RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 GRAPLQ8TC17 118 aaPredicted RBP27.48■■□□□ 1.99
PKD1-240ENST00000570253 CDHR2Q9BYE9 1310 aa27.47■■□□□ 1.99
PKD1-240ENST00000570253 TRPM7Q96QT4 1865 aa27.47■■□□□ 1.99
PKD1-240ENST00000570253 MYBBP1AQ9BQG0 1328 aaKnown RBP27.46■■□□□ 1.99
PKD1-240ENST00000570253 LAMB2P55268 1798 aa27.46■■□□□ 1.99
PKD1-240ENST00000570253 CXCL9Q07325 125 aa27.46■■□□□ 1.99
PKD1-240ENST00000570253 KIAA2012Q0VF49 1180 aa27.45■■□□□ 1.98
PKD1-240ENST00000570253 GRM1Q13255 1194 aa27.45■■□□□ 1.98
PKD1-240ENST00000570253 HDGFL1Q5TGJ6 251 aa27.45■■□□□ 1.98
PKD1-240ENST00000570253 CCDC146Q8IYE0 955 aa27.45■■□□□ 1.98
PKD1-240ENST00000570253 CAPNS2Q96L46 248 aa27.45■■□□□ 1.98
PKD1-240ENST00000570253 SLC51AQ86UW1 340 aa27.44■■□□□ 1.98
PKD1-240ENST00000570253 RUNDC1Q96C34 613 aa27.44■■□□□ 1.98
PKD1-240ENST00000570253 CHL1O00533 1208 aa27.43■■□□□ 1.98
PKD1-240ENST00000570253 HOXB7P09629 217 aa27.43■■□□□ 1.98
PKD1-240ENST00000570253 GMPSP49915 693 aaPredicted RBP27.43■■□□□ 1.98
PKD1-240ENST00000570253 PLBD2Q8NHP8 589 aa27.42■■□□□ 1.98
PKD1-240ENST00000570253 CHPF2Q9P2E5 772 aa27.42■■□□□ 1.98
PKD1-240ENST00000570253 DBF4Q9UBU7 674 aaPredicted RBP27.42■■□□□ 1.98
PKD1-240ENST00000570253 TLL2Q9Y6L7 1015 aa27.42■■□□□ 1.98
PKD1-240ENST00000570253 TRAF5O00463 557 aa27.41■■□□□ 1.98
PKD1-240ENST00000570253 HSPA8P11142 646 aaKnown RBP27.41■■□□□ 1.98
PKD1-240ENST00000570253 ANKRD13DQ6ZTN6 518 aa27.41■■□□□ 1.98
PKD1-240ENST00000570253 GPR101Q96P66 508 aaPredicted RBP27.41■■□□□ 1.98
PKD1-240ENST00000570253 RAD17O75943 681 aa27.4■■□□□ 1.98
PKD1-240ENST00000570253 CYP4F22Q6NT55 531 aa27.4■■□□□ 1.98
PKD1-240ENST00000570253 ZC3H15Q8WU90 426 aaKnown RBP27.4■■□□□ 1.98
PKD1-240ENST00000570253 H7C1D1 291 aa27.39■■□□□ 1.98
PKD1-240ENST00000570253 CELF2O95319 508 aaKnown RBP27.39■■□□□ 1.98
PKD1-240ENST00000570253 HYPKQ9NX55 129 aa27.39■■□□□ 1.98
PKD1-240ENST00000570253 FMR1Q06787 632 aaKnown RBP eCLIP27.38■■□□□ 1.97
PKD1-240ENST00000570253 HSP90B1P14625 803 aaKnown RBP27.37■■□□□ 1.97
PKD1-240ENST00000570253 KRT24Q2M2I5 525 aa27.37■■□□□ 1.97
PKD1-240ENST00000570253 CST9Q5W186 159 aa27.37■■□□□ 1.97
PKD1-240ENST00000570253 THSD7BQ9C0I4 1608 aa27.37■■□□□ 1.97
PKD1-240ENST00000570253 MAP2K2P36507 400 aa27.36■■□□□ 1.97
PKD1-240ENST00000570253 DDX10Q13206 875 aaKnown RBP27.36■■□□□ 1.97
PKD1-240ENST00000570253 WASHC4Q2M389 1173 aa27.36■■□□□ 1.97
PKD1-240ENST00000570253 CDC37L1Q7L3B6 337 aa27.36■■□□□ 1.97
PKD1-240ENST00000570253 EYA3Q99504 573 aa27.35■■□□□ 1.97
PKD1-240ENST00000570253 GLIS2Q9BZE0 524 aaPredicted RBP27.35■■□□□ 1.97
PKD1-240ENST00000570253 ZNF408Q9H9D4 720 aa27.35■■□□□ 1.97
PKD1-240ENST00000570253 CNOT7Q9UIV1 285 aaKnown RBP27.35■■□□□ 1.97
PKD1-240ENST00000570253 NSFL1CQ9UNZ2 370 aaKnown RBP27.35■■□□□ 1.97
PKD1-240ENST00000570253 TRIM35Q9UPQ4 493 aa27.35■■□□□ 1.97
PKD1-240ENST00000570253 C6orf229H3BNL8 230 aa27.34■■□□□ 1.97
PKD1-240ENST00000570253 FAM89AQ96GI7 184 aa27.34■■□□□ 1.97
PKD1-240ENST00000570253 HHIPL1Q96JK4 782 aa27.34■■□□□ 1.97
PKD1-240ENST00000570253 CFAP44Q96MT7 982 aa27.34■■□□□ 1.97
PKD1-240ENST00000570253 PGAP2Q9UHJ9 254 aa27.34■■□□□ 1.97
PKD1-240ENST00000570253 LRRC37AA6NMS7 1700 aa27.33■■□□□ 1.97
PKD1-240ENST00000570253 DDX60Q8IY21 1712 aaKnown RBP27.33■■□□□ 1.97
PKD1-240ENST00000570253 GOLGA2Q08379 1002 aa27.33■■□□□ 1.97
PKD1-240ENST00000570253 SF3B3Q15393 1217 aaKnown RBP27.33■■□□□ 1.97
PKD1-240ENST00000570253 SAPCD2Q86UD0 394 aa27.33■■□□□ 1.97
PKD1-240ENST00000570253 ISCA1Q9BUE6 129 aa27.33■■□□□ 1.97
PKD1-240ENST00000570253 TAF1P21675 1872 aa27.32■■□□□ 1.96
PKD1-240ENST00000570253 ATP5J2-PTCD1G3V325 749 aa27.32■■□□□ 1.96
PKD1-240ENST00000570253 CA12O43570 354 aa27.32■■□□□ 1.96
PKD1-240ENST00000570253 CALD1Q05682 793 aaKnown RBP27.32■■□□□ 1.96
PKD1-240ENST00000570253 ZNF428Q96B54 188 aa27.32■■□□□ 1.96
PKD1-240ENST00000570253 DUSP27Q5VZP5 1158 aa27.31■■□□□ 1.96
PKD1-240ENST00000570253 RIC3Q7Z5B4 369 aa27.31■■□□□ 1.96
PKD1-240ENST00000570253 MICALL2Q8IY33 904 aa27.31■■□□□ 1.96
PKD1-240ENST00000570253 DPF2Q92785 391 aa27.31■■□□□ 1.96
PKD1-240ENST00000570253 G3V3G9 751 aa27.3■■□□□ 1.96
PKD1-240ENST00000570253 IRS4O14654 1257 aaPredicted RBP27.3■■□□□ 1.96
PKD1-240ENST00000570253 DCAF8Q5TAQ9 597 aa27.3■■□□□ 1.96
PKD1-240ENST00000570253 CELF1Q92879 486 aaKnown RBP27.3■■□□□ 1.96
PKD1-240ENST00000570253 ABHD8Q96I13 439 aa27.3■■□□□ 1.96
PKD1-240ENST00000570253 CHMP4AQ9BY43 222 aa27.3■■□□□ 1.96
PKD1-240ENST00000570253 ADAMTS8Q9UP79 889 aa27.3■■□□□ 1.96
PKD1-240ENST00000570253 YDJCA8MPS7 323 aa27.29■■□□□ 1.96
PKD1-240ENST00000570253 RIMBP2O15034 1052 aa27.29■■□□□ 1.96
PKD1-240ENST00000570253 RPS12P25398 132 aaKnown RBP27.29■■□□□ 1.96
PKD1-240ENST00000570253 RTL5Q5HYW3 569 aaPredicted RBP27.29■■□□□ 1.96
PKD1-240ENST00000570253 TRPM4Q8TD43 1214 aa27.29■■□□□ 1.96
PKD1-240ENST00000570253 DBNDD1Q9H9R9 158 aa27.29■■□□□ 1.96
PKD1-240ENST00000570253 DUOX1Q9NRD9 1551 aa27.29■■□□□ 1.96
PKD1-240ENST00000570253 AOC2O75106 756 aa27.28■■□□□ 1.96
PKD1-240ENST00000570253 TRIM28Q13263 835 aaKnown RBP27.28■■□□□ 1.96
PKD1-240ENST00000570253 PSMD14O00487 310 aa27.27■■□□□ 1.96
PKD1-240ENST00000570253 HIRAP54198 1017 aaPredicted RBP27.27■■□□□ 1.96
PKD1-240ENST00000570253 ZBTB12Q9Y330 459 aaPredicted RBP27.27■■□□□ 1.96
PKD1-240ENST00000570253 ECE2O60344 883 aa27.26■■□□□ 1.95
PKD1-240ENST00000570253 RPS8P62241 208 aaKnown RBP27.26■■□□□ 1.95
PKD1-240ENST00000570253 ZC3H12CQ9C0D7 883 aaKnown RBP27.26■■□□□ 1.95
PKD1-240ENST00000570253 MBIPQ9NS73 344 aa27.26■■□□□ 1.95
PKD1-240ENST00000570253 BRPF1P55201 1214 aaPredicted RBP27.25■■□□□ 1.95
PKD1-240ENST00000570253 GNAI1P63096 354 aa27.25■■□□□ 1.95
PKD1-240ENST00000570253 GPSM2P81274 684 aa27.25■■□□□ 1.95
PKD1-240ENST00000570253 ZBTB38Q8NAP3 1195 aaPredicted RBP27.25■■□□□ 1.95
PKD1-240ENST00000570253 DCPSQ96C86 337 aaKnown RBP27.25■■□□□ 1.95
PKD1-240ENST00000570253 NOGQ13253 232 aa27.24■■□□□ 1.95
PKD1-240ENST00000570253 USP48Q86UV5 1035 aa27.24■■□□□ 1.95
PKD1-240ENST00000570253 DDX58O95786 925 aaKnown RBP27.23■■□□□ 1.95
PKD1-240ENST00000570253 HUNKP57058 714 aa27.23■■□□□ 1.95
PKD1-240ENST00000570253 CCDC152Q4G0S7 254 aa27.23■■□□□ 1.95
PKD1-240ENST00000570253 TBC1D10BQ4KMP7 808 aaPredicted RBP27.23■■□□□ 1.95
PKD1-240ENST00000570253 IFT57Q9NWB7 429 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms