RNA–Protein interactions for RNA: ENST00000570300.1

NPLOC4-203, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-203ENST00000570300 JARID2Q92833 1246 aaPredicted RBP13.54□□□□□ -0.24
NPLOC4-203ENST00000570300 ARHGEF1Q92888 912 aaKnown RBP13.54□□□□□ -0.24
NPLOC4-203ENST00000570300 PA2G4Q9UQ80 394 aaKnown RBP13.54□□□□□ -0.24
NPLOC4-203ENST00000570300 RBM19Q9Y4C8 960 aaKnown RBP13.54□□□□□ -0.24
NPLOC4-203ENST00000570300 EIF5BO60841 1220 aaKnown RBP13.53□□□□□ -0.24
NPLOC4-203ENST00000570300 IL15P40933 162 aaPredicted RBP13.53□□□□□ -0.24
NPLOC4-203ENST00000570300 CTSWP56202 376 aa13.53□□□□□ -0.24
NPLOC4-203ENST00000570300 OTUD7AQ8TE49 926 aaPredicted RBP13.53□□□□□ -0.24
NPLOC4-203ENST00000570300 TTC41PQ6P2S7 1318 aa13.53□□□□□ -0.24
NPLOC4-203ENST00000570300 TUBGCP6Q96RT7 1819 aa13.53□□□□□ -0.24
NPLOC4-203ENST00000570300 EYA2O00167 538 aa13.52□□□□□ -0.25
NPLOC4-203ENST00000570300 APBB1O00213 710 aa13.52□□□□□ -0.25
NPLOC4-203ENST00000570300 GSPT1P15170 499 aaKnown RBP13.52□□□□□ -0.25
NPLOC4-203ENST00000570300 OS9Q13438 667 aaPredicted RBP13.52□□□□□ -0.25
NPLOC4-203ENST00000570300 CCDC57Q2TAC2 916 aa13.52□□□□□ -0.25
NPLOC4-203ENST00000570300 USPL1Q5W0Q7 1092 aa13.52□□□□□ -0.25
NPLOC4-203ENST00000570300 NYXQ9GZU5 481 aa13.52□□□□□ -0.25
NPLOC4-203ENST00000570300 ZNF219Q9P2Y4 722 aaPredicted RBP13.52□□□□□ -0.25
NPLOC4-203ENST00000570300 DDX60Q8IY21 1712 aaKnown RBP13.52□□□□□ -0.25
NPLOC4-203ENST00000570300 RIC1Q4ADV7 1423 aa13.51□□□□□ -0.25
NPLOC4-203ENST00000570300 APBA3O96018 575 aa13.51□□□□□ -0.25
NPLOC4-203ENST00000570300 RFC4P35249 363 aa13.51□□□□□ -0.25
NPLOC4-203ENST00000570300 IFIT5Q13325 482 aaKnown RBP13.51□□□□□ -0.25
NPLOC4-203ENST00000570300 ATG9AQ7Z3C6 839 aa13.51□□□□□ -0.25
NPLOC4-203ENST00000570300 AMIGO3Q86WK7 504 aa13.51□□□□□ -0.25
NPLOC4-203ENST00000570300 AKT1S1Q96B36 256 aa13.51□□□□□ -0.25
NPLOC4-203ENST00000570300 IL1RAPL2Q9NP60 686 aa13.51□□□□□ -0.25
NPLOC4-203ENST00000570300 ATF5Q9Y2D1 282 aaPredicted RBP13.51□□□□□ -0.25
NPLOC4-203ENST00000570300 LRP5O75197 1615 aa13.5□□□□□ -0.25
NPLOC4-203ENST00000570300 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.5□□□□□ -0.25
NPLOC4-203ENST00000570300 DSG3P32926 999 aa13.5□□□□□ -0.25
NPLOC4-203ENST00000570300 SF3B3Q15393 1217 aaKnown RBP13.5□□□□□ -0.25
NPLOC4-203ENST00000570300 RTL5Q5HYW3 569 aaPredicted RBP13.5□□□□□ -0.25
NPLOC4-203ENST00000570300 SYNE4Q8N205 404 aa13.5□□□□□ -0.25
NPLOC4-203ENST00000570300 FLAD1Q8NFF5 587 aa13.5□□□□□ -0.25
NPLOC4-203ENST00000570300 SETDB2Q96T68 719 aa13.5□□□□□ -0.25
NPLOC4-203ENST00000570300 TBC1D9BQ66K14 1250 aa13.49□□□□□ -0.25
NPLOC4-203ENST00000570300 KLHDC4Q8TBB5 520 aa13.49□□□□□ -0.25
NPLOC4-203ENST00000570300 PI4K2BQ8TCG2 481 aa13.49□□□□□ -0.25
NPLOC4-203ENST00000570300 EAF2Q96CJ1 260 aaPredicted RBP13.49□□□□□ -0.25
NPLOC4-203ENST00000570300 GPATCH3Q96I76 525 aa13.49□□□□□ -0.25
NPLOC4-203ENST00000570300 SRP68Q9UHB9 627 aaKnown RBP13.49□□□□□ -0.25
NPLOC4-203ENST00000570300 CARMIL3Q8ND23 1372 aa13.48□□□□□ -0.25
NPLOC4-203ENST00000570300 ANKRD18BA2A2Z9 1011 aa13.48□□□□□ -0.25
NPLOC4-203ENST00000570300 ERC2O15083 957 aa13.48□□□□□ -0.25
NPLOC4-203ENST00000570300 CDC45O75419 566 aa13.48□□□□□ -0.25
NPLOC4-203ENST00000570300 GLRX3O76003 335 aaKnown RBP13.48□□□□□ -0.25
NPLOC4-203ENST00000570300 IFIT2P09913 472 aaKnown RBP13.48□□□□□ -0.25
NPLOC4-203ENST00000570300 SDSP20132 328 aa13.48□□□□□ -0.25
NPLOC4-203ENST00000570300 ITGA6P23229 1130 aa13.48□□□□□ -0.25
NPLOC4-203ENST00000570300 CCDC152Q4G0S7 254 aa13.48□□□□□ -0.25
NPLOC4-203ENST00000570300 TNNI3KQ59H18 835 aa13.48□□□□□ -0.25
NPLOC4-203ENST00000570300 TPTE2Q6XPS3 522 aa13.48□□□□□ -0.25
NPLOC4-203ENST00000570300 TICAM2Q86XR7 235 aa13.48□□□□□ -0.25
NPLOC4-203ENST00000570300 SIL1Q9H173 461 aa13.48□□□□□ -0.25
NPLOC4-203ENST00000570300 GREM2Q9H772 168 aa13.48□□□□□ -0.25
NPLOC4-203ENST00000570300 ECHDC1Q9NTX5 307 aa13.48□□□□□ -0.25
NPLOC4-203ENST00000570300 CHMP3Q9Y3E7 222 aa13.48□□□□□ -0.25
NPLOC4-203ENST00000570300 FPGT-TNNI3KV9GXZ4 949 aa13.48□□□□□ -0.25
NPLOC4-203ENST00000570300 GYS1P13807 737 aa13.47□□□□□ -0.25
NPLOC4-203ENST00000570300 TM4SF1P30408 202 aa13.47□□□□□ -0.25
NPLOC4-203ENST00000570300 TFCP2Q12800 502 aa13.47□□□□□ -0.25
NPLOC4-203ENST00000570300 AACSQ86V21 672 aa13.47□□□□□ -0.25
NPLOC4-203ENST00000570300 NUTM1Q86Y26 1132 aa13.47□□□□□ -0.25
NPLOC4-203ENST00000570300 RIPOR2Q9Y4F9 1068 aa13.47□□□□□ -0.25
NPLOC4-203ENST00000570300 ATXN8OSP0DMR3 200 aa13.46□□□□□ -0.25
NPLOC4-203ENST00000570300 HCLS1P14317 486 aaPredicted RBP13.46□□□□□ -0.25
NPLOC4-203ENST00000570300 UPF1Q92900 1129 aaKnown RBP eCLIP13.46□□□□□ -0.25
NPLOC4-203ENST00000570300 CAMKK2Q96RR4 588 aa13.46□□□□□ -0.25
NPLOC4-203ENST00000570300 AKAP2Q9Y2D5 859 aa13.46□□□□□ -0.25
NPLOC4-203ENST00000570300 QSER1Q2KHR3 1735 aa13.46□□□□□ -0.25
NPLOC4-203ENST00000570300 NFIXQ14938 502 aa13.45□□□□□ -0.26
NPLOC4-203ENST00000570300 ERFEQ4G0M1 354 aa13.45□□□□□ -0.26
NPLOC4-203ENST00000570300 LRRC24Q50LG9 513 aa13.45□□□□□ -0.26
NPLOC4-203ENST00000570300 TBC1D9Q6ZT07 1266 aa13.45□□□□□ -0.26
NPLOC4-203ENST00000570300 NBPF5PQ86XG9 351 aaPredicted RBP13.45□□□□□ -0.26
NPLOC4-203ENST00000570300 ZNF594Q96JF6 807 aaPredicted RBP13.45□□□□□ -0.26
NPLOC4-203ENST00000570300 CEP126Q9P2H0 1117 aa13.45□□□□□ -0.26
NPLOC4-203ENST00000570300 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.45□□□□□ -0.26
NPLOC4-203ENST00000570300 ZNF609O15014 1411 aa13.45□□□□□ -0.26
NPLOC4-203ENST00000570300 MROH5Q6ZUA9 1318 aa13.44□□□□□ -0.26
NPLOC4-203ENST00000570300 PHF14O94880 888 aa13.44□□□□□ -0.26
NPLOC4-203ENST00000570300 ATP5JP18859 108 aa13.44□□□□□ -0.26
NPLOC4-203ENST00000570300 ZNF827Q17R98 1081 aa13.44□□□□□ -0.26
NPLOC4-203ENST00000570300 TAF7LQ5H9L4 462 aa13.44□□□□□ -0.26
NPLOC4-203ENST00000570300 LDHAL6AQ6ZMR3 332 aa13.44□□□□□ -0.26
NPLOC4-203ENST00000570300 SMIM5Q71RC9 77 aa13.44□□□□□ -0.26
NPLOC4-203ENST00000570300 VGLL2Q8N8G2 317 aa13.44□□□□□ -0.26
NPLOC4-203ENST00000570300 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.44□□□□□ -0.26
NPLOC4-203ENST00000570300 PUS3Q9BZE2 481 aaKnown RBP13.44□□□□□ -0.26
NPLOC4-203ENST00000570300 UPF2Q9HAU5 1272 aaKnown RBP13.44□□□□□ -0.26
NPLOC4-203ENST00000570300 DBNLQ9UJU6 430 aaKnown RBP13.44□□□□□ -0.26
NPLOC4-203ENST00000570300 ABCC12Q96J65 1359 aa13.44□□□□□ -0.26
NPLOC4-203ENST00000570300 EPB41L2O43491 1005 aaKnown RBP13.43□□□□□ -0.26
NPLOC4-203ENST00000570300 SEC24BO95487 1268 aa13.43□□□□□ -0.26
NPLOC4-203ENST00000570300 CASC1Q6TDU7 716 aa13.43□□□□□ -0.26
NPLOC4-203ENST00000570300 CCDC125Q86Z20 511 aa13.43□□□□□ -0.26
NPLOC4-203ENST00000570300 NLGN1Q8N2Q7 840 aa13.43□□□□□ -0.26
NPLOC4-203ENST00000570300 NLRP3Q96P20 1036 aa13.43□□□□□ -0.26
NPLOC4-203ENST00000570300 CDC5LQ99459 802 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms