RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 PDGFDQ9GZP0 370 aaPredicted RBP19.16■□□□□ 0.66
HERPUD1-219ENST00000570273 DCTPP1Q9H773 170 aa19.16■□□□□ 0.66
HERPUD1-219ENST00000570273 PARP3Q9Y6F1 533 aa19.16■□□□□ 0.66
HERPUD1-219ENST00000570273 CSF1RP07333 972 aa19.15■□□□□ 0.66
HERPUD1-219ENST00000570273 SLC16A10Q8TF71 515 aa19.15■□□□□ 0.66
HERPUD1-219ENST00000570273 CCDC152Q4G0S7 254 aa19.14■□□□□ 0.65
HERPUD1-219ENST00000570273 SLC10A5Q5PT55 438 aa19.14■□□□□ 0.65
HERPUD1-219ENST00000570273 TTLL11Q8NHH1 800 aa19.14■□□□□ 0.65
HERPUD1-219ENST00000570273 PA2G4Q9UQ80 394 aaKnown RBP19.14■□□□□ 0.65
HERPUD1-219ENST00000570273 EXOC6BQ9Y2D4 811 aa19.14■□□□□ 0.65
HERPUD1-219ENST00000570273 RIC1Q4ADV7 1423 aa19.13■□□□□ 0.65
HERPUD1-219ENST00000570273 SURF6O75683 361 aaKnown RBP19.13■□□□□ 0.65
HERPUD1-219ENST00000570273 RFX5P48382 616 aaPredicted RBP19.13■□□□□ 0.65
HERPUD1-219ENST00000570273 CCDC57Q2TAC2 916 aa19.13■□□□□ 0.65
HERPUD1-219ENST00000570273 GREM2Q9H772 168 aa19.13■□□□□ 0.65
HERPUD1-219ENST00000570273 MYH3P11055 1940 aa19.12■□□□□ 0.65
HERPUD1-219ENST00000570273 APBB1O00213 710 aa19.12■□□□□ 0.65
HERPUD1-219ENST00000570273 IFIT5Q13325 482 aaKnown RBP19.12■□□□□ 0.65
HERPUD1-219ENST00000570273 OS9Q13438 667 aaPredicted RBP19.12■□□□□ 0.65
HERPUD1-219ENST00000570273 TAF7LQ5H9L4 462 aa19.12■□□□□ 0.65
HERPUD1-219ENST00000570273 C3orf67Q6ZVT6 689 aa19.12■□□□□ 0.65
HERPUD1-219ENST00000570273 TNRC6CQ9HCJ0 1690 aaKnown RBP19.12■□□□□ 0.65
HERPUD1-219ENST00000570273 ITGA6P23229 1130 aa19.11■□□□□ 0.65
HERPUD1-219ENST00000570273 HSP90AB4PQ58FF6 505 aa19.11■□□□□ 0.65
HERPUD1-219ENST00000570273 KLHDC4Q8TBB5 520 aa19.11■□□□□ 0.65
HERPUD1-219ENST00000570273 NLRP3Q96P20 1036 aa19.11■□□□□ 0.65
HERPUD1-219ENST00000570273 SIL1Q9H173 461 aa19.11■□□□□ 0.65
HERPUD1-219ENST00000570273 COPRSQ9NQ92 184 aa19.11■□□□□ 0.65
HERPUD1-219ENST00000570273 RTL9Q8NET4 1388 aa19.11■□□□□ 0.65
HERPUD1-219ENST00000570273 NRXN2Q9P2S2 1712 aa19.11■□□□□ 0.65
HERPUD1-219ENST00000570273 ANKRD18BA2A2Z9 1011 aa19.1■□□□□ 0.65
HERPUD1-219ENST00000570273 PTPN12Q05209 780 aaKnown RBP19.1■□□□□ 0.65
HERPUD1-219ENST00000570273 SF3B3Q15393 1217 aaKnown RBP19.1■□□□□ 0.65
HERPUD1-219ENST00000570273 ZBTB47Q9UFB7 747 aaPredicted RBP19.1■□□□□ 0.65
HERPUD1-219ENST00000570273 PDZRN3Q9UPQ7 1066 aa19.1■□□□□ 0.65
HERPUD1-219ENST00000570273 NOP58Q9Y2X3 529 aaKnown RBP19.1■□□□□ 0.65
HERPUD1-219ENST00000570273 ZBTB7AO95365 584 aa19.09■□□□□ 0.65
HERPUD1-219ENST00000570273 G3BP1Q13283 466 aaKnown RBP eCLIP19.09■□□□□ 0.653e-10■■□□□ 13.1
HERPUD1-219ENST00000570273 ANKRD45Q5TZF3 282 aa19.09■□□□□ 0.65
HERPUD1-219ENST00000570273 RAB11FIP3O75154 756 aa19.08■□□□□ 0.65
HERPUD1-219ENST00000570273 NUCB1Q02818 461 aa19.08■□□□□ 0.65
HERPUD1-219ENST00000570273 ZNF594Q96JF6 807 aaPredicted RBP19.08■□□□□ 0.65
HERPUD1-219ENST00000570273 ERC1Q8IUD2 1116 aa19.08■□□□□ 0.64
HERPUD1-219ENST00000570273 MTFR1LQ9H019 292 aa19.08■□□□□ 0.64
HERPUD1-219ENST00000570273 CHD1LQ86WJ1 897 aa19.07■□□□□ 0.64
HERPUD1-219ENST00000570273 LRRCC1Q9C099 1032 aa19.07■□□□□ 0.64
HERPUD1-219ENST00000570273 SEC31BQ9NQW1 1179 aa19.07■□□□□ 0.64
HERPUD1-219ENST00000570273 EYA2O00167 538 aa19.06■□□□□ 0.64
HERPUD1-219ENST00000570273 SMARCA5O60264 1052 aaPredicted RBP19.06■□□□□ 0.64
HERPUD1-219ENST00000570273 KIF1BPQ96EK5 621 aa19.06■□□□□ 0.64
HERPUD1-219ENST00000570273 CDC5LQ99459 802 aaKnown RBP19.06■□□□□ 0.64
HERPUD1-219ENST00000570273 SGIP1Q9BQI5 828 aa19.06■□□□□ 0.64
HERPUD1-219ENST00000570273 BRIP1Q9BX63 1249 aa19.06■□□□□ 0.64
HERPUD1-219ENST00000570273 LNPKQ9C0E8 428 aa19.06■□□□□ 0.64
HERPUD1-219ENST00000570273 BCL11AQ9H165 835 aa19.06■□□□□ 0.64
HERPUD1-219ENST00000570273 DDX46Q7L014 1031 aaKnown RBP19.05■□□□□ 0.64
HERPUD1-219ENST00000570273 SKAP1Q86WV1 359 aa19.05■□□□□ 0.64
HERPUD1-219ENST00000570273 RHPN1Q8TCX5 695 aa19.05■□□□□ 0.64
HERPUD1-219ENST00000570273 RPGRQ92834 1020 aaKnown RBP19.05■□□□□ 0.64
HERPUD1-219ENST00000570273 ATF5Q9Y2D1 282 aaPredicted RBP19.05■□□□□ 0.64
HERPUD1-219ENST00000570273 CIAO1O76071 339 aa19.04■□□□□ 0.64
HERPUD1-219ENST00000570273 POLD1P28340 1107 aa19.04■□□□□ 0.64
HERPUD1-219ENST00000570273 IGHMBP2P38935 993 aaKnown RBP19.04■□□□□ 0.64
HERPUD1-219ENST00000570273 IL15P40933 162 aaPredicted RBP19.04■□□□□ 0.64
HERPUD1-219ENST00000570273 PTGER2P43116 358 aa19.04■□□□□ 0.64
HERPUD1-219ENST00000570273 PUS3Q9BZE2 481 aaKnown RBP19.04■□□□□ 0.64
HERPUD1-219ENST00000570273 CNNM1Q9NRU3 951 aa19.04■□□□□ 0.64
HERPUD1-219ENST00000570273 FBXO3Q9UK99 471 aa19.04■□□□□ 0.64
HERPUD1-219ENST00000570273 PDE6BP35913 854 aa19.03■□□□□ 0.64
HERPUD1-219ENST00000570273 CRY2Q49AN0 593 aa19.03■□□□□ 0.64
HERPUD1-219ENST00000570273 LRRC24Q50LG9 513 aa19.03■□□□□ 0.64
HERPUD1-219ENST00000570273 LDHAL6AQ6ZMR3 332 aa19.03■□□□□ 0.64
HERPUD1-219ENST00000570273 ANKRD18AQ8IVF6 992 aa19.03■□□□□ 0.64
HERPUD1-219ENST00000570273 C10orf71Q711Q0 1435 aa19.03■□□□□ 0.64
HERPUD1-219ENST00000570273 ANKRD31Q8N7Z5 1873 aa19.03■□□□□ 0.64
HERPUD1-219ENST00000570273 ATG9AQ7Z3C6 839 aa19.02■□□□□ 0.64
HERPUD1-219ENST00000570273 MPHOSPH8Q99549 860 aa19.02■□□□□ 0.64
HERPUD1-219ENST00000570273 SPON1Q9HCB6 807 aa19.02■□□□□ 0.64
HERPUD1-219ENST00000570273 IL1RAPL2Q9NP60 686 aa19.02■□□□□ 0.64
HERPUD1-219ENST00000570273 KLRG2A4D1S0 409 aaPredicted RBP19.01■□□□□ 0.63
HERPUD1-219ENST00000570273 SASH1O94885 1247 aa19.01■□□□□ 0.63
HERPUD1-219ENST00000570273 RGS3P49796 1198 aa19.01■□□□□ 0.63
HERPUD1-219ENST00000570273 RBM17Q96I25 401 aaKnown RBP19.01■□□□□ 0.63
HERPUD1-219ENST00000570273 COL4A1P02462 1669 aa19.01■□□□□ 0.63
HERPUD1-219ENST00000570273 PDE4AP27815 886 aa19■□□□□ 0.63
HERPUD1-219ENST00000570273 TFCP2Q12800 502 aa19■□□□□ 0.63
HERPUD1-219ENST00000570273 GRAPQ13588 217 aa19■□□□□ 0.63
HERPUD1-219ENST00000570273 GRAPLQ8TC17 118 aaPredicted RBP19■□□□□ 0.63
HERPUD1-219ENST00000570273 CELF1Q92879 486 aaKnown RBP19■□□□□ 0.63
HERPUD1-219ENST00000570273 METTL24Q5JXM2 366 aa19■□□□□ 0.63
HERPUD1-219ENST00000570273 CLASRPQ8N2M8 674 aaKnown RBP19■□□□□ 0.63
HERPUD1-219ENST00000570273 RPS8P62241 208 aaKnown RBP18.99■□□□□ 0.63
HERPUD1-219ENST00000570273 C2CD5Q86YS7 1000 aa18.99■□□□□ 0.63
HERPUD1-219ENST00000570273 CEP126Q9P2H0 1117 aa18.99■□□□□ 0.63
HERPUD1-219ENST00000570273 RIPOR2Q9Y4F9 1068 aa18.99■□□□□ 0.63
HERPUD1-219ENST00000570273 SPEF2Q9C093 1822 aa18.98■□□□□ 0.63
HERPUD1-219ENST00000570273 COL11A2P13942 1736 aaPredicted RBP18.98■□□□□ 0.63
HERPUD1-219ENST00000570273 NPR1P16066 1061 aa18.98■□□□□ 0.63
HERPUD1-219ENST00000570273 HOXA10P31260 410 aaPredicted RBP18.98■□□□□ 0.63
HERPUD1-219ENST00000570273 MROH5Q6ZUA9 1318 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms