 1.16
SPNS2-202ENST00000570641 RIPOR2Q9Y4F9 1068 aa22.27■■□□□ 1.16
SPNS2-202ENST00000570641 RBM17Q96I25 401 aaKnown RBP22.26■■□□□ 1.15
SPNS2-202ENST00000570641 MROH5Q6ZUA9 1318 aa22.26■■□□□ 1.15
SPNS2-202ENST00000570641 POLD1P28340 1107 aa22.25■■□□□ 1.15
SPNS2-202ENST00000570641 RPS8P62241 208 aaKnown RBP22.25■■□□□ 1.15
SPNS2-202ENST00000570641 METTL24Q5JXM2 366 aa22.25■■□□□ 1.15
SPNS2-202ENST00000570641 C16orf71Q8IYS4 520 aaPredicted RBP22.25■■□□□ 1.15
SPNS2-202ENST00000570641 A0A1B0GUL6 1792 aa22.25■■□□□ 1.15
SPNS2-202ENST00000570641 ZBTB7AO95365 584 aa22.24■■□□□ 1.15
SPNS2-202ENST00000570641 IFIT2P09913 472 aaKnown RBP22.24■■□□□ 1.15
SPNS2-202ENST00000570641 HOXA10P31260 410 aaPredicted RBP22.24■■□□□ 1.15
SPNS2-202ENST00000570641 GRAPQ13588 217 aa22.24■■□□□ 1.15
SPNS2-202ENST00000570641 GRAPLQ8TC17 118 aaPredicted RBP22.24■■□□□ 1.15
SPNS2-202ENST00000570641 BSDC1Q9NW68 430 aaPredicted RBP22.24■■□□□ 1.15
SPNS2-202ENST00000570641 AKAP2Q9Y2D5 859 aa22.24■■□□□ 1.15
SPNS2-202ENST00000570641 COL4A1P02462 1669 aa22.23■■□□□ 1.15
SPNS2-202ENST00000570641 COL11A2P13942 1736 aaPredicted RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms